EY649640

Overview
NameEY649640
Unique NameEY649640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649640 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.914e-47
Identity = 125/248 (50.40%), Postives = 144/248 (58.06%), Query Frame = 3
Query:  150 AANGNGEFSFGKGTARKGLAKIQTAASQKKQSAICHDDSTPPVKAQTIDELHSLQKKRSAPTTPI-KGTPGSFSPVSEEARXXXXXXXXXXXXXXXTRETGPKVVRGDPARK----AETPKFAADPSDHFSFTP-TISVSDSSLKFTHVLYNLSPAELYEQAIKYEQGSFIXXXXXXXXXXXXKTGRSPR-IXVWSKMRP*A*LWWGKGPPTWN-GRAPFFVNRKRL--WIPEFLTKFW**SILDWDP 863
            A NG+G FSF KG     + KI T A+ K+ S +CHDDS P V A TIDELHSLQKKRSAPTTPI +    +F+ VSEE R               TRE+GPKVVRGDPA K    + TP +A     H  F+P T +VSDSSLKFTHVLYNLSPAELYEQAIKYE+GSFI            KTGR+PR   V         LWWGKG P        F VNR+R   ++      F     L+WDP
Sbjct:    8 ATNGDGGFSFPKGPV---MPKITTGAA-KRGSGVCHDDSGPTVNATTIDELHSLQKKRSAPTTPINQNAAAAFAAVSEEERQKIQLQSISASLASLTRESGPKVVRGDPAEKKTDGSTTPAYAHG-QHHSIFSPATGAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSNGALATLSGAKTGRAPRDKRVVRDATTEDELWWGKGSPNIEMDEHTFMVNRERAVDYLNSLEKVFVNDQYLNWDP 250          
BLAST of EY649640 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.147e-45
Identity = 115/250 (46.00%), Postives = 139/250 (55.60%), Query Frame = 3
Query:  144 EMAANGNGEFSF----GKGTARKGLAKIQTAASQKK-QSAICHDDSTPPVKAQTIDELHSLQKKRSAPTTPIKGTPGSFSPVSEEARXXXXXXXXXXXXXXXTRETGPKVVRGDPARKAETPKFAADPSDHFSF-TPTISVSDSSLKFTHVLYNLSPAELYEQAIKYEQGSFIXXXXXXXXXXXXKTGRSP-RIXVWSKMRP*A*LWWGKGPPTWN-GRAPFFVNRKRL--WIPEFLTKFW**SILDWDP 863
            E     NGEFSF    G  T R+GL KI T  +    +  ICHDDST P++A+T++ LHSLQKKRS PTTP+  + G FSPVSE  R               TRETGPK+V+GDP +K E  K  A   DH  F  P +++SDS+LK TH+LYN SPAELYEQAIKYE+GSFI            KTGRSP    V         LWWGKG P        F +NR+R   ++      F     L+WDP
Sbjct:    2 ENEGKDNGEFSFVSDGGAETGRRGLPKIHTEKNAPTTERDICHDDSTTPMRARTLEHLHSLQKKRSTPTTPLTDSQGVFSPVSEAERQKQQLISISASLASLTRETGPKLVKGDPEKKKEAHK--ASVLDHLHFGEPILNLSDSALKSTHILYNPSPAELYEQAIKYEKGSFITSTGALATLSGAKTGRSPIDKRVVKDDTTEKELWWGKGSPNIEMDEHTFLINRERAVDYLNSLDKVFVNDQFLNWDP 249          
BLAST of EY649640 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.975e-43
Identity = 109/221 (49.32%), Postives = 128/221 (57.92%), Query Frame = 3
Query:  201 GLAKIQTAASQKKQSAICHDDSTPPVKAQTIDELHSLQKKRSAPTTPIKGTP------GSFSP----VSEEARXXXXXXXXXXXXXXXTRETGPKVVRGDPARKAE--------TPKFAADPSDHFSFTPTISVSDSSLKFTHVLYNLSPAELYEQAIKYEQGSFIXXXXXXXXXXXXKTGRSPRIXVWSKMRP*A-*LWWGKGPPTWN-GRAPFFVNRKR 803
            GLA+I+T   +K+ + + +DDS+ PV+AQTIDELHSLQ+KRSAPTTP +  P      G+ SP    +SEE R               TRETGPKVV+GDPA K E        TP+  A         P I+VSDSSLKFTHVL NLSPAELYEQAIKYE+GSFI            KTGRSPR     K    A  LWWGKG P        F +NR+R
Sbjct:    6 GLARIETTGKKKQDNGVWYDDSSAPVRAQTIDELHSLQRKRSAPTTPNRSAPTTPIKGGAHSPFAVAISEEERHTQQMQSISASLASLTRETGPKVVKGDPAAKGEAAAQGAPSTPR--AHQQHRHPAAPAIAVSDSSLKFTHVLNNLSPAELYEQAIKYEKGSFITSTGALATLSGAKTGRSPRDKRVVKDEVTAQDLWWGKGSPNIEMDEKTFLINRER 224          
BLAST of EY649640 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.080e-24
Identity = 76/190 (40.00%), Postives = 93/190 (48.95%), Query Frame = 3
