EY649732 | Citrus Genome Database

Overview


Name	EY649732
Unique Name	EY649732
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	854

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
EY649732_ssr171	microsatellite	EY649732_ssr171:171..182.	BLAST: Citrus ESTs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_SYNS3 (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain CC9311) GN=rlmN PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 9.531e-41
Identity = 79/162 (48.77%), Postives = 107/162 (66.05%), Query Frame = 1

Query:  205 NVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            + LLG S+ EL++ AV  GQ ++RG+QLH  +Y + V++++    LP+++R  LQ  G +VGRL       +AD T KLL+  ED   +ETVGIP +      RLT CVSSQVGCP+ C FCATGKGG  R+L+ HEIV QVL+I E+ +    +VVFMG G
Sbjct:    3 SALLGRSKSELEEWAVAQGQPAFRGRQLHDWLYAKGVRDLQGITVLPKAWRASLQNEGVSVGRLHEQERRVSADATTKLLLGTEDGETLETVGIPTDQ-----RLTVCVSSQVGCPMACRFCATGKGGLQRSLAGHEIVAQVLSIREVMERRPSHVVFMGMG 159

HSP 2 Score: 30.0314 bits (66), Expect = 9.531e-41
Identity = 11/20 (55.00%), Postives = 17/20 (85.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN+++VL+   CL+
Sbjct:  157 GMGEPLLNIEAVLESIRCLN 176

HSP 3 Score: 23.8682 bits (50), Expect = 9.531e-41
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 3

Query:  747 DVQIGQRMIYIPLWGVPNTIKNWA 818
            D+ IGQR I +   GVP+T+   A
Sbjct:  178 DLGIGQRRITVSTVGVPHTLPRLA 201

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_SYNPX (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain WH8102) GN=rlmN PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.540e-40
Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 1

Query:  208 VLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            +LLG S  EL+  AV  GQ+ +RG+QLH  +Y +  + +     LP+++R  L+E G  VGRL       AAD T KLL+  +D   IETVGIP +      RLT CVSSQVGCP+ C FCATGKGG  R+L +HEIV QVL++ E+      ++VFMG G
Sbjct:    1 MLLGRSAAELESWAVAQGQKPFRGRQLHDWLYAKGARSLSEITVLPKAWRESLKEDGVEVGRLKEVHRSVAADATTKLLLSTDDGETIETVGIPTDQ-----RLTVCVSSQVGCPMACRFCATGKGGLQRSLRTHEIVDQVLSVREVMDRRPSHIVFMGMG 156

HSP 2 Score: 30.0314 bits (66), Expect = 3.540e-40
Identity = 12/20 (60.00%), Postives = 16/20 (80.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN ++VLD   CL+
Sbjct:  154 GMGEPLLNSQAVLDAIRCLN 173

HSP 3 Score: 25.7942 bits (55), Expect = 3.540e-40
Identity = 14/34 (41.18%), Postives = 17/34 (50.00%), Query Frame = 3

Query:  747 DVQIGQRMIYIPLWGVPNTIKNWALTTSVTLASA 848
            D+ IGQR I +   GVP T+   A     TL  A
Sbjct:  175 DLGIGQRRITVSTVGVPKTLPQLAELALATLGRA 208

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_PROMT (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain NATL2A) GN=rlmN PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.977e-40
Identity = 74/171 (43.27%), Postives = 111/171 (64.91%), Query Frame = 1

Query:  181 SRAPRVDANV-LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            ++ P++ +N  LLG+S ++L++ A   G++S+RG+Q+H  IY+R  K +++   LP+ +R+ L   G  +GRL     V A D T+KLL+   D  ++ETVGIP +      RLT CVSSQ+GCP+ C FCATGKGG +R+L  +EIV QV+++ E       +VVFMG G
Sbjct:    2 TKLPKLSSNSSLLGLSSEDLEEFARQEGEKSFRGRQIHEWIYQRGAKSLDSISVLPKKWRDSLVRKGIQIGRLDEINRVVAEDETLKLLMGTFDGEIVETVGIPTD-----KRLTVCVSSQIGCPMGCKFCATGKGGLNRSLDVNEIVDQVISVRETMNRRPTHVVFMGMG 167

HSP 2 Score: 31.5722 bits (70), Expect = 5.977e-40
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCL 739
            GMGEP+LN+++VLD   CL
Sbjct:  165 GMGEPLLNIRNVLDSIECL 183

HSP 3 Score: 27.335 bits (59), Expect = 5.977e-40
Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 3

