EY649639

Overview
NameEY649639
Unique NameEY649639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649639_ssr38 microsatellite EY649639_ssr38:38..49. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.760e-80
Identity = 124/177 (70.06%), Postives = 143/177 (80.79%), Query Frame = 3
Query:   57 HSSDYAPYPKIDPNDVAPPPQNWSNVSTATGPAPI-NESAATTMPAESNPYVSPSPIEPSSSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYK 584
            HSSDYAPYPK+DP DV PPP           P PI   +AATTMPAESNPYVSPSP    + +N ++SVK  L  WGK AA+ATK+AEDLAGN WQHLKTGPS+ADAAV RIAQ TK+LAEGGYEK+F+Q+FD +P+E+LLKTYACYLSTSAGPV+GV+YLST KLAF SD+PLSYK
Sbjct:   28 HSSDYAPYPKLDPTDVTPPP-----------PQPIPTGAAATTMPAESNPYVSPSP----APRNTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYK 189          

HSP 2 Score: 68.1662 bits (165), Expect = 2.760e-80
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 2
Query:  569 PSVLQVGDETQWSYYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            P   + G++T WSYYKVV+P +QLKAVNPST +   ++KYIQVIS+DN  F   G
Sbjct:  185 PLSYKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMG 239          

HSP 3 Score: 25.7942 bits (55), Expect = 2.760e-80
Identity = 11/18 (61.11%), Postives = 11/18 (61.11%), Query Frame = 1
Query:  712 HEFWFMGLVHMIGREKSL 765
            HEFWFMG V      KSL
Sbjct:  233 HEFWFMGFVTYESAVKSL 250          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.157e-53
Identity = 90/154 (58.44%), Postives = 112/154 (72.73%), Query Frame = 3
Query:  120 NWSNVSTATGPAPINESAATTMPAESNPYVSPSPIEPS--SSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPL 575
            +W+    +  PAP  ++ +++  A SNPYV+ +P E S  S K  +ESVKGVL  WG++  EA  +AE LAGN WQH         AA+GRIAQ TKVLAEGGYEKIFRQ+F+TVPEEQL  ++ACYLSTSAGPV+GVLY+STAKLA+CSD  L
Sbjct:   29 HWNPELVSESPAPDEKALSSSSAARSNPYVARAPTETSDASLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR------AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL 176          

HSP 2 Score: 50.8322 bits (120), Expect = 3.157e-53
Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 2
Query:  617 VVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            VVIPL QLK+VNPS     PAEKYIQVISVD+  F   G
Sbjct:  177 VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMG 215          

HSP 3 Score: 25.7942 bits (55), Expect = 3.157e-53
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  712 HEFWFMGLVHMIGREKSL 765
            HEFWFMG ++  G   SL
Sbjct:  209 HEFWFMGFLNYEGAVTSL 226          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 8.558e-53
Identity = 109/196 (55.61%), Postives = 140/196 (71.43%), Query Frame = 3
Query:  120 NWSNVSTATGPAPINESAATTMPAESNPYVSPSPIEPS--SSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSYK*VMRRNGAIIRWLFH*VS*RQSIPQHAKPSQLRNISRSS 701
            +WS    +    P ++ AA++  A SNPY++ SP E S  S K+ +E+VKGVL  WGK+ AEA K+ E LAGN WQHL+T PS ADAA+GRIAQ TKV AEGGYEKIFRQ+F+T PEEQLL ++ACYLSTSAGPV+GVLY+S+AKLA+CSD+PLSYK     NG    W ++    +  IP H    QL+ ++ S+
Sbjct:   71 HWSPELVSGSQEP-DQKAASSSSAGSNPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYK-----NGDQTEWSYY----KVVIPLH----QLKAVNPSA 252          

HSP 2 Score: 25.7942 bits (55), Expect = 8.558e-53
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  712 HEFWFMGLVHMIGREKSL 765
            HEFWFMG ++  G   SL
Sbjct:  270 HEFWFMGFLNYDGAVTSL 287          

