EY649698

Overview
NameEY649698
Unique NameEY649698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649698_ssr796 microsatellite EY649698_ssr796:796..807. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_NICPL (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 6.904e-100
Identity = 177/196 (90.31%), Postives = 188/196 (95.92%), Query Frame = 1
Query:   43 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            MAGNG+F +I++GDVFKYY++GEWKKS SGKSV I+NPTTR+T YKVQAC+QEEVNKVME AK AQK WAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEV+RSGDLVSY AEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ
Sbjct:    1 MAGNGVFVDIIEGDVFKYYSEGEWKKSASGKSVAIINPTTRKTQYKVQACTQEEVNKVMEVAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYTAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 196          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_PEA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Pisum sativum GN=GAPN PE=1 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 2.624e-99
Identity = 176/196 (89.80%), Postives = 187/196 (95.41%), Query Frame = 1
Query:   43 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            MA  G+ AEI+DGDV+KYYADGEWKKS SGKSV I+NPTTR+  YKVQACSQEEVNKVM++AK+AQK WAKTPLWKRAELLHKAAAILKEHKA IAECLVKEIAKPAKDAVTEV+RSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKIAPALIAGNS+VLKPPTQ
Sbjct:    1 MAATGVLAEIIDGDVYKYYADGEWKKSTSGKSVAIINPTTRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAAAILKEHKAAIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQ 196          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_APIGR (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 7.145e-97
Identity = 169/196 (86.22%), Postives = 186/196 (94.90%), Query Frame = 1
Query:   43 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            MAG+G++A+I++GDVFKYY+DGEWKKS+SGKSV I+NPTTR T +KVQAC+QEEVNK ME AK  QK WAKTPLWKRAELLHKAAAILKEHKA IA+CLVKEIAKPAKD+VTEV+RSGDLVSYCAEEGVR+LGEGKFLVSDSFPGNERTKYCLTSKIPLGV+LAIPPFNYPVNLAVSKI PALIAGN+LVLKPPTQ
Sbjct:    1 MAGSGVYADIIEGDVFKYYSDGEWKKSSSGKSVAIINPTTRMTQFKVQACTQEEVNKAMETAKKVQKQWAKTPLWKRAELLHKAAAILKEHKAAIADCLVKEIAKPAKDSVTEVVRSGDLVSYCAEEGVRLLGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIGPALIAGNALVLKPPTQ 196          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_ARATH (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Arabidopsis thaliana GN=ALDH11A3 PE=1 SV=2)

HSP 1 Score: 351.673 bits (901), Expect = 3.546e-96
Identity = 171/196 (87.24%), Postives = 187/196 (95.41%), Query Frame = 1
Query:   43 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            MAG G+FAEILDG+V+KYYADGEWK S+SGKSV I+NP TR+T YKVQAC+QEEVN VME AK+AQK WAKTPLWKRAELLHKAAAILK++KAP+AE LVKEIAKPAKD+VTEV+RSGDL+SYCAEEGVRILGEGKFL+SDSFPGN+RTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ
Sbjct:    1 MAGTGLFAEILDGEVYKYYADGEWKTSSSGKSVAIMNPATRKTQYKVQACTQEEVNAVMELAKSAQKSWAKTPLWKRAELLHKAAAILKDNKAPMAESLVKEIAKPAKDSVTEVVRSGDLISYCAEEGVRILGEGKFLLSDSFPGNDRTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 196          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 5.661e-94
Identity = 167/196 (85.20%), Postives = 183/196 (93.37%), Query Frame = 1
Query:   43 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            MAG G+FA++LDG+V+KYYADGEW+ S SGK+V IVNPTTR+T Y+VQAC+QEEVNKVM+AAK AQK WA+TPLWKRAELLHKAAAILKEHK PIAE LVKEIAKPAKDAV+EV+RSGDLVSY AEEGVRILGEGK LVSDSFPGNER KYCL+SK+PLGVVLAIPPFNYPVNLAVSKI PALIAGNSLVLKPPTQ
Sbjct:    1 MAGTGVFADVLDGEVYKYYADGEWRASASGKTVAIVNPTTRQTQYRVQACTQEEVNKVMDAAKVAQKSWARTPLWKRAELLHKAAAILKEHKTPIAESLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLLVSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPALIAGNSLVLKPPTQ 196          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_MAIZE (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 6.259e-93
Identity = 164/196 (83.67%), Postives = 182/196 (92.86%), Query Frame = 1
Query:   43 MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            +AG G+FAEILDG+V++YYADGEW+ S SGKSV IVNPTTR+T Y+VQAC+QEEVNK M+AAK AQK WA+TPLWKRA++LHKAAAILKEHKAPIAECLVKEIAKPAKDAV+EV+RSGDLVSY AEEGVRILGEGK +VSDSFPGNER KYCL+SKIPLGVVLAIPPFNYP NLA SKI PALIAGN+LVLKPPTQ
Sbjct:    3 LAGTGVFAEILDGEVYRYYADGEWRTSASGKSVAIVNPTTRKTQYRVQACTQEEVNKAMDAAKVAQKAWARTPLWKRADVLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLVVSDSFPGNERNKYCLSSKIPLGVVLAIPPFNYPANLAGSKIGPALIAGNALVLKPPTQ 198          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.978e-38
Identity = 92/181 (50.83%), Postives = 114/181 (62.98%), Query Frame = 1
Query:   88 FKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            +K Y +GEWK S   + + I  P T      V A SQEEV+ V  +AKAAQK W      +RAE LHKAA IL      I   L KEIAK  K AV EVIR+ ++++Y AEEGVR+  EG+ L   SF    + K  +  + P+G+VLAI PFNYP+NLA SKIAPALI+GN + LKPPTQ
