EY649659

Overview
NameEY649659
Unique NameEY649659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649659 vs. ExPASy Swiss-Prot
Match: DNM1B_ORYSJ (DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.082e-74
Identity = 143/321 (44.55%), Postives = 194/321 (60.44%), Query Frame = 3
Query:    3 FV*FMFEKSDSKKMVHGRHMLRGSETFLGNTADANEVFLTNDCLEIELEDVKEVVAVEILLIPWGHQHRKTNACKDKIVRERAEDRRIDQFPMEYYCKSLYWPERGAFFKLPKDTMGLGTGVCHSCKIKET---------------------------------GREKD----------------VFKLLGIEVPETSTKACPGSTKVKVRRFFRPEDISEEKAYYADIREVYYSKLVLTVPVTGVEGKCDIRKKHDLAPLDSPTIFEHIFFCEHLYDPDEGTIKQLPPHIKTSVLKERVADDTAYRKINGK--CKEEKHD 812
            FV +MF+K +  KMVHGR + +GSET LGN A+  ++FLTN+CLE ELED+KE+++V +  +PWGH++RK NA  D+I R +AEDR+    PMEY CKSLYWPE+GAFF LP D +GLG G C SC+ KE                                   +E+D                V  LL +  P  S K  P STK+ VRRF+RP+DIS  KAY +DIREVYYS+ ++ VPV  +EGKC+++KK D++  D P + EH FFCEH YDP  G +KQLPP++K   ++++     A +K  GK  C+ ++ D
Sbjct:  762 FVEYMFQKLNGAKMVHGRLLQKGSETVLGNAANERDLFLTNECLEFELEDIKELMSVNLQSLPWGHKYRKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPEKGAFFSLPHDKLGLGNGFCSSCQQKEPDCDELQILSKNSFIYRNITYNVNDYLYIRPDFFSQEEDRATFKGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISVRRFYRPDDISSAKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEHEFFCEHFYDPATGALKQLPPNVKLMSVQQKATG--ALKKNKGKQICESDQVD 1080          

HSP 2 Score: 27.335 bits (59), Expect = 1.082e-74
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  853 LXHLRYFAGCGGLSDGL 903
            L  L  FAGCGGLS+GL
Sbjct: 1093 LATLDIFAGCGGLSEGL 1109          
BLAST of EY649659 vs. ExPASy Swiss-Prot
Match: DNM1A_ORYSJ (DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica GN=MET1A PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 6.344e-72
Identity = 139/311 (44.69%), Postives = 183/311 (58.84%), Query Frame = 3
Query:    3 FV*FMFEKSDSKKMVHGRHMLRGSETFLGNTADANEVFLTNDCLEIELEDVKEVVAVEILLIPWGHQHRKTNACKDKIVRERAEDRRIDQFPMEYYCKSLYWPERGAFFKLPKDTMGLGTGVCHSCKIKETGRE----------------------------------KDVFK--------------LLGIEVPETSTKACPGSTKVKVRRFFRPEDISEEKAYYADIREVYYSKLVLTVPVTGVEGKCDIRKKHDLAPLDSPTIFEHIFFCEHLYDPDEGTIKQLPPHIKTSVLKERVADDTAYRKINGK 791
            FV +M+EK D K M+HG  +  GS+T LGN A+  EVFLTNDCLE E  D+KE+V V I  +PWGH++RK N+   +I + +AE+R+    P+EY CKSLYWPE+G FF LP D +G GTG+C SC+ K  G E                                   + +K              LL +  P  S KA P STKVKVRRF+RP+DIS  KAY +DIREVYYS+ +++VPV  +EGKC++R K DL   D P + EH+F CE+LYDP  G +KQLPP+++   L  +V    A +K  GK
Sbjct:  763 FVEYMYEKLDGKNMIHGIILQEGSQTVLGNAANDREVFLTNDCLEFEASDIKELVTVNIQSLPWGHKYRKENSEAKRIEKAKAEERKRKGLPVEYICKSLYWPEKGGFFSLPYDKIGNGTGICSSCERKPVGNEFKLLSESSFVFENITYNIHDFLYIRPEFFSQGEGHETYKAGRNVGLKPYAVCHLLSVHGPAGSRKANPESTKVKVRRFYRPDDISSTKAYSSDIREVYYSEDIISVPVVMIEGKCEVRLKDDLPNSDLPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKV---PASKKNKGK 1070          

