EY649648

Overview
NameEY649648
Unique NameEY649648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: YDL6_SCHPO (Putative cation exchanger C3A12.06c OS=Schizosaccharomyces pombe GN=SPAC3A12.06c PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.032e-24
Identity = 57/154 (37.01%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   99 VVIIAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLII 560
            V  I F++ + WIST+A E++  L A+G I  L  +ILGLTV A GNS+ DL+AD+ +A++G P MAM G F GP  N+L+G+G +    + +++     +     +     FLL  L+  L+ +  +RFRV R  G  L  LY V  + ++++
Sbjct:  584 VSFIGFVLGIIWISTIANEVVGILRALGVIFNLNESILGLTVFAAGNSLSDLIADIMIARSGFPEMAMGGVFGGPTLNILIGIGISSFYSSISNHGNDSVIEIPHSLSITAYFLLACLLLLLIYVPLNRFRVNRVLGLLLFILYIVGTSTNIVV 737          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: CCX4_ARATH (Cation/calcium exchanger 4 OS=Arabidopsis thaliana GN=CCX4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.032e-24
Identity = 59/161 (36.65%), Postives = 95/161 (59.01%), Query Frame = 3
Query:   78 PKTEQMPVVIIAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPA--MAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSL 554
            P+   +P V+  F+MS+ W   +A EL+  L   G I  +  +ILGLTVLAWGNS+GDLV+++A++  G     +A++GC+AGPMFN LVGLG ++ +   +  P+ Y +     +     FL+  L+ SL+++  +  R  +  G  L+ LY +F+   L
Sbjct:  473 PQIYLIPWVLGGFIMSIVWFYMIANELVALLVTFGGIYGINPSILGLTVLAWGNSMGDLVSNIALSMNGGDGVQIALSGCYAGPMFNTLVGLGMSMFLGAWSKSPETYMIPEDNSLFYTLGFLIFGLIWSLVMLPRNEMRPNKVMGIGLITLYLIFVTFRL 633          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: NCKX6_HUMAN (Sodium/potassium/calcium exchanger 6 OS=Homo sapiens GN=SLC24A6 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.527e-24
Identity = 59/185 (31.89%), Postives = 100/185 (54.05%), Query Frame = 3
Query:    6 PLWFIVXXXXXXXXXXXXIVETEA-PKTEQMPVVIIAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLI 557
            P+W +V               +++ P         + FL S  WI+  A E++N L ++G +  L + +LGLT+LAWGNS+GD  +D  +A+ G+P MA + CF G +FN+LVG+G   ++Q + S+ +         +      L +SL+ SL+ +    F++ R +GFCL+  Y  F+ V+L+
Sbjct:  389 PVWVVVVIAGTALASVTFFATSDSQPPRLHWLFAFLGFLTSALWINAAATEVVNILRSLGVVFRLSNTVLGLTLLAWGNSIGDAFSDFTLARQGYPRMAFSACFGGIIFNILVGVGLGCLLQISRSHTEVKLEPDGLLVWVLAGALGLSLVFSLVSVPLQCFQLSRVYGFCLLLFYLNFLVVALL 573          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: NCKX6_RAT (Sodium/potassium/calcium exchanger 6 OS=Rattus norvegicus GN=Slc24a6 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.723e-24
Identity = 55/151 (36.42%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  108 IAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLL-MSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLI 557
            + FL S  WI+  A E++N L ++G +  L + +LGLT+LAWGNS+GD  +D  +A+ G+P MA + CF G +FN+LVG+G   ++Q   S+    +L     ++      L +SL+ SL+ +    F++ + +G CL+  Y  FI V L+
Sbjct:  424 LGFLTSALWINAAATEVVNILRSLGVVFRLSNTVLGLTLLAWGNSIGDAFSDFTLARQGYPRMAFSACFGGIIFNILVGVGLGCLLQIVRSHASEVKLEPDGLLVWVLASALGLSLVFSLVSVPLQCFQLSKAYGLCLLLFYICFIVVVLL 574          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: CCX3_ARATH (Cation/calcium exchanger 3 OS=Arabidopsis thaliana GN=CCX3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.935e-23