Sbjct:    5 YKNYVNGEWKLSK--EEIKIYAPATGEELGSVPAMSQEEVDYVYASAKAAQKAWRALSYVERAEYLHKAADILMRDAEKIGAVLSKEIAKGYKSAVGEVIRTAEIINYAAEEGVRL--EGEVLEGGSFDPASKKKIAIVRREPVGLVLAISPFNYPINLAGSKIAPALISGNVVALKPPTQ 181          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: GAPN_STRMU (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus mutans GN=gapN PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.200e-35
Identity = 85/181 (46.96%), Postives = 110/181 (60.77%), Query Frame = 1
Query:   88 FKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            +K Y +GEWK S +   + I  P +      V A S EEV+ V  +AK AQ  W      +RA  LHK A IL   K  I   L KE+AK  K AV+EV+R+ ++++Y AEEG+R+  EG+ L   SF    + K  +  + P+G+VLAI PFNYPVNLA SKIAPALIAGN +  KPPTQ
Sbjct:    5 YKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRSLSYIERAAYLHKVADILMRDKEKIGAVLSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRM--EGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 181          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: ALDH_BACST (Aldehyde dehydrogenase, thermostable OS=Bacillus stearothermophilus GN=aldHT PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.772e-24
Identity = 66/179 (36.87%), Postives = 99/179 (55.31%), Query Frame = 1
Query:   97 YADGEWKKSNSGKSVPIVNPTTRRTHYK-VQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            Y +G W  S S    P +NP  R      VQ  + E+VN+ + AA  AQ  W K    +R E L+KAA IL++    IAE + +E+ K   +A  E +R   ++ Y A EG R +G       D  P ++      T+++PLGVV  I P+N+PV + + K+APAL+ GN++VLKP ++
Sbjct:   13 YINGNWVSSVSNNVEPSINPANRHDIVGYVQRSTLEDVNEAVTAANEAQTSWWKRSGVERGEYLYKAAHILEQCLQDIAETMTREMGKTLAEAKAETMRGVHILRYYAGEGARKIG-------DVIPSSDSEGLLFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVLKPASE 184          
BLAST of EY649698 vs. ExPASy Swiss-Prot
Match: ALDH1_BACSU (Probable aldehyde dehydrogenase ycbD OS=Bacillus subtilis GN=ycbD PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.797e-23
Identity = 63/188 (33.51%), Postives = 101/188 (53.72%), Query Frame = 1
Query:   70 ILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYK-VQACSQEEVNKVMEAAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQ 630
            I + + +  + +GEW KS SG  V + NP         VQ  + E+V + + AA  A+  W K    +R + L+K A I+++    IA C  +E+ K   +A  E  R   ++ Y A EG+R  G       D  P  ++     T+++PLGVV  I P+N+PV + + K+APAL+ GN++V+KP T+
Sbjct:    4 ITEQNTYLNFINGEWVKSQSGDMVKVENPADVNDIVGYVQNSTAEDVERAVTAANEAKTAWRKLTGAERGQYLYKTADIMEQRLEEIAACATREMGKTLPEAKGETARGIAILRYYAGEGMRKTG-------DVIPSTDKDALMFTTRVPLGVVGVISPWNFPVAIPIWKMAPALVYGNTVVIKPATE 184          
The following BLAST results are available for this feature:
BLAST of EY649698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
GAPN_NICPL6.904e-10090.31NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_PEA2.624e-9989.80NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_APIGR7.145e-9786.22NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_ARATH3.546e-9687.24NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_WHEAT5.661e-9485.20NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_MAIZE6.259e-9383.67NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STREI1.978e-3850.83NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STRMU1.200e-3546.96NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
ALDH_BACST2.772e-2436.87Aldehyde dehydrogenase, thermostable OS=Bacillus s... [more]
ALDH1_BACSU1.797e-2333.51Probable aldehyde dehydrogenase ycbD OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-E05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649698 ID=EY649698; Name=EY649698; organism=Citrus sinensis; type=EST; length=931bp
TTCTTCAACTAGTTTACTCTGTTGGGTGGTTCATTGTGAGAAATGGCTGG
CAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTATG
CTGATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGTC
AACCCCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAGA
GGAGGTGAACAAGGTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGGG
CAAAGACTCCGCTTTGGAAGAGAGCTGAGCTCCTGCACAAGGCTGCTGCA
ATTCTCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTTAAAGAAAT
TGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGATT
TGGTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAAG
TTTTTGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTCT
CACTTCAAAGATTCCACTTGGTGTGGTTTTGGCCATTCCACCGTTCAACT
ATCCAGTCAATCTTGCCGTTTCCAAAATTGCTCCTGCACTGATTGCTGGA
AATTCCCTTGTGCTTAAGCCTCCTACTCAGGTATTTTAAATATAAGTCAG
CTCAGTCTGTANGGTATTTTATTTTTTATTTTTTTAAAATATAATGTGTG
TGTCTGATATCTATTCATGGATTTTCACAGAAAATAATAAGGTGATGGTT
GAAAATTTCTGAAATTATGCGATCAATGTTGNGATATCTCTCAAATTTGT
TTGTTTGGGGATGTCCTGAACTGANCCGTTGGAATACAAATTTATTGGGT
TTGGATACATATAGNAAACTAGATAATTCTATATCANCCATAGCTTCTTT
AGGGGGCTGGTGCTGCCCTTCACTGGGGCAT
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