EY649748

Overview
NameEY649748
Unique NameEY649748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY649748 vs. ExPASy Swiss-Prot
Match: PAP11_ARATH (Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.115e-79
Identity = 141/195 (72.31%), Postives = 161/195 (82.56%), Query Frame = 2 
Query:   65 RRVHNHASRITCSSTTNQSQSAKQELLNLIADQDRGLKTQKDPNKRSSIIKAIDDMAVLGSDMDTTGDSLSATWRLLWTTEKEQLFIIEKAYLFGTQTGDVLQVIDVEKKVLNNVITFPPDGVFFVRSNIEIASPQRVNFMFTSAVLRGRNWEVPLPPFGKGWFETVYLDDEIRVVKDIRGDYLVVERAPYQWTE 649
            RR      R +CS   N +Q AK++LL LI+++DRGL+TQKDP KR  I+ AI+ M V+G    TT DSLSATWRLLWTTEKEQLFIIEKA LFGT  GDVLQVIDV K++LNNVITFPPDGVFFVRS+I+IASPQRVNF F SAVLRG+NWE+PLPPFGKGWFE VY+D EIRV KDIRGDYL+V+RAPY WTE
Sbjct:   15 RRTRRAGFRTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDDSLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRSDIDIASPQRVNFRFNSAVLRGKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDRAPYNWTE 209
The following BLAST results are available for this feature:
BLAST of EY649748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAP11_ARATH2.115e-7972.31Probable plastid-lipid-associated protein 11, chlo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-A10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649748 ID=EY649748; Name=EY649748; organism=Citrus sinensis; type=EST; length=879bp
CTTTCTACTACTCCCCATTTCTTTGAATGTTCCTAATTGTAACGCTAATT
CTTCTAAACGCCAACGACGAGTTCATAATCATGCCTCTAGAATTACATGC
TCGTCCACCACTAACCAATCGCAATCAGCCAAGCAAGAACTCCTAAACCT
CATCGCAGACCAAGACCGAGGACTCAAAACTCAGAAAGATCCTAACAAGC
GATCCTCAATCATCAAAGCGATCGACGATATGGCTGTTCTGGGCAGCGAT
ATGGACACCACCGGTGATTCGCTATCTGCCACGTGGCGCTTGCTCTGGAC
CACGGAGAAAGAGCAACTATTCATCATTGAGAAAGCCTACTTGTTTGGTA
CACAAACCGGTGACGTCCTGCAGGTGATTGATGTTGAGAAAAAGGTTCTC
AATAATGTAATTACTTTTCCTCCCGATGGAGTTTTCTTTGTGAGGTCCAA
TATTGAGATTGCTTCGCCTCAACGAGTGAATTTCATGTTTACAAGCGCAG
TTCTACGTGGGAGAAATTGGGAAGTACCATTGCCACCGTTTGGGAAAGGC
TGGTTTGAAACTGTGTACCTTGATGATGAGATTCGAGTTGTGAAGGACAT
CAGGGGAGACTATTTAGTCGTTGAACGCGCTCCTTATCAGTGGACAGAGT
GATGAACGAAGCTTTTGCTCTACTTAGTTGAATCAATTCTACTTTCAACC
ATTGATTTGTTTGCTCACATGTATCTATGTATATATGAGGTAAAAAAGTT
CACCTCAATGCCTCTAATGTCTAACGTTNNTCTCTGAAACTAGATTTAGA
ACTTTTGTGGTATGTAATTTAAAGTGACTCTCCCCTATTTTCTGGCCTCG
TTTTTTTTTTTTTTTTTTACCCCTCATCA
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