EY649653

Overview
NameEY649653
Unique NameEY649653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6929 contig Csv1_Contig6929:1..936. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649653 vs. ExPASy Swiss-Prot
Match: Y1669_ARATH (Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana GN=At1g06690 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.375e-35
Identity = 79/213 (37.09%), Postives = 115/213 (53.99%), Query Frame = 3
Query:  108 KVKMG--PLSASPMGFGTWAWGNQFLWGYQESMDSQLQQT---FNLAVENGINLFDTADSYGTGRLNG--KSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALW------NGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSLLSMGDNQLEIK 707
            KVK+G   L  + +G G W+WG+   W   +  D +L+     F+ +++NGI+ FDTA+ YG+    G   SE LLG+FI E   ++     + +ATKFAA PWR      V A + SL+RL++  + + QLHW            LW      +GL    E+GLV+AVGVSNY   +L   ++ L  RG+PL S QV +SL+     Q  +K
Sbjct:   48 KVKLGGSDLKVTKLGIGVWSWGDNSYWNDFQWDDRKLKAAKGAFDTSLDNGIDFFDTAEVYGSKFSLGAISSETLLGRFIRERK-ERYPGAEVSVATKFAALPWRFGRESVVTALKDSLSRLELSSVDLYQLHWP----------GLWGNEGYLDGLGDAVEQGLVKAVGVSNYSEKRLRDAYERLKKRGIPLASNQVNYSLIYRAPEQTGVK 249          

HSP 2 Score: 44.2838 bits (103), Expect = 4.375e-35
Identity = 20/38 (52.63%), Postives = 23/38 (60.53%), Query Frame = 2
Query:  698 GDQDICDSLGIRXISYSPPRLGNATGKYTPSKLPRGPR 811
            G +  CD LG+  I+YSP   G  TGKYTP   P GPR
Sbjct:  247 GVKAACDELGVTLIAYSPIAQGALTGKYTPENPPSGPR 284          
BLAST of EY649653 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.875e-13
Identity = 57/167 (34.13%), Postives = 85/167 (50.90%), Query Frame = 3
Query:  126 LSASPMGFGTWAWGNQFLWGYQESMDSQLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWR-------LTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQL 605
            + AS +G GTWA G   +WG  +   S   +T   A++ GI L DTA +YG     G+SE+++GK I E   + QV    ++ATK  A  W+           + V     SL RLQ + I + Q+HW      P +E A    +  +Y+ G +RA+GVSN+   Q+
Sbjct:   11 IEASRIGLGTWAIGGT-MWGGTDEKTSI--ETIRAALDQGITLIDTAPAYGF----GQSEEIVGKAIKEYGKRDQV----ILATK-TALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDP-LVPIEETA--EVMKELYDAGKIRAIGVSNFSIEQM 162          
BLAST of EY649653 vs. ExPASy Swiss-Prot
Match: Y2320_MYCBO (Uncharacterized oxidoreductase Mb2320 OS=Mycobacterium bovis GN=Mb2320 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.446e-12
Identity = 59/181 (32.60%), Postives = 90/181 (49.72%), Query Frame = 3
Query:  135 SPMGFGTWAWGNQFLWGYQESMDS-QLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSL 674
            S +G GTW +G++  WGY +   +   +     A   G+ LFDTA+ YG     GKSE++LG+ + +       +  +V+A+K   +P    P    N  RAS  RLQ+ +I + Q+H    N   P  + +  G+  + + G + A GVSNY    L +      A G P+ S QV FSL
Sbjct:   13 SRIGLGTWQFGSRE-WGYGDRYATGAARDIVKRARALGVTLFDTAEIYGL----GKSERILGEALGD------DRTEVVVASK--VFPVAPFPAVIKNRERASARRLQLNRIPLYQIH--QPNPVVPDSV-IMPGMRDLLDSGDIGAAGVSNY---SLARWRKADAALGRPVVSNQVHFSL 174          