HSP 3 Score: 74.7146 bits (182), Expect = 7.967e-13
Identity = 36/49 (73.47%), Postives = 38/49 (77.55%), Query Frame = 2
Query:  587 GDETQWSYYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            GD+T+WSYYKVVIPL QLKAVNPS     PAEKYIQVISVDN  F   G
Sbjct:  228 GDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFMG 276          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.094e-41
Identity = 72/188 (38.30%), Postives = 108/188 (57.45%), Query Frame = 3
Query:   45 QQEPHSSDYAPYPKIDPNDVAPPPQNWSNVSTATGPAPI----NESAATTMPAESN-----PYVSPSPIEPSSSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSDDPLSY 581
            Q++P + +    P  +P+  +P  + W         AP+    N+ AA  +  ++      PYV  SP+E  ++ N LE V G+   W +KA       E +A N+W +LKTGPS+++ A G++    K + +GG+E +FRQ F T P E L KT+ACYLST+ GPV G +YLS A++AFCSD PL +
Sbjct:   15 QEQPKTLETEHQP--EPSSSSPDQKKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPTTNNPLEPVIGMFHTWSRKA-------ETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYF 193          

HSP 2 Score: 50.8322 bits (120), Expect = 3.094e-41
Identity = 22/47 (46.81%), Postives = 29/47 (61.70%), Query Frame = 2
Query:  593 ETQWSYYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            +  WSYY+VV+PL+ +  VNP   K  P EKYIQ+ +VD   F   G
Sbjct:  199 QESWSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMG 245          

HSP 3 Score: 23.483 bits (49), Expect = 3.094e-41
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  712 HEFWFMGLVH 741
            H+FWFMG V+
Sbjct:  239 HDFWFMGFVN 248          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.469e-31
Identity = 55/123 (44.72%), Postives = 85/123 (69.11%), Query Frame = 3
Query:  198 NPYVSPSPIEPSSSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSD 566
            NPYV  +    +S K   + V  VL+  GKK  +AT++AE L G +  HLK  PS++DAA+ R++Q TK++ EGG E++F++ F  +  E+LL ++ CY+ST++GPV GV+Y+S  ++AFCSD
Sbjct:   29 NPYVHITSPTSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSD 151          

HSP 2 Score: 35.8094 bits (81), Expect = 1.469e-31
Identity = 14/43 (32.56%), Postives = 27/43 (62.79%), Query Frame = 2
Query:  605 SYYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            +YYKVV+   ++ +++ ST   KP+E+Y+ +++ D   F   G
Sbjct:  167 AYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMG 209          

HSP 3 Score: 21.9422 bits (45), Expect = 1.469e-31
Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = 1
Query:  715 EFWFMGLVHMI 747
            EFWFMG V  I
Sbjct:  204 EFWFMGFVSYI 214          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 7.042e-21
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 3
Query:  228 PSSSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSD 566
            P+SSK    + KG      KK    T  A D         K GP L +    +++   K+L  GG EKI+++ F    +E+L K Y CYLST+AGP+ G+L++S+ K+AFCS+
Sbjct:   36 PTSSKVSYLTGKGKSMLRKKKTDSFTNGARDQD-------KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSE 141          

HSP 2 Score: 43.1282 bits (100), Expect = 7.042e-21
Identity = 17/42 (40.48%), Postives = 28/42 (66.67%), Query Frame = 2
Query:  608 YYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            +YKV IPL ++  VN S    KP++KY++++++DN  F   G
Sbjct:  157 HYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMG 198          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.550e-20
Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  171 AATTMPAESNPYVSPSPIE----PSSSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSD 566
            A  T PA   P   P+ I     P+SSK    + KG       K+    K+ +     +    K GP L +    +++   ++L  GG EKI+++ F    EE+L K Y CYLST+AGP+ G+L++S+ K+AFCS+
Sbjct:   15 AVKTSPAGYLP--DPASINKLQIPTSSKFSFLTGKG-------KSMLRKKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSE 141          

HSP 2 Score: 41.9726 bits (97), Expect = 1.550e-20
Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = 2
Query:  608 YYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            +YKV IPL ++  VN S    KP++KY++V++VD   F   G
Sbjct:  157 HYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMG 198          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.505e-20
Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 3
Query:  186 PAESNPYVSPSPIEPSSSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSD 566
            PA  N +  P+    SS K++  +VK +L           K+ +     +    K  P L +    +++   ++L  GG EKIF++ F     E+L K Y CYLST+AGP+ G+L++S+ K+AFCS+
Sbjct:   27 PASFNKFRVPA----SSKKSEQSNVKSILKR---------KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSE 140          