HSP 2 Score: 27.335 bits (59), Expect = 6.344e-72
Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  853 LXHLRYFAGCGGLSDGL 903
            L  L  FAGCGGLS+GL
Sbjct: 1092 LATLDIFAGCGGLSEGL 1108          
BLAST of EY649659 vs. ExPASy Swiss-Prot
Match: DNMT1_ARATH (DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.801e-62
Identity = 131/326 (40.18%), Postives = 179/326 (54.91%), Query Frame = 3
Query:    3 FV*FMFEKSDSKKMVHGRHMLRGSETFLGNTADANEVFLTNDCLEIELEDVKEVVAVEILLIPWGHQHRKTNACKDKIVRERAEDRRIDQFPMEYYCKSLYWPERGAFFKLPKDTMGLGTGVCHSCKIKETGREKDVFKL---------LGIE--------------------------------------------VPETSTKACPGSTKVKVRRFFRPEDISEEKAYYADIREVYYSKLVLTVPVTGVEGKCDIRKKHDLAPLDSPTIFEHIFFCEHLYDPDEGTIKQLPPHIKTSVLKERVADDTAYRKINGKCKEEKHDGAV 821
            FV +MFE +D  KM+HGR + RGS T LGN A+  E+FLTN+C+  +L+D+K V + EI   PWGHQ+RK N   DK+   RA +R++   P EYYCKSLY PERG FF LP   +G  +G C SCKI+E   ++   KL          GIE                                            VP+ S KA  GS  VKVRRF+RPED+S EKAY +DI+E+Y+S+  + +P   +EGKC++RKK D+       I +HIFFC+  +D  +G++KQLP ++K       + DDT  RK  GK  E + +  +
Sbjct:  758 FVEYMFESTDHCKMLHGRFLQRGSMTVLGNAANERELFLTNECMTTQLKDIKGVASFEIRSRPWGHQYRKKNITADKLDWARALERKVKDLPTEYYCKSLYSPERGGFFSLPLSDIGRSSGFCTSCKIREDEEKRSTIKLNVSKTGFFINGIEYSVEDFVYVNPDSIGGLKEGSKTSFKSGRNIGLRAYVVCQLLEIVPKESRKADLGSFDVKVRRFYRPEDVSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPISDHIFFCDLFFDTSKGSLKQLPANMKPKF--STIKDDTLLRKKKGKGVESEIESEI 1081          

HSP 2 Score: 26.1794 bits (56), Expect = 1.801e-62
Identity = 12/17 (70.59%), Postives = 12/17 (70.59%), Query Frame = 1
Query:  853 LXHLRYFAGCGGLSDGL 903
            L  L  FAGCGGLS GL
Sbjct: 1093 LATLDIFAGCGGLSHGL 1109          
The following BLAST results are available for this feature:
BLAST of EY649659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
DNM1B_ORYSJ1.082e-7444.55DNA (cytosine-5)-methyltransferase 1B OS=Oryza sat... [more]
DNM1A_ORYSJ6.344e-7244.69DNA (cytosine-5)-methyltransferase 1A OS=Oryza sat... [more]
DNMT1_ARATH1.801e-6240.18DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-A10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649659 ID=EY649659; Name=EY649659; organism=Citrus sinensis; type=EST; length=906bp
ATTTTGTTTAGTTTATGTTTGAAAAGTCAGATTCAAAAAAGATGGTTCAT
GGCAGACACATGCTAAGAGGCTCTGAAACGTTTCTTGGTAATACTGCAGA
TGCCAATGAGGTTTTTTTGACAAACGATTGCCTGGAAATTGAACTGGAAG
ATGTTAAAGAAGTTGTGGCAGTTGAAATCTTATTGATTCCTTGGGGGCAT
CAACATCGGAAGACTAATGCTTGCAAGGACAAGATTGTTCGTGAAAGAGC
AGAGGATCGAAGAATTGATCAATTCCCCATGGAATATTATTGCAAAAGCT
TGTACTGGCCTGAGAGAGGTGCTTTCTTTAAGCTTCCAAAAGATACCATG
GGACTTGGAACAGGAGTTTGCCATTCTTGTAAAATAAAGGAAACCGGGAG
GGAGAAGGACGTTTTCAAGTTGCTAGGTATTGAAGTACCAGAGACTTCCA
CAAAAGCTTGCCCTGGATCCACTAAGGTTAAAGTTCGGAGATTTTTCAGA
CCCGAGGACATATCAGAGGAGAAAGCATACTACGCTGACATTAGAGAAGT
TTATTACAGTAAACTAGTATTGACAGTTCCTGTTACTGGAGTAGAAGGCA
AATGTGACATTAGAAAGAAGCATGATCTTGCCCCTTTGGATAGCCCCACA
ATCTTTGAGCATATTTTCTTCTGCGAGCATTTATACGATCCTGATGAAGG
AACCATCAAGCAGTTGCCGCCTCACATCAAGACTAGTGTGCTAAAAGAGA
GGGTGGCTGATGATACTGCTTATAGAAAGATAAATGGGAAATGTAAAGAG
GAAAAGCATGATGGTGCTGTTGACAACAGACGGATGCTGTCCATAAGAAT
CGCTTANCCACCTTAGATATTTCGCAGGTTGTGGTGGCTTATCTGATGGC
CTACAC
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