HSP 2 Score: 23.8682 bits (50), Expect = 1.446e-12
Identity = 13/27 (48.15%), Postives = 14/27 (51.85%), Query Frame = 2
Query:  737 ISYSPPRLGNATGKYTPSKLPRGPRAL 817
            I+YSP   G   GKY     P G RAL
Sbjct:  195 IAYSPLAQGLLGGKYGLENRPGGVRAL 221          
BLAST of EY649653 vs. ExPASy Swiss-Prot
Match: Y2298_MYCTU (Uncharacterized oxidoreductase Rv2298/MT2355 OS=Mycobacterium tuberculosis GN=Rv2298 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.446e-12
Identity = 59/181 (32.60%), Postives = 90/181 (49.72%), Query Frame = 3
Query:  135 SPMGFGTWAWGNQFLWGYQESMDS-QLQQTFNLAVENGINLFDTADSYGTGRLNGKSEKLLGKFISEIPGQKQVQNNIVIATKFAAYPWRLTPGQFVNACRASLARLQIEQIGIGQLHWSTANYAPPQELALWNGLVAMYEKGLVRAVGVSNYGPNQLVKIHDYLTARGVPLCSAQVQFSL 674
            S +G GTW +G++  WGY +   +   +     A   G+ LFDTA+ YG     GKSE++LG+ + +       +  +V+A+K   +P    P    N  RAS  RLQ+ +I + Q+H    N   P  + +  G+  + + G + A GVSNY    L +      A G P+ S QV FSL
Sbjct:   13 SRIGLGTWQFGSRE-WGYGDRYATGAARDIVKRARALGVTLFDTAEIYGL----GKSERILGEALGD------DRTEVVVASK--VFPVAPFPAVIKNRERASARRLQLNRIPLYQIH--QPNPVVPDSV-IMPGMRDLLDSGDIGAAGVSNY---SLARWRKADAALGRPVVSNQVHFSL 174          

HSP 2 Score: 23.8682 bits (50), Expect = 1.446e-12
Identity = 13/27 (48.15%), Postives = 14/27 (51.85%), Query Frame = 2
Query:  737 ISYSPPRLGNATGKYTPSKLPRGPRAL 817
            I+YSP   G   GKY     P G RAL
Sbjct:  195 IAYSPLAQGLLGGKYGLENRPGGVRAL 221          
The following BLAST results are available for this feature:
BLAST of EY649653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
Y1669_ARATH4.375e-3537.09Uncharacterized oxidoreductase At1g06690, chloropl... [more]
GS69_BACSU2.875e-1334.13General stress protein 69 OS=Bacillus subtilis GN=... [more]
Y2320_MYCBO1.446e-1232.60Uncharacterized oxidoreductase Mb2320 OS=Mycobacte... [more]
Y2298_MYCTU1.446e-1232.60Uncharacterized oxidoreductase Rv2298/MT2355 OS=My... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-002-A04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649653 ID=EY649653; Name=EY649653; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCCCACGGTATCCTATTTTAGCTGCTTCAACACTTTTAAT
GAAATCTCCTCTCCACTCTTCAAGCCTCCTAAACTCCCTCTCTTTTGGCC
ATGGGAAAAGGTAAAGATGGGACCATTGAGTGCTTCCCCAATGGGTTTTG
GCACCTGGGCATGGGGCAACCAGTTTCTTTGGGGATATCAAGAATCAATG
GACTCTCAGCTTCAACAAACCTTTAACTTGGCCGTGGAGAATGGTATTAA
CCTCTTTGATACTGCTGATTCTTATGGGACTGGCAGGTTAAATGGAAAGA
GTGAAAAGCTTCTTGGAAAATTTATCAGTGAAATTCCAGGGCAAAAGCAG
GTACAAAATAATATTGTGATTGCTACAAAGTTTGCAGCATACCCTTGGCG
TCTGACACCGGGGCAGTTTGTAAATGCATGCAGGGCCTCTCTTGCCCGTC
TGCAGATTGAGCAAATTGGAATTGGGCAATTACATTGGTCTACTGCAAAT
TACGCTCCTCCACAAGAATTAGCTCTTTGGAATGGTTTAGTGGCAATGTA
CGAGAAGGGTTTAGTCCGCGCAGTTGGGGTGAGCAACTATGGACCAAACC
AGCTTGTGAAGATTCATGATTACCTCACAGCTAGAGGAGTCCCTCTGTGC
TCGGCACAGGTGCAGTTTTCTTTGCTGAGTATGGGAGATAATCAGCTGGA
GATCAAGATATATGTGATTCTCTGGGTATCCGCTNGATATCTTATAGCCC
TCCTAGACTCGGAAATGCTACTGGGAAATATACACCTTCTAAACTTCCCC
GTGGACCTCGGGCATTGNTATTCANGCAAATTCTTCCNGGATTGAGCCTT
TATTGCGCTCTCTAAAGAAATTGCGGAGGACGAGGGCAACCCTCCCCAGN
CAGTTGCGATAACTGGGGCTCTGCAAAGTACCAT
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