Query:  717 CLTXXDVWIKDVQIGQRMIYIPLWGVPNTIKNWA 818
            CLT       D+ IGQR I +   G+PNT+ + A
Sbjct:  182 CLT------SDIGIGQRKITVSTVGIPNTLSDLA 209

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_PROM1 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain NATL1A) GN=rlmN PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.771e-40
Identity = 74/171 (43.27%), Postives = 111/171 (64.91%), Query Frame = 1

Query:  181 SRAPRVDANV-LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            ++ P++ +N  LLG+S ++L++ A   G++S+RG+Q+H  IY+R  K +++   LP+ +R+ L   G  +GRL     V A D T+KLL+   D  ++ETVGIP +      RLT CVSSQ+GCP+ C FCATGKGG +R+L  +EIV QV+++ E       +VVFMG G
Sbjct:    2 TKLPKLSSNSSLLGLSSEDLEEFARQEGEKSFRGRQIHEWIYQRGAKSLDSISVLPKKWRDSLVRKGIQIGRLDEINRVVAEDETLKLLMGTFDGEIVETVGIPTD-----KRLTVCVSSQIGCPMGCKFCATGKGGLNRSLDVNEIVDQVISVRETMNRRPTHVVFMGMG 167

HSP 2 Score: 31.187 bits (69), Expect = 7.771e-40
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCL 739
            GMGEP+LN+++VLD   CL
Sbjct:  165 GMGEPLLNIQNVLDSIECL 183

HSP 3 Score: 27.335 bits (59), Expect = 7.771e-40
Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 3

Query:  717 CLTXXDVWIKDVQIGQRMIYIPLWGVPNTIKNWA 818
            CLT       D+ IGQR I +   G+PNT+ + A
Sbjct:  182 CLT------SDIGIGQRKITVSTVGIPNTLSDLA 209

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_PROM4 (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus (strain MIT 9211) GN=rlmN PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.220e-39
Identity = 76/161 (47.20%), Postives = 104/161 (64.60%), Query Frame = 1

Query:  208 VLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            VLLG +  +L+KLA + G+ ++RG+Q+H  +Y++ V+++E    LP+ +R  L + G   GRL   + + A DGT+KLL++  D   IE VGIP        RLT CVSSQVGC + C FCATGKGGF R+L  HEIV QVL+I E F     ++VFMG G
Sbjct:   12 VLLGQNVAKLEKLAQEYGEPAFRGRQIHEWLYQKGVRKLEEISVLPKLWRTTLSDQGVCTGRLEEVKRLVANDGTIKLLLETSDRESIEAVGIPTNS-----RLTTCVSSQVGCSMGCRFCATGKGGFQRSLEVHEIVDQVLSIREAFDRRPSHIVFMGMG 167

HSP 2 Score: 31.187 bits (69), Expect = 2.220e-39
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN++SVL+   CL+
Sbjct:  165 GMGEPLLNIESVLESISCLN 184

HSP 3 Score: 22.3274 bits (46), Expect = 2.220e-39
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 3

Query:  747 DVQIGQRMIYIPLWGVPNTIKNWA 818
            D+ IGQR I +   GV NT+   A
Sbjct:  186 DLGIGQRRITVSTVGVVNTLPQLA 209

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_SYNS9 (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain CC9902) GN=rlmN PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.221e-39
Identity = 77/162 (47.53%), Postives = 102/162 (62.96%), Query Frame = 1

Query:  205 NVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            NVLLG S  EL+  AV  G +S+RG+Q+H  +Y + VK +     LP+ +R +L+   + VGRL +     AAD T KLL+  +D   IETVGIP +      RLT C+SSQVGCP+ C FCATGK G  R+L++HEIV QVL++ E       +VVFMG G
Sbjct:    3 NVLLGRSAAELEDWAVAQGHKSFRGRQIHDWLYNKGVKSLSEISALPKQWRTELEAQTFRVGRLKLVHQSVAADATTKLLLATDDGETIETVGIPTD-----QRLTVCISSQVGCPMACRFCATGKSGLQRSLATHEIVDQVLSVREAMDRRPSHVVFMGMG 159

HSP 2 Score: 28.4906 bits (62), Expect = 2.221e-39
Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN ++VL+   CL+
Sbjct:  157 GMGEPLLNSEAVLETIRCLN 176

HSP 3 Score: 23.483 bits (49), Expect = 2.221e-39
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 3

Query:  747 DVQIGQRMIYIPLWGVPNTIKNWA 818
            D+ IGQR I +   GVP T+   A
Sbjct:  178 DLGIGQRRITVSTVGVPKTLPQLA 201

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_SYNPW (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain WH7803) GN=rlmN PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.221e-39
Identity = 74/163 (45.40%), Postives = 104/163 (63.80%), Query Frame = 1

