EY649656

Overview
NameEY649656
Unique NameEY649656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1686 contig Csv1_Contig1686:460..1292. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649656 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.959e-71
Identity = 136/276 (49.28%), Postives = 182/276 (65.94%), Query Frame = 3
Query:    9 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVSQHLANLTTPATPFFFNTLYDPFREGADFVRGYPFSLRSGVDCALSCGLWLNLADYDAPTQALKPEHRNSHYVDAVMTVPAGTLMPISGINIAFNR-AVGGASFVPRSEVNWGGKAEVGKH*RIWCGMCVRVYAITWILG*NRATLCV-*ERQGNSIENLKKNGKGV 827
            E+DIVI  +++    FL  WR  F  +HLIIVQD D    +K+P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  G   NA+ QH+ NL +P+TPFFFNTLYDP+REGADFVRGYPFSLR G   A+S GLWLN+ DYDAPTQ +KP+ RN  YVDAVMT+P GTL P+ G+N+AF+R  +G A +        G    +G++  +W G CV+V      LG       +   +  N   NLKK  KG+
Sbjct:   21 ELDIVIPTIRN--LDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKERNERYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGL----MGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGI 290          
BLAST of EY649656 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.342e-71
Identity = 133/276 (48.19%), Postives = 184/276 (66.67%), Query Frame = 3
Query:    9 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVSQHLANLTTPATPFFFNTLYDPFREGADFVRGYPFSLRSGVDCALSCGLWLNLADYDAPTQALKPEHRNSHYVDAVMTVPAGTLMPISGINIAFNR-AVGGASFVPRSEVNWGGKAEVGKH*RIWCGMCVRVYAITWILG*NRATLCV-*ERQGNSIENLKKNGKGV 827
            E+DIVI  +++    FL  WRP F ++HLIIVQD D    +K+P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  G+  NA+ QH+ NL +P+TPFFFNTLYDP+REG DFVRGYPFSLR GV  A+S GLWLN+ DYDAPTQ +KP  RN+ +VDAV+T+P G+L P+ G+N+AFNR  +G A +        G    +G++  +W G C++V       G       +   +  N   NLKK  KG+
Sbjct:   14 ELDIVIPTIRN--LDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHERNTRFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGL----MGDGQPIGRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGI 283          
BLAST of EY649656 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 6.303e-70
Identity = 133/276 (48.19%), Postives = 180/276 (65.22%), Query Frame = 3
Query:    9 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVSQHLANLTTPATPFFFNTLYDPFREGADFVRGYPFSLRSGVDCALSCGLWLNLADYDAPTQALKPEHRNSHYVDAVMTVPAGTLMPISGINIAFNR-AVGGASFVPRSEVNWGGKAEVGKH*RIWCGMCVRVYAITWILG*NRATLCV-*ERQGNSIENLKKNGKGV 827
            E+DIVI  +++    FL  WRP F  +HLIIVQD D    + +P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  G   NA+ QH+ NL  P+TP FFNTLYDP+REGADFVRGYPFS+R G   A+S GLWLN+ DYDAPTQ +KP  RN+ YVDAVMT+P GTL P+ G+N+AF+R  +G A +        G    +G++  +W G C++V      LG       +   +  N   NLKK  KG+
Sbjct:   15 ELDIVIPTIRN--LDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGL----MGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGI 284          
BLAST of EY649656 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 2.395e-69
Identity = 132/276 (47.83%), Postives = 179/276 (64.86%), Query Frame = 3
Query:    9 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVSQHLANLTTPATPFFFNTLYDPFREGADFVRGYPFSLRSGVDCALSCGLWLNLADYDAPTQALKPEHRNSHYVDAVMTVPAGTLMPISGINIAFNR-AVGGASFVPRSEVNWGGKAEVGKH*RIWCGMCVRVYAITWILG*NRATLCV-*ERQGNSIENLKKNGKGV 827
            E+DIVI  +++    FL  WRP F  +HLIIVQD D    +K+P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  G   NA+ QH+ NL  P+TP FFNTLYDP+R+GADFVRGYPFS+R G   A+S GLWLN+ DYDAPTQ +KP  RN+ YVDAVMT+P GTL P+ G+N+AF+R  +G A +        G    +G++  +W G C +V      LG       +   +  N   NLKK   G+
Sbjct:   11 ELDIVIPTIRN--LDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVKPHERNTRYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGL----MGDGQPIGRYDDMWAGWCTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGI 280          
The following BLAST results are available for this feature:
BLAST of EY649656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
UPTG_MAIZE1.959e-7149.28Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG_PEA3.342e-7148.19Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG2_SOLTU6.303e-7048.19Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
UPTG1_SOLTU2.395e-6947.83Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-A07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649656 ID=EY649656; Name=EY649656; organism=Citrus sinensis; type=EST; length=833bp
ACGACAGTGAGGTTGACATCGTTATAGCAGCTCTGCAATCTGACCTGACA
TCATTCCTAAATGCATGGAGACCGCTATTCTCCCGCTTCCACCTTATAAT
TGTCCAAGACCCTGATCTCAAAGGGGAACTCAAAATACCACAAGGTTTTG
ACCATCGTGTCTATACTAAGTCTGACATTGACCAAGTTATCGGTCCTACC
ACATCCATTGTCTTCTCTGGTTATTCATGCAGGTACTTTGGCTATCTGGT
ATCTAGAAAGAAATATATTATCTCTGTTGATGATGATTGCCTTCCAGCAA
AGGACAATGATGGCAATTTAACCAATGCCGTGAGCCAGCATCTTGCCAAT
CTTACAACACCAGCTACTCCTTTCTTCTTTAATACACTCTATGACCCTTT
TCGGGAGGGAGCAGATTTTGTTCGTGGATATCCATTTAGCCTGCGAAGTG
GAGTTGACTGTGCTTTGTCCTGTGGCCTCTGGCTCAACTTGGCAGATTAT
GATGCACCTACGCAAGCTCTCAAGCCGGAACACAGAAATTCGCATTATGT
TGATGCTGTTATGACTGTTCCAGCTGGGACTTTGATGCCCATCAGCGGAA
TTAACATTGCTTTTAATCGTGCCGTTGGTGGGGCCAGCTTTGTTCCCAGG
TCTGAAGTTAACTGGGGAGGGAAAGCTGAGGTGGGAAAACATTGAAGAAT
CTGGTGTGGGATGTGTGTCAGGGTTTATGCGATCACTTGGATATTGGGGT
GAAACCGGGCTACTTTATGTGTTTAGGAGCGACAGGGTAATTCGATAGAA
AACTTGAAAAAGAATGGGAAGGGGGTGAAAAAG
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