EY649637

Overview
NameEY649637
Unique NameEY649637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649637_ssr829 microsatellite EY649637_ssr829:829..844. BLAST: Citrus ESTs to Prunus persica proteins V1
EY649637_ssr32 microsatellite EY649637_ssr32:32..43. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6926 contig Csv1_Contig6926:1..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY649637 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.803e-11
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 1 
Query:  334 LPKLSSYCRETPKLSSNITITCLVDKGTPHISGIIMESVGLTGKIPERVAALTYLQILDLSDNTIHGSIPYQIGYLVQLITLDLSKNQLTGTIPTSLGNLRNLXML 651
            LPKLS        L+  I  +  VD G  ++  +I+ +  LTG +PE ++  T +  + LS N + G IP  IG L +L  L L  N LTG IP+ LGN +NL  L
Sbjct:  449 LPKLSDLVMWANNLTGGIPESICVDGG--NLETLILNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLGNNSLTGNIPSELGNCKNLIWL 552
The following BLAST results are available for this feature:
BLAST of EY649637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BRL3_ARATH5.803e-1138.68Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-G11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649637 ID=EY649637; Name=EY649637; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGCCCACGCGTCCGAGCTGGCTAGTGAGTGAGTGAGCGAAC
TGAAAGTTTAGAACAGCCAGCTAGGAATTAAAAGTTAAAAATAAATAAAA
TAAAATGGATGAACGTTATGCTGGGCATCGCGTGGTTCTAATTTCTAAGA
CTGTGTTCTTAGTAATTTTGTTTCTTCTTTGTCAACTTGGCTCCGAGTTC
AAATTTCAGAGTGCTGCTGAAAATGATACTAAAGTAGGTGACCTACCTGG
TCATGAAGACTCGGGATAACACCATATAGTATTAAGTGGCCGGTCTGACG
GAAATGATGTCCAGTTTGCAGTGGAGGGCACAACTACCTAAATTGAGTTC
ATATTGCCGTGAGACGCCAAAGCTTAGTTCCAATATTACCATCACTTGCC
TCGTCGATAAAGGGACCCCGCACATCTCCGGCATAATCATGGAGAGTGTA
GGCTTAACTGGAAAAATCCCAGAACGTGTGGCTGCTCTGACATACCTGCA
GATACTCGATCTATCCGACAACACAATTCATGGTTCCATTCCTTACCAGA
TTGGGTATTTAGTTCAGCTTATCACTCTAGATTTATCAAAAAATCAATTA
ACTGGGACCATACCAACAAGCTTGGGGAATTTGAGGAACCTANAAATGCT
TTGGCCAGGCCCTTGGGGGCCAACTGCCAATAACAGACGGCATTGAATTT
GAAGAGGATCCAAATCGGTGAAGTGTCATGCCATCCCAAAGGAATTTAGT
CGACATTTCAAATTTTAAGATTCAATTTTAGGATGTTTATCATTACTATA
TATTTTGTACATTATGCATGCTTGTTCAACACACACACACACACAAAGAG
ATATGAAATCTCATAGATAGAAGATTTTTGTTCCCTTCTTTTCTCTACTA
TGAGTATC
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