Identity = 58/164 (35.37%), Postives = 95/164 (57.93%), Query Frame = 3
Query:   78 PKTEQMPVVIIAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPA--MAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLIIA 563
            P+   +P V+  F+MS+ W   +A EL+  L   G I  +  +IL LTVLAWGNS+GDLV+++A+   G     +A++GC+AGPMFN LVGLG +++    +  P  Y L     +     FL++ L+ +++++  +  +  R  G  L+A+Y +F+   L  A
Sbjct:  472 PRRFLIPWVLGGFIMSIVWFYMIANELVALLVTFGEIYGINPSILALTVLAWGNSMGDLVSNIALTMNGGDGVQIALSGCYAGPMFNTLVGLGMSMLFGAWSKSPDTYMLPEDKSLFYTLGFLVLGLVWAMVILPRNDMQPSRTLGVGLIAIYLIFVTFRLSCA 635          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: NCKX6_MOUSE (Sodium/potassium/calcium exchanger 6 OS=Mus musculus GN=Slc24a6 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.538e-23
Identity = 54/151 (35.76%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  108 IAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLL-MSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLI 557
            + FL S  WI+  A E++N L ++G I  L + +LGLT+LAWGNS+GD  +D  +A+ G+P MA + CF G +FN+LVG+G   ++Q   ++    +L     ++      L +SL+ SL+ +    F++ + +G CL+  Y  F+ V L+
Sbjct:  424 LGFLTSALWINAAATEVVNILRSLGVIFRLSNTVLGLTLLAWGNSIGDAFSDFTLARQGYPRMAFSACFGGIIFNILVGVGLGCLLQIIRNHVVEVKLEPDGLLVWVLASALGLSLIFSLVSVPLQCFQLSKAYGLCLLLFYICFLVVVLL 574          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: NCX7_CAEEL (Putative sodium/calcium exchanger 7 OS=Caenorhabditis elegans GN=ncx-7 PE=2 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 2.484e-22
Identity = 51/148 (34.46%), Postives = 89/148 (60.14%), Query Frame = 3
Query:  114 FLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLI 557
            F+MS+ WI  ++ E++N +  +G +  +   +LGLT+LAW NS+GDL+ADV+V K G+P MAMA    GP+FN+L+G G    +        +  ++  + ++   +FL +SL+ +L+ I   +FR+ R     L+++Y  FI   ++
Sbjct:  518 FIMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVVKQGYPRMAMAAAIGGPLFNLLMGFGLPFTIAKLQGKYISMTINPTYRLL--ILFLAISLLATLIGIPVQKFRLQRPHAAVLISIYIAFIVFVIL 663          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: NCX6_CAEEL (Putative sodium/calcium exchanger 6 OS=Caenorhabditis elegans GN=ncx-6 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.103e-21
Identity = 55/150 (36.67%), Postives = 88/150 (58.67%), Query Frame = 3
Query:  114 FLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQTTNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYA---VFIAVSL 554
            FLMS+ WI  ++ E++N +  +G +  +   +LGLT+LAW NS+GDL+ADV+VAK G+P MAMA    G +FN+L+G G  L         K+  +  +       +FL +SL+ +L+ +   ++ + R   + LV +Y    VFI +SL
Sbjct:  436 FLMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSIGDLIADVSVAKQGYPRMAMAAAIGGQLFNLLIGFG--LPFTIAKIQGKSISMIINPTYRLLMLFLAISLIFTLIAMFAQKYFLRRIHSYSLVFIYISFFVFIGLSL 583          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: NCKX4_MOUSE (Sodium/potassium/calcium exchanger 4 OS=Mus musculus GN=Slc24a4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.614e-13
Identity = 48/153 (31.37%), Postives = 88/153 (57.52%), Query Frame = 3
Query:  105 IIAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQT-TNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLII 560
