EY649727

Overview
NameEY649727
Unique NameEY649727
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: AGD7_ARATH (ADP-ribosylation factor GTPase-activating protein AGD7 OS=Arabidopsis thaliana GN=AGD7 PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.766e-75
Identity = 150/277 (54.15%), Postives = 182/277 (65.70%), Query Frame = 1
Query:   67 MAATRRLRDLQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNERLNTFLSQYGIPKETDIVTKYNTNAASIYRDRIQAIAEGRPWRDPPVVKETLNAGKSSSRPPLAQSASVXXXXXXXXXXXXXWWDSWDNDDFRSSNDMRMNQSVSDFICGSGCIGMHARXQIKID*RYLHTXXXXXXXXXXXXFXSRKLLKMMARPEGSRLPRGNMXVLV-----PTPATQRITIAGRCLSAVS-GVGR 879
            MAA RRLR LQSQP NK+CVDC+QKNPQWAS+SYG+FMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKM+AGGNERLN FL+QYGI KETDI++KYN+NAAS+YRDRIQA+AEGR WRDPP+VKE++  G  + +PPL+Q                  WD+WDNDD   S DMR NQS  DF   SG  G  A+ +   D                  F ++++ +  ++PEG    +G   V       P P + + +  G   S +S G GR
Sbjct:    1 MAAARRLRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMDAGGNERLNNFLAQYGISKETDIISKYNSNAASVYRDRIQALAEGRQWRDPPIVKESVGGGLMNKKPPLSQGGG--------RDSGNGGWDNWDNDDSFRSTDMRRNQSAGDF-RSSGGRGAPAKSKSSED--IYSRSQLEASAANKESFFAKRMAENESKPEGLPPSQGGKYVGFGSSPGPAPRSNQQSGGGDVFSVMSEGFGR 266          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: AGD6_ARATH (Probable ADP-ribosylation factor GTPase-activating protein AGD6 OS=Arabidopsis thaliana GN=AGD6 PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 7.269e-73
Identity = 145/247 (58.70%), Postives = 169/247 (68.42%), Query Frame = 1
Query:   67 MAATRRLRDLQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNERLNTFLSQYGIPKETDIVTKYNTNAASIYRDRIQAIAEGRPWRDPPVVKETLNAGKSSSRPPLAQSASVXXXXXXXXXXXXXWWDSWDNDDFRSSNDMRMNQSVSDFICGSGCIGMHARXQIKID*RYLHT-XXXXXXXXXXXXFXSRKLLKMMARPEGSRLPRGNMXV 804
            MAATR+LR LQSQP NK+CVDCAQKNPQWASVSYG+FMCLECSGKHRGLGVHISFVRSVTMDSWS IQIKKMEAGGNERLN F +QYGI KETDI++KYN+NAAS+YRDRIQA+AEGRPW DPPVVKE      ++ +PPLAQ                  WDSWDNDD   S DMR NQS +DF       G H + +   D   ++T             F +R++ +  ++PEG    +G   V
Sbjct:    1 MAATRQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSAIQIKKMEAGGNERLNKFFAQYGIAKETDIISKYNSNAASVYRDRIQALAEGRPWNDPPVVKE------ANKKPPLAQGG-----YGNNNNNNNGGWDSWDNDDSYKS-DMRRNQSANDFRASGNREGAHVKSKSSED---IYTRSQLEASAAGKESFFARRMAENESKPEGLPPSQGGKYV 232          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG1_HUMAN (ADP-ribosylation factor GTPase-activating protein 1 OS=Homo sapiens GN=ARFGAP1 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 6.225e-32
Identity = 60/115 (52.17%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   85 LRDLQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNERLNTFL-SQYGIPKETDIVTKYNTNAASIYRDRIQAIAEGRPW 426
            L++++ Q  N +C +C   NPQW SV+YG+++CLECSG+HRGLGVH+SFVRSVTMD W +I+++KM+AGGN +   FL SQ        +  KYN+ AA+++RD++ A+AEGR W
Sbjct:   10 LKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEKYNSRAAALFRDKVVALAEGREW 124          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG1_MOUSE (ADP-ribosylation factor GTPase-activating protein 1 OS=Mus musculus GN=Arfgap1 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 1.062e-31
Identity = 70/186 (37.63%), Postives = 107/186 (57.53%), Query Frame = 1
