EY649751

Overview
NameEY649751
Unique NameEY649751
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: AIG1_ARATH (Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.033e-34
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 2
Query:  290 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQDEELQYTVCRTCSG 625
            +VL+GRTGNGKSATGNSI+  K FK+   SSGVT  C     V  +G ++NVIDTPGL DLS  +EF+GKEIVKCL +A+ G+HA L+V SV    SQ+EE+  +  +   G
Sbjct:   45 IVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEGPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLSTLQVLFG 156          

HSP 2 Score: 45.4394 bits (106), Expect = 1.033e-34
Identity = 20/30 (66.67%), Postives = 23/30 (76.67%), Query Frame = 1
Query:  616 LFGKNVFDYMIVVFTGGDDLEDHXKTLEDF 705
            LFG  + DY+IVVFTGGD LED   TLED+
Sbjct:  154 LFGSKIVDYLIVVFTGGDVLEDDGMTLEDY 183          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: P2A03_ARATH (Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.983e-23
Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  284 RTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQDEELQYTVCRTCSGKMFL 637
            + +VL+GRTGNGKS+TGN++LG K FK+   + GVT  CEM    ++DG ++NVIDTPGL D     + +  EI+ CL MA +GIHA L+V S     S++EE      +   G   L
Sbjct:    6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQIL 123          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA4_HUMAN (GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.280e-19
Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = 2
Query:  269 PSNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVV 556
            P N +  +VL+G+TG GKSATGNSILGRK F +   +  +TK CE +++  K+ ++V V+DTPG+ D    +    KEI++C+ + + G HA L+V
Sbjct:   26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLV 120          

HSP 2 Score: 27.7202 bits (60), Expect = 2.280e-19
Identity = 11/29 (37.93%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  595 AVHRLPNLFGKNVFDYMIVVFTGGDDLED 681
            A  ++  +FG+    +MI++FT  DDL D
Sbjct:  133 ATEKILKMFGERARSFMILIFTRKDDLGD 161          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA4_RAT (GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.360e-17
Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 2
Query:  290 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVV 556
            +VLLG+TG GKS+TGNSILGRKAF +   +  +TK CE K   + DG+ + V+DTPG+ D         KEI +C+ + + G HA L+V
Sbjct:   33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCE-KGVSIWDGKELVVVDTPGIFDTEVPDADTQKEITRCVALTSPGPHALLLV 120          

HSP 2 Score: 26.1794 bits (56), Expect = 4.360e-17
Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  595 AVHRLPNLFGKNVFDYMIVVFTGGDDLED 681
            A  +L ++F K    +MI++ T  DDLED
Sbjct:  133 ATRKLLSMFEKKARRFMILLLTRKDDLED 161          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA4_MOUSE (GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.253e-15
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  290 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVV 556
            +VLLG+TG GKS+TGNSILG K F +   +  +TK CE + +   DG+ + V+DTPG+ D         +EI + + + + G HA L+V
Sbjct:   33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCEKRVSTW-DGKELVVVDTPGIFDTEVPDADTQREITRYVALTSPGPHALLLV 120          

HSP 2 Score: 28.4906 bits (62), Expect = 2.253e-15
Identity = 12/29 (41.38%), Postives = 19/29 (65.52%), Query Frame = 1
Query:  595 AVHRLPNLFGKNVFDYMIVVFTGGDDLED 681
            A  ++ ++FGK    +MI++ T  DDLED
Sbjct:  133 ATQKILDMFGKQARRFMILLLTRKDDLED 161          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA2_HUMAN (GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 5.145e-14
Identity = 39/107 (36.45%), Postives = 63/107 (58.88%), Query Frame = 2
Query:  272 SNGERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQDEE 592
            S  E  ++L+G+TG GKSA GNSIL ++AF++  GS  +TKTC        + ++V +IDTP +       E + KE+ +C  ++  G H  L+V  + +  SQD++
Sbjct:   19 SRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IIDTPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQ 124          

