EY702828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV1_ARATH (Histone H2A variant 1 OS=Arabidopsis thaliana GN=H2AV PE=1 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.720e-63 Identity = 121/132 (91.67%), Postives = 128/132 (96.97%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKD 407 GGKGL+AAKT A NKDKDKDKK+PISRS+RAGIQFPVGRIHR LK+R++AHGRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTK+ Sbjct: 5 GGKGLVAAKTMAANKDKDKDKKKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 136
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV2_ARATH (Probable histone H2A variant 2 OS=Arabidopsis thaliana GN=At2g38810 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.397e-59 Identity = 117/132 (88.64%), Postives = 122/132 (92.42%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKD 407 GGKGLLAAKTTA +KD KK+ ISRSSRAGIQFPVGRIHR LK R++AHGRVGATAAVY ASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSL+NK TKD Sbjct: 5 GGKGLLAAKTTAAAANKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNKVTKD 136
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV1_ORYSJ (Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica GN=Os03g0162200 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.112e-59 Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNK-DKDKDKKR-PISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKD 407 GGKGLLAAKTTA DKDKDKK+ P+SRSSRAG+QFPVGRIHR LKSR +AHGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKT+K+ Sbjct: 5 GGKGLLAAKTTAAKSADKDKDKKKAPVSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.494e-58 Identity = 117/135 (86.67%), Postives = 125/135 (92.59%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNK--DKDKDKKR-PISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKD 407 GGKGLLAAKTTA DKDKD+K+ P+SRSSRAGIQFPVGRIHR LK R++A+GRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKT K+ Sbjct: 5 GGKGLLAAKTTAAKAAADKDKDRKKAPVSRSSRAGIQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTAKE 139
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV3_ORYSJ (Probable histone H2A variant 3 OS=Oryza sativa subsp. japonica GN=Os03g0743400 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.969e-57 Identity = 114/133 (85.71%), Postives = 122/133 (91.73%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNK-DKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKD 407 GGKGLLAAKTTA +KDK KK P+SRSSRAG+QFPVGRIHR LK R A+GRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++K+ Sbjct: 5 GGKGLLAAKTTAAKSAEKDKGKKAPVSRSSRAGLQFPVGRIHRQLKQRTQANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 137
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV3_ARATH (Probable histone H2A variant 3 OS=Arabidopsis thaliana GN=At1g52740 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.036e-54 Identity = 108/132 (81.82%), Postives = 119/132 (90.15%), Query Frame = 3 Query: 12 GGKGLLAAKTTAGNKDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKD 407 G KGL+ K + DKDKDKK+PI+RSSRAG+QFPVGR+HR LK+R AHGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK+ K+ Sbjct: 5 GAKGLIMGKPSGS--DKDKDKKKPITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSAKE 134
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_CHICK (Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 1.109e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 3 Query: 54 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKTKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AV_DROME (Histone H2A.v OS=Drosophila melanogaster GN=His2Av PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.109e-48 Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 3 Query: 54 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395 KD K K + +SRS+RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKAKAVSRSARAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_SHEEP (Histone H2A.Z OS=Ovis aries GN=H2AFZ PE=2 SV=3) HSP 1 Score: 192.971 bits (489), Expect = 1.449e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 3 Query: 54 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121
BLAST of EY702828 vs. ExPASy Swiss-Prot
Match: H2AZ_RAT (Histone H2A.Z OS=Rattus norvegicus GN=H2afz PE=1 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 1.449e-48 Identity = 97/114 (85.09%), Postives = 103/114 (90.35%), Query Frame = 3 Query: 54 KDKDKDKKRPISRSSRAGIQFPVGRIHRHLKSRIAAHGRVGATAAVYLASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 395 KD K K + +SRS RAG+QFPVGRIHRHLKSR +HGRVGATAAVY A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD+LIK TIAGGGVIPHIHKSLI K Sbjct: 8 KDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGK 121 The following BLAST results are available for this feature:
BLAST of EY702828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 243
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702828 ID=EY702828; Name=EY702828; organism=Citrus sinensis; type=EST; length=738bpback to top |