EY649712

Overview
NameEY649712
Unique NameEY649712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649712_ssr796 microsatellite EY649712_ssr796:796..813. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.602e-30
Identity = 71/165 (43.03%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  210 FIRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGFEDVA-DGQMKEEVCDRVEYVKKLTSNALALVNRYA 701
            FI+TSC  T YP +C  +LS YA TIQ +P +LAS A+ V+L++ ++   ++  +++    G   R  AA+HDC     D+++ +  S  +M+ +  A  +   F F+MSNV+TW+SAALTDE TC DGF     DG++KE V  +V  V ++TSNALALVN +A
Sbjct:   28 FIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFK--GLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGN--DFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFA 188          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.614e-14
Identity = 43/168 (25.60%), Postives = 95/168 (56.55%), Query Frame = 3
Query:  192 SGTGTDFIRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLS-KAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGF-EDVADGQMKEEVCDRVEYVKKLTSNALALV 689
            S +    ++++C++TL+PE+CYS +   +   ++  +Q   + + + ++ KA R   Y      +   G   R   ALHDC     + ++E++ +++ +        ++ S +  + +++T +S+A+T++ETC DGF  D AD ++++ +    ++V+K+ SNALA++
Sbjct:   59 SSSAHAIVKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELY----PNKKSLKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.414e-14
Identity = 43/178 (24.16%), Postives = 91/178 (51.12%), Query Frame = 3
Query:  183 DTGSGTGTDFIRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGF-EDVADGQMKEEVCDRVEYVKKLTSNALALVNRYAENGM 713
            D G+      +++SC+ST YP++C+S ++      ++  +Q   + + + ++      NY             +R   ALHDC     + ++E++ +++ + +      ++ S      +++T MSAA+T++ TC DGF  D A+  +++ + D   +V+K+ SNALA++    +  M
Sbjct:   59 DNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEY----PNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM 232          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.414e-14
Identity = 43/178 (24.16%), Postives = 91/178 (51.12%), Query Frame = 3
Query:  183 DTGSGTGTDFIRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGF-EDVADGQMKEEVCDRVEYVKKLTSNALALVNRYAENGM 713
            D G+      +++SC+ST YP++C+S ++      ++  +Q   + + + ++      NY             +R   ALHDC     + ++E++ +++ + +      ++ S      +++T MSAA+T++ TC DGF  D A+  +++ + D   +V+K+ SNALA++    +  M
Sbjct:   59 DNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEY----PNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDM 232          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.695e-13
Identity = 45/174 (25.86%), Postives = 88/174 (50.57%), Query Frame = 3
Query:  186 TGSGTGTDFIRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGFE-DVADGQMKEEVCDRVEYVKKLTSNALALVNRYAE 704
            T S T    +++ C+STLYPE+C+S ++           ++   ++ +T    K     V  +  +   G   R   ALHDC     + ++E++ +++ + Q       + S R    +++T +S+A+T++ TC DGF  D AD ++++ +     +V+ + SNALA++    E
Sbjct:   53 TLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRK-GLTPREVTALHDCLETIDETLDELHVAVEDLHQY----PKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMIKNMTE 221          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.890e-13
Identity = 48/165 (29.09%), Postives = 89/165 (53.94%), Query Frame = 3
Query:  213 IRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGFEDV----ADGQMKEEVCDRVEYVKKLTSNALALVNR 695
            ++  C++T YP  C+S++S    +   DP  L  +++ V + +   ++++ S +   A+   D R   A+  C S FGDA++ +  S+  +  +     S AS    +SNV+TW+SAALTD++TC D   ++    A G + +E+   +    +  SN+LA+V +
Sbjct:   77 LKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDE---LSSFPSKLRANAE--QDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSAS----VSNVETWLSAALTDQDTCLDAVGELNSTAARGAL-QEIETAMRNSTEFASNSLAIVTK 231          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.410e-13
Identity = 42/169 (24.85%), Postives = 87/169 (51.48%), Query Frame = 3
Query:  213 IRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGFEDV-------ADGQMKEEVCDRVEYVKKLTSNALALVNRY 698
            +R  C+ T YP  C S++S+  S+   DP  L  +++ V +++   +A     ++ + D   D+R  ++L  C   F DA++ +  ++  M ++        S    +  +QTW+SAA+TD +TC D  +++       A+  +  ++   +   +K TSN+LA++ ++