Query:  202 ANVLLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            +  LLG+   EL++ AV  GQ ++RG+QLH  +Y +   ++++   LP+++R  LQ+ G  +GRL       A D T KLL+  +D   +ETVGIP +      RLT CVSSQVGCP+ C FCATGKGG  R+L +HEIV QVL++ E+ +    +VVFMG G
Sbjct:    7 SKTLLGLGASELERWAVSQGQSAFRGRQLHDWLYAKGACDLQDITVLPKAWRASLQDKGVIIGRLKEQDRKVAGDATTKLLLGTDDGETLETVGIPTDQ-----RLTVCVSSQVGCPMACRFCATGKGGLQRSLYTHEIVAQVLSVREVMERRPSHVVFMGMG 164

HSP 2 Score: 31.5722 bits (70), Expect = 2.221e-39
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN+++VLD   CL+
Sbjct:  162 GMGEPLLNIEAVLDAIRCLN 181

HSP 3 Score: 23.483 bits (49), Expect = 2.221e-39
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 3

Query:  747 DVQIGQRMIYIPLWGVPNTIKNWA 818
            D+ IGQR I +   GVP T+   A
Sbjct:  183 DLGIGQRRITVSTVGVPRTLPRLA 206

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_SYNSC (Ribosomal RNA large subunit methyltransferase N OS=Synechococcus sp. (strain CC9605) GN=rlmN PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.977e-38
Identity = 79/160 (49.38%), Postives = 98/160 (61.25%), Query Frame = 1

Query:  211 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            LLG S  ELQ  AV  GQ+ +RG+QLH  IY +  + + +    P+++R  L EAG  VGRL       A D T KLL+  ED   IETVGIP +      RLT CVSSQVGCP+ C FCATGKGG  R+L +HEIV QVL++ E       ++VFMG G
Sbjct:    5 LLGRSAAELQDWAVAQGQKPFRGRQLHDWIYAKGARSLADITVFPKTWRAALVEAGVDVGRLKEVHHSVATDATTKLLLSTEDGETIETVGIPTDQ-----RLTVCVSSQVGCPMACRFCATGKGGLQRSLQTHEIVDQVLSVREAMDRRPSHIVFMGMG 159

HSP 2 Score: 28.1054 bits (61), Expect = 3.977e-38
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN  +VL+   CL+
Sbjct:  157 GMGEPLLNSSAVLEAIRCLN 176

HSP 3 Score: 23.483 bits (49), Expect = 3.977e-38
Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 3

Query:  747 DVQIGQRMIYIPLWGVPNTIKNWA 818
            D+ IGQR I +   GVP T+   A
Sbjct:  178 DLGIGQRRITVSTVGVPKTLPQLA 201

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_PROMA (Ribosomal RNA large subunit methyltransferase N OS=Prochlorococcus marinus GN=rlmN PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 8.736e-38
Identity = 74/160 (46.25%), Postives = 103/160 (64.38%), Query Frame = 1

Query:  211 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            LLG+   +L++LA+D G+  YRG+QLH  +Y++ V  +++   LP+++RN L + G +VG L       A D T+KLL+   D  +IETVGIP  +     RLT CVSSQ+GCP+ C FCATGK G  R+L  +EIV QV A+++ F     NVVFMG G
Sbjct:    8 LLGLDLSQLERLALDHGESLYRGRQLHQWLYQKGVDNLDDITVLPKAWRNSLIQKGISVGGLVEVNRFIAGDRTIKLLLSTGDGEIIETVGIPSGN-----RLTICVSSQIGCPMGCQFCATGKDGLKRSLKVNEIVAQVFAVKKAFNRSPSNVVFMGMG 162

HSP 2 Score: 28.8758 bits (63), Expect = 8.736e-38
Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN++ VL    CL+
Sbjct:  160 GMGEPLLNIEEVLSSICCLN 179

HSP 3 Score: 24.6386 bits (52), Expect = 8.736e-38
Identity = 12/25 (48.00%), Postives = 15/25 (60.00%), Query Frame = 3

Query:  744 KDVQIGQRMIYIPLWGVPNTIKNWA 818
            KD+ IGQR I +   GV NT+   A
Sbjct:  180 KDLGIGQRRITVSTVGVKNTLPQLA 204

[Close]

BLAST of EY649732 vs. ExPASy Swiss-Prot
Match: RLMN_MICAN (Ribosomal RNA large subunit methyltransferase N OS=Microcystis aeruginosa (strain NIES-843) GN=rlmN PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.244e-37
Identity = 79/160 (49.38%), Postives = 100/160 (62.50%), Query Frame = 1

