EY649696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649696 vs. ExPASy Swiss-Prot
Match: MRP_SYNY3 (Protein mrp homolog OS=Synechocystis sp. (strain PCC 6803) GN=mrp PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.292e-15 Identity = 49/144 (34.03%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 271 VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMVNDTIIIVLIKK*RVFGMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPE--GLQKISNIVAVSSCKGCVXKSTVAVNLAYTLXXMGA 696 VL L + DP+ +V ++D+ I A G VSF L LTTPACP+++ + + + V +P V KV V ++A+ + + LP+ + ++ NI+A+SS KG V KSTVAVN+A L GA Sbjct: 7 VLTVLRPVQDPELQKSLVELNMIRDVAI--AGGTVSFTLVLTTPACPLREFIVED------------------CEKAVKTLPGVEKVEVKVTAETPQQ---KSLPDRQSVGQVKNIIAISSGKGGVGKSTVAVNVAVALAQTGA 127 HSP 2 Score: 31.187 bits (69), Expect = 6.292e-15 Identity = 11/17 (64.71%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 701 VGIFDADVYGPSLPTMV 751 VG+ DAD+YGP+ PTM+ Sbjct: 129 VGLLDADIYGPNAPTML 145
BLAST of EY649696 vs. ExPASy Swiss-Prot
Match: MRP_DEIRA (Protein mrp homolog OS=Deinococcus radiodurans GN=mrp PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 9.080e-13 Identity = 47/143 (32.87%), Postives = 71/143 (49.65%), Query Frame = 1 Query: 271 VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMVNDTIIIVLIKK*RVFGMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGCVXKSTVAVNLAYTLXXMGAR 699 +L+ALS + DP+ D+VS G ++ +++ + +V ++ LTTPACP+K G E +L +P V V + A + A P L + ++V V S KG V KS+VAVNLA +L GAR Sbjct: 5 LLRALSTVNDPELHRDLVSLGMIERAELSGDVAQV--KVNLTTPACPLK------------------GQIELDVRSALLQVPGVRDVQIEFGAM----VRAATQP-ALPGVKHVVLVGSGKGGVGKSSVAVNLAASLARDGAR 122 HSP 2 Score: 29.6462 bits (65), Expect = 9.080e-13 Identity = 22/66 (33.33%), Postives = 31/66 (46.97%), Query Frame = 2 Query: 701 VGIFDADVYGPSLPTMVSPENRLLXMNPEERNXIPN*YLGVKL---------GVFWIFRGRXVHIA 871 VG+ DADVYGPS+ M+ + N E+R P GV+ G ++RG +H A Sbjct: 123 VGLLDADVYGPSVAHMLGQGQARVTAN-EDRKMRPIEAHGVRFISMANLSPAGQALVWRGPMLHSA 187
BLAST of EY649696 vs. ExPASy Swiss-Prot
Match: MRP_HELPJ (Protein mrp homolog OS=Helicobacter pylori J99 GN=mrp PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 2.703e-11 Identity = 40/147 (27.21%), Postives = 71/147 (48.30%), Query Frame = 1 Query: 262 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMVNDTIIIVLIKK*RVFGMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK-ISNIVAVSSCKGCVXKSTVAVNLAYTLXXMGAR 699 + DVL AL II P+F DIVS GFVK++ +++ ++ +E+ + + ++ + I + +K V +N+ + P +P + + L K I ++V +SS KG V KST +VNL+ L + + Sbjct: 4 QEDVLNALKTIIYPNFEKDIVSFGFVKNITLHD--NQLGLLIEIPSSSEETSAILRENISKAMQEK-------------------GVKALNLDIKT-PPKPQAPKPTTKNLAKNIKHVVMISSGKGGVGKSTTSVNLSIALANLNQK 128 HSP 2 Score: 41.2022 bits (95), Expect = 2.703e-11 Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 2 Query: 695 QGVGIFDADVYGPSLPTMVSPENRLLXMNPEERNXIPN*YLGVKL 829 Q VG+ DADVYGP++P M+ +N + M+P + IP GV + Sbjct: 127 QKVGLLDADVYGPNIPRMMGLQNADVIMDPSGKKLIPLKAFGVSV 171 The following BLAST results are available for this feature:
BLAST of EY649696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649696 ID=EY649696; Name=EY649696; organism=Citrus sinensis; type=EST; length=920bpback to top |