Sbjct:  271 LRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLAEETD---DERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKS--STIDEIQTWLSAAVTDHDTCLDALDELSQNKTEYANSPISLKLKSAMVNSRKFTSNSLAIIAKF 434          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.434e-12
Identity = 43/163 (26.38%), Postives = 81/163 (49.69%), Query Frame = 3
Query:  204 TDFIRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGFEDV--ADGQMKEEVCDRVEYVKKLTSNALAL 686
            T  I  +C+ +LYP +C  TL  +  ++  D  +L  ++   TL K  +     S I+         R  +A   C     D+V+ +  +L  +  +    +         S+V TW+S+A+T+ +TCTDGF+++    G++K++V   V+ + ++ SN LA+
Sbjct:   72 TQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKALYTSSTITYTQ---MPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESH--------SDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI 223          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.434e-12
Identity = 41/165 (24.85%), Postives = 86/165 (52.12%), Query Frame = 3
Query:  213 IRTSCNSTLYPEICYSTLSRYASTIQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGF-EDVADGQMKEEVCDRVEYVKKLTSNALALVNRYAE 704
            +R+SC+ST YPE+C S +             +   ++ +T++  +     V  + ++   G   R   ALHDC     + ++E++ +++ +        ++ + R    +++T +S+A+T++ETC DGF  D AD Q+++ +     +V+ + SNALA++    +
Sbjct:   59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRK-GLTPREKTALHDCLETIDETLDELHETVEDLHLY----PTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMIKNMTD 218          
BLAST of EY649712 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.174e-12
Identity = 53/173 (30.64%), Postives = 79/173 (45.66%), Query Frame = 3
Query:  195 GTGTDFIRTSCNSTLYPEICYSTLSRYAST--IQQDPAQLASVAIGVTLSKAKRMANYVSNISRQADYGSDQRAAAALHDCFSNFGDAVEEIYGSLKQMRQIRSAGTSRASFRFQMSNVQTWMSAALTDEETCTDGFEDVADGQMKEEVCDRVEYVKKLTSNALALVNRYAEN 707
            G G   I+T C+STLY +IC  TL           +P      AI         +   V ++  +     D     A+  C     DA EE   SL ++       T   SF   + ++++W+SA ++ +ETC DGFE   +G +K EV   V   + LTSN+LAL+  + EN
Sbjct:  103 GQGDKIIQTLCSSTLYMQICEKTLKNRTDKGFALDNPTTFLKSAIEAVNEDLDLVLEKVLSLKTENQDDKD-----AIEQCKLLVEDAKEETVASLNKINV-----TEVNSFEKVVPDLESWLSAVMSYQETCLDGFE---EGNLKSEVKTSVNSSQVLTSNSLALIKTFTEN 262          
The following BLAST results are available for this feature:
BLAST of EY649712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
21KD_DAUCA2.602e-3043.0321 kDa protein OS=Daucus carota PE=2 SV=1[more]
PMEU1_SOLLC2.614e-1425.60Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME3_CITSI3.414e-1424.16Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI3.414e-1424.16Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME2_ARATH1.695e-1325.86Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_PHAVU2.890e-1329.09Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME26_ARATH8.410e-1324.85Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME61_ARATH1.434e-1226.38Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_ARATH1.434e-1224.85Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME13_ARATH4.174e-1230.64Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-F09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649712 ID=EY649712; Name=EY649712; organism=Citrus sinensis; type=EST; length=936bp
TACATTGGTNACGCCGCCAGTTCTTGGTCCGGNATTCCCGGGCTCGACCC
AGCGTCCGATCTCACACAAACCCAACAACCATGAAATCCCCACGTCCTCT
AATTCTTCTCTCATTCCTCTTTTCAACTTTCTTCCTCCAGCTTCATGCAA
TCCCCGCCGCAGCCCCTGCAAGCTATCCACCTGACACCGGTTCCGGCACC
GGCACGGACTTCATCCGTACAAGTTGCAACTCAACATTGTACCCCGAAAT
ATGCTACTCCACTCTATCCCGCTACGCCAGCACCATCCAGCAGGACCCCG
CTCAGCTTGCCAGCGTAGCCATCGGCGTGACGCTATCCAAAGCCAAGCGC
ATGGCTAATTACGTGTCCAACATCTCCCGCCAAGCCGACTACGGCTCCGA
CCAGCGAGCCGCAGCCGCTTTGCACGACTGTTTCTCCAACTTTGGGGACG
CAGTCGAGGAGATTTACGGCTCGCTCAAGCAGATGCGCCAGATTAGGTCG
GCTGGGACTTCCCGGGCCAGCTTTAGGTTTCAGATGAGCAATGTGCAGAC
GTGGATGAGCGCCGCGCTGACTGACGAGGAAACGTGCACGGACGGATTTG
AGGATGTGGCTGATGGGCAAATGAAGGAGGAGGTTTGTGACAGGGTTGAG
TATGTGAAGAAGTTGACGAGCAATGCACTTGCTCTTGTCAATCGTTATGC
TGAGAATGGGATGAACTGAATCGTCATGATGATGACTGGTTTTGGGCCGT
TGGATTTGGTGGCGGGTTAGATAGAACTTANTTCGTGATTNTGTGATATA
TATATATATATATTAAGAGTGAGTTAGTTTCGGGTTTATTGTATATGTTG
NTCTGGTACATTTTATTTTCATTTTAATTTTTTCTATTATAGGAACCCGA
TCTAGTACTGGGTTGGACTCTGAGTCATACAGTCTT
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