Query:  211 LLGMSEQELQKLAVDLGQQSYRGKQLHHLIYKRKVKEIENFIQLPQSFRNDLQEAGWTVGRLPIFRTVTAADGTVKLLIKLEDNRLIETVGIPVEDEKGPMRLTACVSSQVGCPLRCSFCATGKGGFSRNLSSHEIVGQVLAIEEIFKHXGDNVVFMGNG 690
            LL  S +EL     D GQ +YRGKQLH  +Y++ V  + +    PQ +R+ +  A + +GR  I     A D T K L+KL D  +IE VGIP E      RLT CVSSQVGCP+ C FCATGKGGF+RNL +HEIV QVL ++E F+    +VVFMG G
Sbjct:    3 LLAKSLEELTDWVKDQGQPAYRGKQLHQWLYEKGVHSLADISVFPQEWRSKM--ADYPIGRSLIHYRSVAPDRTRKYLLKLADGLIIEAVGIPSEK-----RLTVCVSSQVGCPMACDFCATGKGGFTRNLKAHEIVDQVLTVQEDFQQRVSHVVFMGMG 155

HSP 2 Score: 26.5646 bits (57), Expect = 3.244e-37
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  683 GMGEPMLNLKSVLDXXXCLD 742
            GMGEP+LN+  V+    CL+
Sbjct:  153 GMGEPLLNIPEVVTAIHCLN 172

HSP 3 Score: 26.5646 bits (57), Expect = 3.244e-37
Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 3

Query:  744 KDVQIGQRMIYIPLWGVPNTIK-----NWALTTSVTLASAS 851
            KDV IGQR + I   G+P+ IK     N  +T +V+L +++
Sbjct:  173 KDVGIGQRCLTISTVGLPHKIKQLAEHNLQITFAVSLHASN 213

The following BLAST results are available for this feature:

BLAST of EY649732 vs. ExPASy Swiss-Prot

BLAST of EY649732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
RLMN_SYNS3	9.531e-41	48.77	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_SYNPX	3.540e-40	47.83	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_PROMT	5.977e-40	43.27	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_PROM1	7.771e-40	43.27	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_PROM4	2.220e-39	47.20	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_SYNS9	2.221e-39	47.53	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_SYNPW	2.221e-39	45.40	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_SYNSC	3.977e-38	49.38	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_PROMA	8.736e-38	46.25	Ribosomal RNA large subunit methyltransferase N OS...	[more]
RLMN_MICAN	3.244e-37	49.38	Ribosomal RNA large subunit methyltransferase N OS...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-002-H06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649732 ID=EY649732; Name=EY649732; organism=Citrus sinensis; type=EST; length=854bp
TAGACGTCGAAGCAGGGGTTTTAGTGAAAACAGAGAGAGGAGAAGGAAAG
GATAATTGCCGTTTCAATGACTCTGCTTCGGCAAGTGATCTCTGCTCCCG
TAGCACATGCGGTGGTGCTTTCTCGCTCCTGCCTTGCAGTTTCTGTGACC
CCGCGGCGCAAGTTATCTGTTTCTTCTTCTTCACGTGCCCCTCGCGTGGA
CGCCAACGTGCTCCTTGGCATGTCCGAGCAGGAGCTTCAAAAACTCGCCG
TCGACCTCGGCCAGCAAAGTTACAGAGGGAAGCAGCTTCATCATCTAATT
TACAAAAGAAAGGTCAAAGAAATTGAAAATTTTATTCAACTGCCTCAGTC
CTTCAGAAATGATCTCCAAGAAGCTGGATGGACGGTTGGTCGCTTGCCGA
TTTTTCGCACGGTCACTGCAGCTGATGGAACTGTTAAATTGCTAATAAAG
CTGGAAGACAACAGATTGATTGAAACTGTTGGCATACCAGTTGAAGACGA
GAAAGGTCCCATGCGTCTTACCGCTTGTGTGTCATCGCAGGTAGGTTGCC
CATTGCGTTGTTCGTTTTGTGCCACTGGAAAGGGAGGATTTTCAAGAAAT
CTTTCAAGCCATGAAATTGTTGGGCAGGTGTTAGCAATTGAAGAGATCTT
CAAGCATANGGGTGACAACGTAGTGTTCATGGGGAATGGGCGAGCCAATG
TTGAACCTAAAGTCTGTGCTTGACCNATTNNGATGTTTGGATTAAGGATG
TGCAAATTGGACAAAGGATGATTTACATTCCACTGTGGGGGGTTCCGAAC
ACAATTAAAAATTGGGCTCTTACAACTTCAGTAACATTGGCTTCAGCTTC
ATGC