HSP 2 Score: 25.409 bits (54), Expect = 5.145e-14
Identity = 11/32 (34.38%), Postives = 20/32 (62.50%), Query Frame = 1
Query:  580 SR*RTAVHRLPNLFGKNVFDYMIVVFTGGDDL 675
            S+ + A  R+  +FG++   + IV+FT  +DL
Sbjct:  120 SQDQQAAQRVKEIFGEDAMGHTIVLFTHKEDL 151          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA8_HUMAN (GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.426e-13
Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 2
Query:  281 ERTVVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQDEE 592
            E  ++LLG+  +GKSATGN+ILG+  FK+      V K C+ ++ VL++ +VV VIDTP L    A +E   + I  CL ++   +HA L+V ++     +DEE
Sbjct:   10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPDLFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGHFTREDEE 112          

HSP 2 Score: 24.6386 bits (52), Expect = 2.426e-13
Identity = 13/33 (39.39%), Postives = 19/33 (57.58%), Query Frame = 1
Query:  607 LPNLFGKNVFDYMIVVFTGGDDLEDHXKTLEDF 705
            +  +FG     ++I+VFT  DDL D    L+DF
Sbjct:  117 IQQVFGAEARRHIIIVFTRKDDLGD--DLLQDF 147          

HSP 3 Score: 63.1586 bits (152), Expect = 1.220e-11
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 2
Query:  290 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPG---LXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQDE 589
            +VL+GR+G GKSATGNSILG   F +   +  VTKT +       DGQ V V+DTP    + D+      + +E+ +CL     G   F++VF + +   +D+
Sbjct:  441 IVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFNQMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQLGRFTEEDK 542          

HSP 4 Score: 27.7202 bits (60), Expect = 1.220e-11
Identity = 16/39 (41.03%), Postives = 23/39 (58.97%), Query Frame = 1
Query:  589 RTAVHRLPNLFGKNVFDYMIVVFTGGDDLEDHXKTLEDF 705
            +TAV +L  +FG +   Y I++FT  +DL      LEDF
Sbjct:  542 KTAVAKLEAIFGADFTKYAIMLFTRKEDL--GAGNLEDF 578          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA5_HUMAN (GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.480e-13
Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  290 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQD 586
            ++L+G+TG GKSATGNSILG+  F++   +  VT+TC++KT    +G+ V V+DTP + +  A ++ + K I  C  ++  G H  L+V  + +  +QD
Sbjct:   30 IILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQVKTGTW-NGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQLGRFTAQD 127          

HSP 2 Score: 23.0978 bits (48), Expect = 2.480e-13
Identity = 7/27 (25.93%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  595 AVHRLPNLFGKNVFDYMIVVFTGGDDL 675
            A+ ++  +FG     +++++FT  +DL
Sbjct:  130 AIRKVKEVFGTGAMRHVVILFTHKEDL 156          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA7_HUMAN (GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.187e-13
Identity = 39/113 (34.51%), Postives = 67/113 (59.29%), Query Frame = 2
Query:  290 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQDEELQYTVCRTCSGK 628
            +VL+G+TG+GKSAT N+ILG + F +   +  VTK C+ K +    G+ + V+DTPGL D     +   KEI +C+  +  G HA ++V  + + ++++E+    + +   GK
Sbjct:   11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQ-KASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGR-YTEEEQKTVALIKAVFGK 121          

HSP 2 Score: 24.6386 bits (52), Expect = 4.187e-13
Identity = 8/21 (38.10%), Postives = 16/21 (76.19%), Query Frame = 1
Query:  616 LFGKNVFDYMIVVFTGGDDLE 678
            +FGK+   +M+++FT  ++LE
Sbjct:  118 VFGKSAMKHMVILFTRKEELE 138          
BLAST of EY649751 vs. ExPASy Swiss-Prot
Match: GIMA5_MOUSE (GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 9.165e-13
Identity = 34/99 (34.34%), Postives = 60/99 (60.61%), Query Frame = 2
Query:  290 VVLLGRTGNGKSATGNSILGRKAFKASAGSSGVTKTCEMKTTVLKDGQVVNVIDTPGLXDLSAGSEFVGKEIVKCLGMANDGIHAFLVVFSVTKPFSQD 586
            ++L+G++G GKSATGNSIL R AF++      VT+T + +T    +G+ + V+DTP + +  A ++ + K+I  C  +   G H  L+V  + +  ++D
Sbjct:   29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAETGTW-EGRSILVVDTPPIFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQLGRFTAED 126          