Query:  255 HD-DSTPPVKAQTIDELHSLQKKRSAPT----TPIKGTPGSFSPVSEEARXXXXXXXXXXXXXXXTRETGPKVVRGDPARKAETPKFAADPSDHFSFTPTISVSDSSLKFTHVLYNLSPAELYEQAIKYEQGSFIXXXXXXXXXXXXKTGRSPR-IXVWSKMRP*A*LWWGKGPPTWN-GRAPFFVNRKR 803
            HD DS  PV AQTI+ELHSLQ+K +  T    +P++    S + ++                    RE GP +V+GDP      P          +   TI+ SDSSLKFTHVLYNLSPAELYEQA   ++ SFI            KTGRSPR   V         LWWGKG P        F +NR+R
Sbjct:   14 HDSDSAAPVNAQTIEELHSLQRKAATTTKDGASPLQSISASLASLA--------------------REYGPNLVKGDPEATKGAPPVPIKHQQPSAAAATIAASDSSLKFTHVLYNLSPAELYEQAFGQKKSSFITSTGALATLSGAKTGRSPRDKRVVKDETTSQELWWGKGSPNIEMDERQFVINRER 183          
BLAST of EY649640 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.769e-23
Identity = 82/211 (38.86%), Postives = 102/211 (48.34%), Query Frame = 3
Query:  261 DSTPPVKAQTIDELHSLQKKRSAPT----TPIKGTPGSFSPVSEEARXXXXXXXXXXXXXXXTRETGPKVVRGDPARKAETPKFAADPSDHFSFTPTISVSDSSLKFTHVLYNLSPAELYEQAIKYEQGSFIXXXXXXXXXXXXKTGRSPRIXVWSKMRP*A-*LWWGKGPPTWN-GRAPFFVNRKRLWIPEFLTK----FW**SILDWDP 863
            DS  PV+AQTI+ELHSLQ+K +A      +P++    S +  +                    RE GP +V+GDP  K   P  A       +    I+ SDSSLKFTHVLYNLSPAELYEQA   ++ SFI            KTGRSPR     K    A  LWWGKG P        F +NR+R    +FL      +     L+WDP
Sbjct:   17 DSAAPVRAQTIEELHSLQRKAAATAKDSASPLQSISASLASTA--------------------REYGPNLVKGDPEAKGAPP--APVKHQQAAAAAAIAASDSSLKFTHVLYNLSPAELYEQAFGQKKSSFITSTGALATLSGAKTGRSPRDKRVVKDDTTAQELWWGKGSPNIEMDERQFVINRERAL--DFLNSLDKVYVNDQFLNWDP 203          
The following BLAST results are available for this feature:
BLAST of EY649640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PCKA_ARATH3.914e-4750.40Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_CUCSA2.147e-4546.00Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_MAIZE9.975e-4349.32Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA2_UROPA6.080e-2440.00Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA1_UROPA1.769e-2338.86Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-H03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649640 ID=EY649640; Name=EY649640; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGCCCACGCGTCCGACAAACTGCACTTTGAATGATCGGGCT
ACCTCAGCTTTTATATTTCATCTCCCATTAGTCTTCATTTTTCTTTTTGT
TCACTTTCGTTTCAAGCTCGTAATCTCGGGGGAAGAGTCGTGAGAAATGG
CAGCGAACGGTAACGGAGAATTCAGCTTCGGAAAAGGAACGGCGAGGAAG
GGGCTAGCGAAGATTCAAACGGCGGCTTCGCAGAAGAAGCAGAGCGCGAT
ATGCCACGACGACAGCACGCCGCCTGTTAAGGCTCAGACGATTGACGAGC
TTCACTCGCTCCAAAAGAAAAGATCTGCACCAACTACCCCTATTAAAGGG
ACGCCGGGCTCTTTTTCGCCTGTTTCTGAAGAAGCACGACAGAAACAGCA
GCTCCAGTCCATCAGTGCATCGTTGGCGTCACTGACACGAGAAACAGGGC
CAAAGGTGGTGAGAGGAGATCCGGCGAGAAAGGCAGAGACACCAAAGTTT
GCGGCAGATCCCAGTGACCATTTCTCTTTCACGCCAACAATCAGCGTCAG
TGACAGTTCCTTGAAGTTCACCCACGTTCTCTACAATCTCTCTCCTGCTG
AATTGTACGAGCAGGCCATCAAGTATGAGCAAGGGTCGTTTATCGCGTCA
AGTGGTGCATTGGCAACTCTGTCTGGCGCCAAGACTGGCCGCTCTCCCAG
AATAANCGTGTGGTCAAAGATGAGACCCTGAGCATGACTTTGGTGGGGAA
AGGGTCCACCTACATGGAATGGACGAGCACCATTTTTTGTGAACAGAAAA
AGGCTGTGGATACCTGAATTCTTGACAAAGTTTTGGTGATGATCAATTCT
TGACTGGGATCCCAGNACCGGTCAAGTCAAATGGTTCTGCAGGGCTACAT
TCTTGTTCTGCCCACTGGGATTCA
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