Query:   85 LRDLQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNERLNTFL-SQYGIPKETDIVTKYNTNAASIYRDRIQAIAEGRPWR---------DPPVVKETLNAGKSSSRPPLAQSASVXXXXXXXXXXXXXWWDSWDNDDFRSSNDMRMNQSV 612
            L+++++Q  N +C +C   NPQW SV+YG+++CLECSG+HRGLGVH+SFVRSVTMD W +I+++KM+AGGN +   FL +Q        +  KY++ AA+++RD++  +AEG+ W           PP  K        +S  P + +AS               ++ W NDD  S    + N+ V
Sbjct:   10 LKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLETQDDYEPSWSLQDKYSSRAAALFRDKVATLAEGKEWSLESSPAQNWTPPQPKTLQFTAHRASGQPQSAAAS-----------GDKAFEDWLNDDLGSYQGAQENRYV 184          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG1_RAT (ADP-ribosylation factor GTPase-activating protein 1 OS=Rattus norvegicus GN=Arfgap1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.270e-31
Identity = 56/115 (48.70%), Postives = 86/115 (74.78%), Query Frame = 1
Query:   85 LRDLQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSEIQIKKMEAGGNERLNTFL-SQYGIPKETDIVTKYNTNAASIYRDRIQAIAEGRPW 426
            L+++++Q  N +C +C   NPQW SV+YG+++CLECSG+HRGLGVH+SFVRSVTMD W +I+++KM+AGGN +   FL +Q        +  KY++ AA+++RD++  +AEG+ W
Sbjct:   10 LKEVRAQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLEAQDDYEPSWSLQDKYSSRAAALFRDKVATLAEGKEW 124          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG3_BOVIN (ADP-ribosylation factor GTPase-activating protein 3 OS=Bos taurus GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.197e-28
Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 1
Query:   94 LQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDS-WSEIQIKKMEAGGNERLNTFLSQYGIPKETDIVTKYNTNAASIYRDRIQAIA 411
            L+S P NK+C DC  KNP WAS++YGVF+C++CSG HR LGVH+SF+RS  +DS WS  Q++ M+ GGN   ++F  Q+G     D   KYN+ AA +YR+RI+A+A
Sbjct:   16 LRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGC-DTNDTNAKYNSRAAQLYRERIKALA 121          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG3_MOUSE (ADP-ribosylation factor GTPase-activating protein 3 OS=Mus musculus GN=Arfgap3 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 5.454e-28
Identity = 55/107 (51.40%), Postives = 77/107 (71.96%), Query Frame = 1
Query:   94 LQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDS-WSEIQIKKMEAGGNERLNTFLSQYGIPKETDIVTKYNTNAASIYRDRIQAIA 411
            L+S P NK+C DC  KNP WAS+SYGVF+C++CSG HR LGVH+SF+RS  +DS WS  Q++ M+ GGN   ++F  Q+G   + D   KYN+ AA +YR++I+ +A
Sbjct:   16 LRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNSNASSFFHQHGCATK-DTNAKYNSRAAQLYREKIKTLA 121          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG3_RAT (ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus GN=Arfgap3 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.123e-28
Identity = 55/107 (51.40%), Postives = 77/107 (71.96%), Query Frame = 1
Query:   94 LQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDS-WSEIQIKKMEAGGNERLNTFLSQYGIPKETDIVTKYNTNAASIYRDRIQAIA 411
            L+S P NK+C DC  KNP WAS+SYGVF+C++CSG HR LGVH+SF+RS  +DS WS  Q++ M+ GGN   ++F  Q+G   + D   KYN+ AA +YR++I+ +A
Sbjct:   16 LRSVPTNKVCFDCGAKNPSWASISYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGCATK-DTNAKYNSRAAQLYREKIKTLA 121          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG3_MACFA (ADP-ribosylation factor GTPase-activating protein 3 OS=Macaca fascicularis GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.303e-28