HSP 2 Score: 32.3426 bits (72), Expect = 9.165e-13
Identity = 17/37 (45.95%), Postives = 25/37 (67.57%), Query Frame = 1
Query:  595 AVHRLPNLFGKNVFDYMIVVFTGGDDLEDHXKTLEDF 705
            AV  +  +FG  V  +MIV+FT  +DLE+  K+LE+F
Sbjct:  129 AVRMVKEVFGVGVMRHMIVLFTRKEDLEE--KSLEEF 163          
The following BLAST results are available for this feature:
BLAST of EY649751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
AIG1_ARATH1.033e-3454.46Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 ... [more]
P2A03_ARATH1.983e-2344.92Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabi... [more]
GIMA4_HUMAN2.280e-1943.75GTPase IMAP family member 4 OS=Homo sapiens GN=GIM... [more]
GIMA4_RAT4.360e-1747.19GTPase IMAP family member 4 OS=Rattus norvegicus G... [more]
GIMA4_MOUSE2.253e-1541.57GTPase IMAP family member 4 OS=Mus musculus GN=Gim... [more]
GIMA2_HUMAN5.145e-1436.45GTPase IMAP family member 2 OS=Homo sapiens GN=GIM... [more]
GIMA8_HUMAN2.426e-1339.42GTPase IMAP family member 8 OS=Homo sapiens GN=GIM... [more]
GIMA5_HUMAN2.480e-1338.38GTPase IMAP family member 5 OS=Homo sapiens GN=GIM... [more]
GIMA7_HUMAN4.187e-1334.51GTPase IMAP family member 7 OS=Homo sapiens GN=GIM... [more]
GIMA5_MOUSE9.165e-1334.34GTPase IMAP family member 5 OS=Mus musculus GN=Gim... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-B02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649751 ID=EY649751; Name=EY649751; organism=Citrus sinensis; type=EST; length=993bp
ACTTGTCCGGNAATTCCCGGCCGACCCACGCGTCCGTAACTTTCTATTTA
AACTCTCTTACATCTTTTACTTCTTGACTTTCTATTACATTCATTACTCA
ATTTATAAATTTCATACCTTAAATCCTAAAATTTAAATAAAGTCTCTTCC
CCTTTCTCATCTCTTCATACGCAATGCAGTCTTTTTAGTTCTCCTCTCTT
TGCAAGTAAATTGAATTTTTTTAAGGATGGGAGAAAGAGTGGTTGATGGC
GATTGGAAGCCTACTTCTCCATCTAATGGGGAGCGCACTGTAGTTTTACT
TGGCCGTACTGGCAATGGCAAAAGTGCGACGGGCAATAGTATTCTCGGAA
GAAAAGCCTTCAAGGCGAGTGCTGGCTCGTCTGGTGTTACTAAAACTTGT
GAAATGAAGACAACCGTGCTCAAAGATGGCCAAGTTGTTAATGTCATTGA
TACCCCCGGACTTTNTGATTTGTCTGCTGGCTCTGAGTTTGTCGGCAAGG
AAATTGTCAAATGTCTCGGTATGGCCAATGATGGCATCCATGCATTCCTT
GTAGTTTTCTCTGTTACAAAACCGTTTTCTCAAGATGAAGAACTGCAGTA
CACCGTTTGCCGAACTTGTTCGGGAAAAATGTTTTTGACTATATGATTGT
TGTTTTCACTGGAGGGGATGATCTTGAAGATCATGANAAAACATTAGAAG
ATTTTTGGGTCATGAGTGTCCAAAGCCCTTAATGGAANTNCTTCACTATG
TGATATAGGTGCGTGCTTTTTGATACCAGACCAATGATGATGCCCATAGA
CCGAGCAGTGTGGCAACTTNCTTCTCTGGTAACTCTGGGATCGGCAGAAT
GGTGGCAACCATATACGACGAGTTGAAGTGGACTCGTACTACCGGGAAGA
CTCTGTGCTGCTTCTTCTGATATGCATGACATATCNNCTTTTCTTTTTTC
ACCCAAAAGGGGCTCTGAACCCGGGATAAAAACTGAGTTGATC
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