HSP 2 Score: 40.817 bits (94), Expect = 7.505e-20
Identity = 18/42 (42.86%), Postives = 27/42 (64.29%), Query Frame = 2
Query:  608 YYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            +YKV IPL ++  VN S    KP++KY++V++VD   F   G
Sbjct:  156 HYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMG 197          
BLAST of EY649639 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.316e-19
Identity = 40/126 (31.75%), Postives = 68/126 (53.97%), Query Frame = 3
Query:  201 PYVSPSPI----EPSSSKNKLESVKGVLSNWGKKAAEATKRAEDLAGNMWQHLKTGPSLADAAVGRIAQRTKVLAEGGYEKIFRQSFDTVPEEQLLKTYACYLSTSAGPVVGVLYLSTAKLAFCSD 566
            P V+ +P+    +P+S  NKL+     +    K +    K+ +          K GP L +    +++   K+L  GG EKI+++ F    +E+L K Y CYLST+ G + G+L++S+ K+AFCS+
Sbjct:   14 PAVNTAPVGYLPDPASI-NKLQ-----IPTSSKVSMLQKKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSE 133          

HSP 2 Score: 42.743 bits (99), Expect = 5.316e-19
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 2
Query:  587 GDETQWSYYKVVIPLSQLKAVNPSTCKAKPAEKYIQVISVDNMSFGSWG 733
            GD T+  +YKV IPL ++  VN S    KP+++Y++V++VDN  F   G
Sbjct:  143 GDLTR-VHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMG 190          

HSP 3 Score: 20.7866 bits (42), Expect = 5.316e-19
Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 1
Query:  712 HEFWFMGLV 738
            ++FWFMG V
Sbjct:  184 YDFWFMGFV 192          
The following BLAST results are available for this feature:
BLAST of EY649639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
GEML1_ARATH2.760e-8070.06GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1... [more]
GEML3_ARATH3.157e-5358.44Putative GEM-like protein 3 OS=Arabidopsis thalian... [more]
GEM_ARATH8.558e-5355.61GLABRA2 expression modulator OS=Arabidopsis thalia... [more]
GEML5_ARATH3.094e-4138.30GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g... [more]
GEML2_ARATH1.469e-3144.72GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g... [more]
GEML6_ARATH7.042e-2138.05GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g... [more]
GEML8_ARATH1.550e-2034.56Putative GEM-like protein 8 OS=Arabidopsis thalian... [more]
GEML4_ARATH7.505e-2033.07GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g... [more]
GEML7_ARATH5.316e-1931.75GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-H02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649639 ID=EY649639; Name=EY649639; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGAAAGCTTCTTCAGATACCCATCATATGCAGCAGCAGCAA
GAACCTCACTCATCTGACTACGCTCCTTACCCTAAGATTGACCCAAACGA
CGTCGCTCCACCTCCTCAAAATTGGTCGAACGTGTCCACGGCCACGGGGC
CAGCGCCTATCAACGAGAGTGCCGCCACCACCATGCCTGCAGAATCCAAT
CCCTACGTGTCCCCCTCTCCGATTGAGCCATCCTCCTCAAAGAATAAGCT
GGAGTCAGTGAAGGGCGTGTTGTCAAATTGGGGGAAGAAGGCAGCGGAGG
CTACGAAGAGAGCTGAGGATCTCGCCGGCAATATGTGGCAGCACTTGAAA
ACTGGCCCTAGTCTTGCTGATGCTGCCGTGGGAAGAATTGCACAGAGAAC
AAAAGTGCTCGCTGAAGGTGGATACGAGAAGATCTTTCGACAAAGTTTTG
ACACTGTTCCTGAGGAACAACTTCTGAAGACTTACGCATGCTACCTATCC
ACATCTGCCGGTCCCGTAGTGGGAGTTTTATATTTGTCAACTGCAAAGCT
TGCATTTTGTAGTGATGACCCTCTGTCTTACAAGTAGGTGATGAGACGCA
ATGGAGCTATTATAAGGTGGTTATTCCATTGAGTCAGCTGAAGGCAGTCA
ATCCCTCAACATGCAAAGCCAAGCCAGCTGAGAAATATATCCAGGTCATC
TCTGTTGACAACATGAGTTTTGGTTCATGGGGCTTGTGCATATGATAGGG
CGGGAAAAATCTTTGGGAGCATTGGGCCTCGTAGCTATGATGCGTTTGGG
GTCAAATCATTTGACCATGGCTGGAGAGTGGCCTTCACCATTGGTAATGT
AGATAAACATATGCTGGCATTGCAAATTTTCCCAAAAGGGGTTCCCAGGG
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