Identity = 54/107 (50.47%), Postives = 78/107 (72.90%), Query Frame = 1
Query:   94 LQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDS-WSEIQIKKMEAGGNERLNTFLSQYGIPKETDIVTKYNTNAASIYRDRIQAIA 411
            L+S P NK+C DC  KNP WAS++YGVF+C++CSG HR LGVH+SF+RS  +DS WS  Q++ M+ GGN   ++F  Q+G    +D   KYN+ AA +YR++I+++A
Sbjct:   16 LRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGC-STSDTNAKYNSRAAQLYREKIKSLA 121          
BLAST of EY649727 vs. ExPASy Swiss-Prot
Match: ARFG3_PONAB (ADP-ribosylation factor GTPase-activating protein 3 OS=Pongo abelii GN=ARFGAP3 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.215e-27
Identity = 54/107 (50.47%), Postives = 77/107 (71.96%), Query Frame = 1
Query:   94 LQSQPGNKICVDCAQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDS-WSEIQIKKMEAGGNERLNTFLSQYGIPKETDIVTKYNTNAASIYRDRIQAIA 411
            L+S P NK+C DC  KNP WAS++YGVF+C++CSG HR LGVH+SF+RS  +DS WS  Q++ M+ GGN   ++F  Q+G     D   KYN+ AA +YR++I+++A
Sbjct:   16 LRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNANASSFFHQHGC-STNDTNAKYNSRAAQLYREKIKSLA 121          
The following BLAST results are available for this feature:
BLAST of EY649727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
AGD7_ARATH7.766e-7554.15ADP-ribosylation factor GTPase-activating protein ... [more]
AGD6_ARATH7.269e-7358.70Probable ADP-ribosylation factor GTPase-activating... [more]
ARFG1_HUMAN6.225e-3252.17ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG1_MOUSE1.062e-3137.63ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG1_RAT5.270e-3148.70ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_BOVIN3.197e-2852.34ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_MOUSE5.454e-2851.40ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_RAT7.123e-2851.40ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_MACFA9.303e-2850.47ADP-ribosylation factor GTPase-activating protein ... [more]
ARFG3_PONAB1.215e-2750.47ADP-ribosylation factor GTPase-activating protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-H01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649727 ID=EY649727; Name=EY649727; organism=Citrus sinensis; type=EST; length=938bp
CCACGCGTCCGGTCGATTCGATTTTGAGTGAATCCGATACAGATCGATCG
GATCGGACCGTAAAAAATGGCGGCAACGAGGCGGCTACGAGATCTCCAAT
CACAGCCAGGTAACAAGATCTGCGTCGATTGCGCCCAAAAGAATCCTCAA
TGGGCCTCTGTTTCCTACGGCGTCTTCATGTGCTTAGAGTGCTCCGGCAA
GCACCGCGGCCTCGGTGTCCACATCTCCTTTGTCCGATCCGTTACCATGG
ACTCCTGGTCCGAGATCCAGATCAAGAAAATGGAAGCTGGCGGCAACGAA
CGCCTCAACACGTTCCTCTCCCAATACGGGATCCCTAAAGAAACGGATAT
CGTGACCAAATACAACACAAATGCCGCCAGCATTTATCGCGACAGAATCC
AAGCTATAGCCGAGGGCCGCCCCTGGCGGGACCCACCCGTGGTCAAAGAA
ACTTTGAACGCTGGGAAAAGTAGTAGTAGGCCTCCGCTGGCACAGAGTGC
TTCTGTCGGTGGCGTTGGCAGGAATGGTAATTATGGCAATCATGGATGGT
GGGATAGTTGGGACAACGACGATTTTAGATCGTCGAATGATATGAGAATG
AACCAATCGGTTTCCGATTTTATATGCGGGAGTGGGTGCATTGGGATGCA
TGCCCGCTTNCAGATCAAAATCGACTGAAGATATTTACACACGTGCGGAA
TTGGAGGCGTCTGCTGCTAATAGGAGGGTTTTTNCTCGCGAAAATTGCTG
AAAATGATGGCTCGCCCCGAGGGCTCCCGCCTCCCAAGGGGGAATATGNC
GGTGTTGGTCCCCACCCCCGCTACACAGAGGATTACAATCGCAGGGAGAT
GTCTCTCTGCTGTCTCAGGGGTTGGTAGATATCTTGGTGGCGATCTGCAC
TCATCTGCTGGACTGTGTCAGCGCCACAAGGGATTTAC
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