EY649730

Overview
NameEY649730
Unique NameEY649730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649730 vs. ExPASy Swiss-Prot
Match: ABA2_PRUAR (Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.736e-64
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 1
Query:   40 MVSSMFYNSVNLSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGT-SGQSKNPTQMKAAVA---ESPTNNSDSENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSW 537
            M S++FYNS+NLS AVFSRTHFP+P+ K   +EFS   H  +Y  R+ T SGQ K  T+++A VA   E P+  + ++ KK                   K+KGF+V+VFEKD+SA+RGEGQYRGPIQIQSNALAALEAID+DVAEEVMR GCVTGDRINGLVDG+SG+W
Sbjct:    1 MASTLFYNSMNLSAAVFSRTHFPIPINKDFPLEFSPCIHT-DYHLRSRTRSGQKKCLTEVRATVASPTEVPSAPASTQPKKLRILVAGGGIGGLVFALAAKKKGFDVVVFEKDLSAVRGEGQYRGPIQIQSNALAALEAIDMDVAEEVMRVGCVTGDRINGLVDGVSGTW 169          

HSP 2 Score: 80.8777 bits (198), Expect = 4.736e-64
Identity = 37/52 (71.15%), Postives = 47/52 (90.38%), Query Frame = 3
Query:  540 IKFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNEKYVIDFKDHGD 695
            +KFDTFTPA E+GLPVTRVISR+ LQQILA+AVG+EII+N+  V++F+D GD
Sbjct:  171 VKFDTFTPAVERGLPVTRVISRIALQQILARAVGEEIIINDSNVVNFEDLGD 222          
BLAST of EY649730 vs. ExPASy Swiss-Prot
Match: ABA2_SOLLC (Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.161e-53
Identity = 86/177 (48.59%), Postives = 109/177 (61.58%), Query Frame = 1
Query:   40 MVSSMFYNSVNLSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQMKAAVAESP---TNNSDS--------ENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSW 537
            M S++FY SV+ ST+V SR   P+ + K    E      C + +   G   + K   ++KA +AE+P   T  +DS          KK                   K++GF+VLVFE+D+SAIRGEGQYRGPIQIQSNALAALEAIDLDVAE++M AGC+TG RINGLVDGISG+W
Sbjct:    1 MYSTVFYTSVHPSTSVLSRKQLPLLISKDFSAELYHSLPCRSLE--NGHINKVKG-VKVKATIAEAPVTPTEKTDSGANGDLKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEDIMNAGCITGQRINGLVDGISGNW 174          

HSP 2 Score: 85.5001 bits (210), Expect = 4.161e-53
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 3
Query:  543 KFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNEKYVIDFKDHGD 695
            KFDTFTPA E+GLPVTRVISRMTLQQILA+AVG+EII+NE  V+DF+D G+
Sbjct:  177 KFDTFTPAVERGLPVTRVISRMTLQQILARAVGEEIIMNESNVVDFEDDGE 227          
BLAST of EY649730 vs. ExPASy Swiss-Prot
Match: ABA2_NICPL (Zeaxanthin epoxidase, chloroplastic OS=Nicotiana plumbaginifolia GN=ABA2 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.219e-51
Identity = 84/172 (48.84%), Postives = 107/172 (62.21%), Query Frame = 1
Query:   40 MVSSMFYNSVNLSTAVFSRTHFPVPVYKHSCIEFSRYDHCINYKFRTGTSGQSKNPTQM-KAAVAESP-----TNNSDSENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSW 537
            M S++FY SV+ ST+ FSR   P+ + K    E      C     R+  +GQ K    + KA +AE+P     T+      KK                   K++GF+VLVFE+D+SAIRGEGQYRGPIQIQSNALAALEAID+DVAE++M AGC+TG RINGLVDG+SG+W
Sbjct:    1 MYSTVFYTSVHPSTSAFSRKQLPLLISKDFPTELYHSLPCS----RSLENGQIKKVKGVVKATIAEAPATIPPTDLKKVPQKKLKVLVAGGGIGGLVFALAAKKRGFDVLVFERDLSAIRGEGQYRGPIQIQSNALAALEAIDMDVAEDIMNAGCITGQRINGLVDGVSGNW 168          

