EY649716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 9.061e-39 Identity = 84/147 (57.14%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 113 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXX----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEECSGE 535 MKGGKSK++++ A KL+VN DPNKPKRP SAFFVFMEEFR+ + K+HP+NK+V+AVGKA G KWK+MS+A+KAPYVAK+EKRKVEYEK+M+ YN++QAEG VNDEDDDEE SGE Sbjct: 1 MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVNDEDDDEEGSGE 147
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.356e-33 Identity = 74/141 (52.48%), Postives = 96/141 (68.09%), Query Frame = 2 Query: 113 MKGGKSKSDTRNAKLSVNXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEECSGE 535 MKGGKSK+ + N KL+V DPNKPKRP SAFFVFME+FR+ YK+ HP NKSVA VGKAGG+KWK ++ A+KAP+++KAEKRK EYEK+++ YN++QA G VND+D+D++ SGE Sbjct: 1 MKGGKSKAKSDN-KLAVKKQAADTKKTKKAVK-DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAGA--AEEEESDKSRSEVNDDDEDQDGSGE 137
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.186e-30 Identity = 77/144 (53.47%), Postives = 92/144 (63.89%), Query Frame = 2 Query: 113 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXX-----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 MKGGKSK +++ A KL+VN DPNKPKRP SAFFVFM +FREQYKKDHP NKSVAAVGKA GE+WKS+SE +KAPYV +A K+K EYE ++ YN++ EG VNDED+DEE Sbjct: 1 MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK-LEG--KDDEEGSDKSKSEVNDEDEDEE 141
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 7.196e-28 Identity = 71/147 (48.30%), Postives = 89/147 (60.54%), Query Frame = 2 Query: 113 MKGGKSKSDTR-NAKLSVNXXXXXXXXXXXXXXX--DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTK--------PXXXXXXXXXXXXVNDEDDDE 520 MKG KSK + +AKL+V DPNKPKR SAFFVFMEEFR+++K+ +PKNKSVAAVGKA G++WKS+SE+DKAPYVAKA K K+EY K + YN+ ++ K VNDEDD+E Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVNDEDDEE 147
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.315e-26 Identity = 70/151 (46.36%), Postives = 88/151 (58.28%), Query Frame = 2 Query: 113 MKGGKSKSDTR-NAKLSVNXXXXXXXXXXXXXXX---DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQ-----------AEGTKPXXXXXXXXXXXXVNDEDDDE 520 MKG KSK + +AKL+V DPNKPKR SAFFVFM EFRE++K+ +PKNKSVAAVGKA GE+WKS+SE++KAPYVAKA K K EY K + YN+ + A+ + +ND+DDDE Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEINDDDDDE 151
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGT_ONCMY (High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.986e-15 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNY-NRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP+SAFF+F +FR Q K + P S+ V K GEKW +++ DK PY KA + K +YEKD+ Y N+ + + P +D+DDD+E Sbjct: 90 DPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVPVSMPAKAAAPAKDDDDDDDDDDDDE 193
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB3_MOUSE (High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 1.009e-13 Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNY-NRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+ +K PYV KA K K +YEKD+ +Y ++ + +G K +E+++EE Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEEEEEEEEEE 192
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB3_HUMAN (High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 1.009e-13 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++++++K PY+ KA K K +YEKD+ +Y +++G V +ED++EE Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADY---KSKGKFDGAKGPAKVARKKVEEEDEEEE 188
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB3_CHICK (High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNY-NRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP SAFF+F EFR + K +P S+ V K GE W ++S+ +K PY KA K K +YEKD+ +Y ++ + +G K V +ED++EE Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAK---GAATKAARKKVEEEDEEEE 189
BLAST of EY649716 vs. ExPASy Swiss-Prot
Match: HMGB3_BOVIN (High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.247e-13 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 212 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTKPXXXXXXXXXXXXVNDEDDDEE 523 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+++K PY+ KA K K +YEKD+ +Y +++G V +ED+++E Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADY---KSKGKFDGAKGAAKVARKKVEEEDEEDE 188 The following BLAST results are available for this feature:
BLAST of EY649716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649716 ID=EY649716; Name=EY649716; organism=Citrus sinensis; type=EST; length=945bpback to top |