            ++ F+ +  WI+  +  ++  +  IG  L +P  I+G+T LA G SV D +A + VA+ G   MA++      +F++LVGLG    +QT   +Y    +++   G++ + V LL S+  ++L I  +++R+ R  G  ++ LYAVF+  S++I
Sbjct:  437 MVTFITATLWIAVFSYLMVWLVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGIPWGLQTMVINYGSTVKINSR-GLVYSVVLLLGSVALTVLGIHLNKWRLDRKLGIYVLVLYAVFLCFSIMI 588          
BLAST of EY649648 vs. ExPASy Swiss-Prot
Match: NCKX4_HUMAN (Sodium/potassium/calcium exchanger 4 OS=Homo sapiens GN=SLC24A4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 47/153 (30.72%), Postives = 88/153 (57.52%), Query Frame = 3
Query:  105 IIAFLMSVFWISTVAGELLNCLAAIGTILELPSAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVMQT-TNSYPKAYELHFHFGIITAFVFLLMSLMGSLLVIIWSRFRVPRFWGFCLVALYAVFIAVSLII 560
            ++ F+ +  WI+  +  ++  +  IG  L +P  I+G+T LA G SV D +A + VA+ G   MA++      +F++LVGLG    +QT   +Y    +++   G++ + V LL S+  ++L I  +++R+ R  G  ++ LYA+F+  S++I
Sbjct:  437 MVTFITATLWIAVFSYIMVWLVTIIGYTLGIPDVIMGITFLAAGTSVPDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWGLQTMVVNYGSTVKINSR-GLVYSVVLLLGSVALTVLGIHLNKWRLDRKLGVYVLVLYAIFLCFSIMI 588          
The following BLAST results are available for this feature:
BLAST of EY649648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
YDL6_SCHPO2.032e-2437.01Putative cation exchanger C3A12.06c OS=Schizosacch... [more]
CCX4_ARATH2.032e-2436.65Cation/calcium exchanger 4 OS=Arabidopsis thaliana... [more]
NCKX6_HUMAN4.527e-2431.89Sodium/potassium/calcium exchanger 6 OS=Homo sapie... [more]
NCKX6_RAT7.723e-2436.42Sodium/potassium/calcium exchanger 6 OS=Rattus nor... [more]
CCX3_ARATH2.935e-2335.37Cation/calcium exchanger 3 OS=Arabidopsis thaliana... [more]
NCKX6_MOUSE6.538e-2335.76Sodium/potassium/calcium exchanger 6 OS=Mus muscul... [more]
NCX7_CAEEL2.484e-2234.46Putative sodium/calcium exchanger 7 OS=Caenorhabdi... [more]
NCX6_CAEEL2.103e-2136.67Putative sodium/calcium exchanger 6 OS=Caenorhabdi... [more]
NCKX4_MOUSE1.614e-1331.37Sodium/potassium/calcium exchanger 4 OS=Mus muscul... [more]
NCKX4_HUMAN2.753e-1330.72Sodium/potassium/calcium exchanger 4 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-H11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649648 ID=EY649648; Name=EY649648; organism=Citrus sinensis; type=EST; length=903bp
ATTTTCCTCTGTGGTTCATAGTACTCTTGGCTAGCTTTTCTCTTGCACTT
CTTCACTTCATAGTGGAAACAGAAGCCCCAAAGACTGAGCAAATGCCCGT
GGTGATCATTGCATTTTTGATGAGTGTATTTTGGATATCAACTGTTGCTG
GGGAGCTGCTGAATTGTTTAGCTGCAATTGGAACAATTCTTGAATTGCCT
TCTGCTATACTGGGGCTCACGGTACTTGCATGGGGCAACTCTGTGGGAGA
TCTTGTTGCTGATGTCGCAGTGGCCAAAGCAGGTCATCCAGCAATGGCAA
TGGCTGGGTGCTTTGCTGGGCCAATGTTTAACATGCTTGTTGGGCTCGGA
TCAGCTTTGGTGATGCAAACAACCAATTCTTATCCAAAAGCTTATGAGCT
GCATTTCCACTTTGGTATTATCACTGCCTTTGTGTTCTTGCTCATGAGCT
TGATGGGTTCTCTCTTAGTCATAATTTGGTCTAGATTCCGAGTACCAAGG
TTCTGGGGATTTTGCCTTGTCGCCCTCTATGCTGTTTTCATAGCAGTCAG
CTTAATTATTGCCAAGTTTTCGGGGTGATTGGTGACATGCACAGAAAAAC
AGAATACATTTAAGACGTGCAGCTATTGCTAAATTTTGTTATGCCCACCA
ACAGCAGAACTTTGTAGTTACAGCATATTGGCTGTCGGAGCAGTACAAGA
TGGAGAAAGACTGANAAAGACTGATGTTAAGCTGCGTCAGCAATAAGCTG
TGTCGGCAGAGGTTGAANGGAGCATGACATATTGCAGGGTTCTTAATCTG
TATTTTGCCTCAATTTTCATTTGCTGCAGCTAATGANAAATCTCATATCC
TTCATGTGTTGGNCGGCTGCATGGCCATGAATTTACTCTTGTATTCAATT
GAA
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