HSP 2 Score: 79.7221 bits (195), Expect = 2.219e-51
Identity = 37/51 (72.55%), Postives = 46/51 (90.20%), Query Frame = 3
Query:  543 KFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNEKYVIDFKDHGD 695
            KFDTFTPA E+GLPVTRVISRMTLQQ LA+AVG++II+NE  V++F+D G+
Sbjct:  171 KFDTFTPAVERGLPVTRVISRMTLQQNLARAVGEDIIMNESNVVNFEDDGE 221          
BLAST of EY649730 vs. ExPASy Swiss-Prot
Match: ABA2_CAPAN (Zeaxanthin epoxidase, chloroplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.825e-48
Identity = 70/122 (57.38%), Postives = 85/122 (69.67%), Query Frame = 1
Query:  187 SGQSKNPTQMKAAVAESPT-----NNSDSENKKXXXXXXXXXXXXXXXXXXXKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSW 537
            +G  K    +KA +AE+P      +NS+   KK                   K++GF+VLVFE+D+SAIRGEGQYRGPIQIQSNALAALEAID+DVAEE+M AGC+TG RINGLVDGISG+W
Sbjct:   45 NGHIKKVKGVKATLAEAPATPTEKSNSEVPQKKLKVLVAGGGIGGLVFALAGKKRGFDVLVFERDISAIRGEGQYRGPIQIQSNALAALEAIDMDVAEEIMNAGCITGQRINGLVDGISGNW 166          

HSP 2 Score: 78.5666 bits (192), Expect = 4.825e-48
Identity = 35/51 (68.63%), Postives = 45/51 (88.24%), Query Frame = 3
Query:  543 KFDTFTPAAEKGLPVTRVISRMTLQQILAKAVGDEIILNEKYVIDFKDHGD 695
            KFDTFTPA E+GLPVTRVISRMTLQQILA+  G+++I+NE +V++F D G+
Sbjct:  169 KFDTFTPAVERGLPVTRVISRMTLQQILARLQGEDVIMNESHVVNFADDGE 219          
The following BLAST results are available for this feature:
BLAST of EY649730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ABA2_PRUAR4.736e-6458.82Zeaxanthin epoxidase, chloroplastic OS=Prunus arme... [more]
ABA2_SOLLC4.161e-5348.59Zeaxanthin epoxidase, chloroplastic OS=Solanum lyc... [more]
ABA2_NICPL2.219e-5148.84Zeaxanthin epoxidase, chloroplastic OS=Nicotiana p... [more]
ABA2_CAPAN4.825e-4857.38Zeaxanthin epoxidase, chloroplastic OS=Capsicum an... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-H04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649730 ID=EY649730; Name=EY649730; organism=Citrus sinensis; type=EST; length=916bp
GGNGAGAACACTGCAGAAAGAAGCCGTTGGAGAAACAAGATGGTTTCATC
TATGTTCTACAATTCAGTCAATCTTTCAACAGCTGTTTTCTCAAGAACCC
ACTTCCCAGTTCCTGTATACAAACATTCTTGCATTGAATTTTCACGTTAT
GATCACTGTATTAACTACAAATTCAGGACCGGAACAAGTGGGCAAAGCAA
GAACCCGACACAAATGAAAGCTGCAGTGGCAGAGTCCCCTACTAATAACA
GTGACAGTGAAAACAAGAAATTGAGGATTTTGGTGGCTGGTGGTGGGATT
GGAGGACTTGTATTTGCTTTGGCTGCTAAAAGGAAAGGATTTGAAGTGCT
GGTGTTTGAGAAAGATATGAGTGCTATAAGAGGTGAGGGACAATACAGAG
GTCCAATTCAGATACAAAGCAATGCATTGGCTGCTTTGGAAGCTATTGAT
TTGGATGTTGCTGAGGAAGTTATGAGAGCTGGATGTGTTACCGGTGATAG
AATTAATGGTTTGGTTGATGGGATTTCTGGTTCTTGGACATCAAGTTTGA
TACTTTCACTCCTGCAGCAGAAAAGGGACTGCCAGTCACAAGAGTAATTA
GCCGAATGACTTTGCAACAAATACTAGCTAAAGCGGTTGGGGATGAAATC
ATTTTGAATGAAAAGTATGTTATTGATTTTAAAGATCATGGAGATANGGG
TATTGAGCTGCTGATTGGGTGAAGATCATCTGCCTNNACAGATTCTTTGC
TGGTTAAAATTTGCCATTTATGGGTTTGNATTTATGTATTTATGAANTCA
GTCTCCGTANTGCTTGAAATGGACAGTGTAATGCTGGTGATCTTCTCATT
GGAGCTGATGAATTATGGCCAAGGATCACTCTATGAATTTCCATGGGGGG
ACTGGAAGATATTGGA
back to top