EY649740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.704e-42 Identity = 100/174 (57.47%), Postives = 116/174 (66.67%), Query Frame = 2 Query: 386 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFASL-----IY**YXG**FX*VAASV------WD*F*EEYEKGIDWNRFGELFESSGIV*ME-LSVGHRS*GLEFGYLL 871 D I IREVW+ NL EEFALIREIVDK++YIAMDTEFPGVVL+PV FK ND NY+TL +NVD+LKLIQ+GLTFSDENGNLPTCGT +FCIWQF F IY + S+ F + EKGID RFGEL SSGIV + +S G +FGYL+ Sbjct: 8 DSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIY----------ASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLV 171
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 5.873e-38 Identity = 95/167 (56.89%), Postives = 111/167 (66.47%), Query Frame = 2 Query: 386 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGT-XQFCIWQFTFA--SLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*MELS--VGHRS*GLEFGYLL 871 D IQIREVWNDNLE E ALIRE+VD + ++AMDTEFPG+V RPVG FK +Y+Y+TL NV++LK+IQLGLTFSDE GNLPTCGT ++CIWQF F L Y + S D F + E GID RF EL SSGIV E V S G +FGYLL Sbjct: 8 DSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGID-FVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHS-GYDFGYLL 172
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.972e-37 Identity = 92/176 (52.27%), Postives = 112/176 (63.64%), Query Frame = 2 Query: 386 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFA------------SLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*MELS--VGHRS*GLEFGYLL 871 D IQIREVWNDNL+EE LIR++VD + Y+AMDTEFPG+V+RPVG FK+ DY+Y+TL NV++LK+IQLGLTFS+E GNLPTCGT ++CIWQF F S+ G +A + D GID RF EL SSGIV E V S G +FGYLL Sbjct: 8 DSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSG---IDLAKNTLD--------GIDSKRFAELLMSSGIVLNENVHWVTFHS-GYDFGYLL 171
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.954e-31 Identity = 83/171 (48.54%), Postives = 104/171 (60.82%), Query Frame = 2 Query: 386 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNIN------DYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFA--SLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*ME-LSVGHRS*GLEFGYLL 871 D I+IREVWN NLE+E ALI + +D + Y+AMDTEFPG+V + V A N N +YNY TL NV+MLKLIQLGLT SDE GNLPTCGT + CIWQF F ++I + + S D + E G+D RF EL SG+V + + G +FGYLL Sbjct: 12 DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAID-LEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLL 181
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CNOT7_XENLA (CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.270e-24 Identity = 72/163 (44.17%), Postives = 95/163 (58.28%), Query Frame = 2 Query: 395 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFASLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*ME----LSVGHRS*GLEFGYLL 871 +I EVW NL+++ IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L NVD+LK+IQLGLTF +E G P GT WQF F + + S F + E+GI+ F ELF +SG+V E LS G +FGYL+ Sbjct: 11 RICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GT---STWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHS---GYDFGYLI 166
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.270e-24 Identity = 73/174 (41.95%), Postives = 100/174 (57.47%), Query Frame = 2 Query: 398 IREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFA-SLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*ME--LSVGHRS*GLEFGYLLSGDLPGYPIPTGF 910 IR+VW+ NL++E LI ++++Y ++MDTEFPGVV RP+G FK+ +DY+YQTL NVD LK+IQ+GL SDE GN P + C WQF F +L Y + S D F + E GI+ F EL SG+V E + S G +F YLL + P+P + Sbjct: 22 IRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDYHYQTLRANVDSLKIIQIGLALSDEEGNAPV----EACTWQFNFTFNLQDDMYAPESIELLTKSGID-FKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHS-GYDFAYLLKA-MTQIPLPAEY 188
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CNOT7_XENTR (CCR4-NOT transcription complex subunit 7 OS=Xenopus tropicalis GN=cnot7 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.659e-24 Identity = 72/163 (44.17%), Postives = 95/163 (58.28%), Query Frame = 2 Query: 395 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFASLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*ME----LSVGHRS*GLEFGYLL 871 +I EVW NL+++ IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L NVD+LK+IQLGLTF +E G P GT WQF F + + S F + E+GI+ F ELF +SG+V E LS G +FGYL+ Sbjct: 11 RICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFVNEQGEYPP-GT---STWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHS---GYDFGYLI 166
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.167e-24 Identity = 73/162 (45.06%), Postives = 94/162 (58.02%), Query Frame = 2 Query: 398 IREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFASLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*ME----LSVGHRS*GLEFGYLL 871 I EVW NLEEE IREIV Y+YIAMDTEFPGVV+RP+G F++ DY YQ L NVD+LK+IQLGLTF++E G P+ WQF F + + A+ F + E+GID F EL +SG+V + LS G +FGY++ Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS----GINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHS---GYDFGYMV 166
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.167e-24 Identity = 73/162 (45.06%), Postives = 94/162 (58.02%), Query Frame = 2 Query: 398 IREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFASLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*ME----LSVGHRS*GLEFGYLL 871 I EVW NLEEE IREIV Y+YIAMDTEFPGVV+RP+G F++ DY YQ L NVD+LK+IQLGLTF++E G P+ WQF F + + A+ F + E+GID F EL +SG+V + LS G +FGY++ Sbjct: 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS----GINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHS---GYDFGYMV 166
BLAST of EY649740 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.830e-24 Identity = 72/163 (44.17%), Postives = 94/163 (57.67%), Query Frame = 2 Query: 395 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLNDNVDMLKLIQLGLTFSDENGNLPTCGTXQFCIWQFTFASLIY**YXG**FX*VAASVWD*F*EEYEKGIDWNRFGELFESSGIV*ME----LSVGHRS*GLEFGYLL 871 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L NVD+LK+IQLGLTF +E G P GT WQF F + + + F + E+GI+ F EL +SG+V E LS G +FGYL+ Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GT---STWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHS---GYDFGYLI 166 The following BLAST results are available for this feature:
BLAST of EY649740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649740 ID=EY649740; Name=EY649740; organism=Citrus sinensis; type=EST; length=943bpback to top |