EY649643

Overview
NameEY649643
Unique NameEY649643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1944 contig Csv1_Contig1944:60..950. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.888e-67
Identity = 139/225 (61.78%), Postives = 165/225 (73.33%), Query Frame = 3
Query:   69 GLRGSSHSQAVLEGSFQLSGPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPL-KERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            GLRG+S  QAVLEGS Q+SG NRL+ P+ SRVAV + G  +RAQQ S E ETSRRAMLG VAAG+ASGSFV+AVLA+A PI V            T NSD+ RD  LP  K+RF++QPL P            +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPKDEK+SL+ LT KLF    +LDHAAKIKS  EAEKYY +TVS +N+VL+K+G
Sbjct:   10 GLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232          
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 3.221e-67
Identity = 139/226 (61.50%), Postives = 170/226 (75.22%), Query Frame = 3
Query:   69 GLRGSSHSQAVLEGSFQLSGPNRLNAPSNSRVAVA--RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            GLRG+S  QAVLEGS Q++G NRLN    SRV+V   R G  +RAQQ  + PE+SRR+++GLVAAG+A GSFV+AV A+A PIKV            T NSD+ RD  L LK+RF+IQPLSP           K+I+NVK  IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK+EKQSLK+LT KLF    +LD+AA+ KS+P+AEKYY+ETVS+LN+VL+K+G
Sbjct:   10 GLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230          
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 231.491 bits (589), Expect = 4.981e-60
Identity = 136/226 (60.18%), Postives = 163/226 (72.12%), Query Frame = 3
Query:   69 GLRGSSHSQAVLEGSFQLSGPNRLNAPSNSRVAVA-RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXX-TLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            GL G+S   AVLEGS +++G +RLN   + RVAVA R    VRAQQ+    ETSRR+++GLVAAG+A GSFVQAVLADA  IKV             T NSD+ RD  L LK+RF++QPL P           KDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPKDEK+SLK+LT KLF    +LD+AAK KS  +AEKYYAETVS LN+VL+K+G
Sbjct:    6 GLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224          
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.732e-57
Identity = 130/228 (57.02%), Postives = 158/228 (69.30%), Query Frame = 3
Query:   90 SQAVLEGSFQL-SGPNRLNAPSNSRVAVARPGFTVRAQQ---------ASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLK-NLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            +  +LEGS QL SG NR  + S+SR       F VRAQQ         ++ +P+++RRAMLGLVA G+AS SFVQAVLA+A PIKV            TLNSDE RDL LPLKERF+IQPLSP           K+I+ VK+ ID+K      NDLRLRASYLRYDLNT+IS+KPK++KQSLK +  GKLF D  +LD+AAK+KS P+AEKYYA+ VSTLNDVLSK+G
Sbjct:    6 ASGLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLSKIG 231          
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.521e-52
Identity = 113/207 (54.59%), Postives = 141/207 (68.12%), Query Frame = 3
Query:  123 SGPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            +GP R  A   SR+AV      VRA  A+ + +T RRA+LGLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF     LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:   19 AGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 6.521e-52
Identity = 113/207 (54.59%), Postives = 141/207 (68.12%), Query Frame = 3
Query:  123 SGPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            +GP R  A   SR+AV      VRA  A+ + +T RRA+LGLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF     LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:   19 AGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.210e-51
Identity = 115/221 (52.04%), Postives = 142/221 (64.25%), Query Frame = 3
Query:   84 SHSQAVLEGSFQLSGPNRLNAPSNSRVAVARPGFTVRAQQASNE-PETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            + + A + G  Q   P+R  A S +R AV      VRA    +   +  RRA++GLVA G+  G+  QA  A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF     LDHAAKIKSTPEAEKY+A T   L DVL+K+G
Sbjct:    2 AQAMASMTGLSQGVLPSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLG 217          
BLAST of EY649643 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.032e-45
Identity = 102/200 (51.00%), Postives = 125/200 (62.50%), Query Frame = 3
Query:  144 APSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFPDHRHLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 740
            A S +R AV     +    + +  P   R      + A  +S    QAV A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF     LDHAAK+KSTPEAEKY+A T   L DVL+K+G
Sbjct:   20 ADSRTRTAVVVVRASAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKLG 213          
The following BLAST results are available for this feature:
BLAST of EY649643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSBQ_SPIOL1.888e-6761.78Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ2_ARATH3.221e-6761.50Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ1_ARATH4.981e-6060.18Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ONOVI6.732e-5757.02Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSJ6.521e-5254.59Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSI6.521e-5254.59Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_MAIZE7.210e-5152.04Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ2_MAIZE2.032e-4551.00Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-H06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649643 ID=EY649643; Name=EY649643; organism=Citrus sinensis; type=EST; length=889bp
AATTGAAAGAACAAAGTTTCTGAAACCCGATTTAGTGAAAAATGGCACAA
GCTATGGCGTCAATGGCTGGCTTACGTGGATCCTCCCACTCGCAGGCTGT
TCTTGAAGGTAGCTTCCAGCTCAGTGGCCCAAACCGCTTGAACGCCCCTA
GCAACAGCAGAGTTGCTGTGGCTCGCCCTGGTTTCACTGTTAGAGCCCAG
CAGGCATCAAACGAGCCTGAAACTAGCCGCCGTGCTATGCTTGGTCTTGT
TGCTGCAGGTGTGGCCTCAGGTTCCTTTGTTCAAGCTGTACTTGCTGATG
CCACTCCCATCAAAGTTGGTCCTCCTCCCCCACCCTCTGGCGGATTGCCT
GGAACGTTGAACTCTGATGAGCCAAGAGACCTGGATCTGCCACTGAAGGA
GAGGTTCTTCATCCAACCACTTAGTCCAGCCCAGGCAGCAGAGAGAGCAA
AGGCGTCAGCAAAGGATATTCTTAATGTCAAGGAATTAATAGACAAGAAG
GCCTGGCCCTATGTTCAGAATGATCTCCGTCTCAGGGCCTCATACCTTCG
CTATGACCTCAACACTATCATTTCTGCTAAGCCCAAAGATGAGAAACAAT
CCCTCAAGAACCTCACTGGAAAGCTCTTTCCAGACCATCGGCATCTTGAC
CATGCGGCAAAGATTAAGAGCACTCCTGAAGCAGAGAAATACTATGCGGA
GACTGTATCTACCCTGAACGATGTTCTCTCCAAGGTTGGCTAAGCAGAAT
AATATAATCTGATGTAACTATATTTTTCATTTTGTGAGGCNAACACTTCT
GTGAATTTTATTGCAAGCTGGGCGTCCGCTCAAGTATCGAGAATAATTGT
CCAGGGTGAAATGGCTATATTTAACTGCTAAAAACTGCC
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