EY649628

Overview
NameEY649628
Unique NameEY649628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7210 contig Csv1_Contig7210:38..934. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 8.417e-99
Identity = 170/229 (74.24%), Postives = 185/229 (80.79%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGT EEVKKI++ LN                   FL LVK+ LRP FHVAAQNCWVK GGAFTGE+SAEMLVNL IPWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLE+RE+GSTM+VVAAQTKAIADRV  W+N+V+AYEPVWAIGTG VA+PA AQEVH EL KWL AN SPE+AA+TRIIYGGSVNGA  +EL  QPD D F V
Sbjct:    4 KFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEERESGSTMDVVAAQTKAIADRVKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHAELRKWLAANVSPEVAASTRIIYGGSVNGANCKELGGQPDVDGFLV 232          

HSP 2 Score: 38.1206 bits (87), Expect = 8.417e-99
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 3
Query:  681 FXFGGASLKPXFIDIIKSAELK*NS 755
            F  GGASLKP FIDIIK+AE+K N+
Sbjct:  230 FLVGGASLKPEFIDIIKAAEVKRNA 254          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 3.200e-95
Identity = 166/229 (72.49%), Postives = 184/229 (80.35%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGT+EEVKKIV++LNE +                FL  VK+ LR  FHVAAQNCWVK GGAFTGE+SAEMLVNL IPWVILGHSERR +LNE NEFVGDK AYALSQGLKVIACVGETLEQREAGST+ VVAAQTKAIA++VS W+NIV+AYEPVWAIGTG VA+PA AQEVHFEL KW+  N   ++A + RIIYGGSVNGA  +ELA QPD D F V
Sbjct:    4 KFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQGLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPAQAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLV 232          

HSP 2 Score: 35.4242 bits (80), Expect = 3.200e-95
Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  681 FXFGGASLKPXFIDIIKSAELK 746
            F  GGASLKP F+DIIKSA +K
Sbjct:  230 FLVGGASLKPEFVDIIKSATVK 251          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3)

HSP 1 Score: 337.806 bits (865), Expect = 5.018e-92
Identity = 167/229 (72.93%), Postives = 183/229 (79.91%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGTT++V+KIV  LNEGQ                FL +VKS LR  FHVAAQNCWVK GGAFTGE+SAEMLVNL +PWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLEQREAGSTM+VVAAQTKAIA+++  WSN+V+AYEPVWAIGTG VATPA AQEVH  L  WL  N SPE+A +TRIIYGGSV  A  +ELAAQPD D F V
Sbjct:    4 KFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEMLVNLGVPWVILGHSERRALLGESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQAQEVHASLRDWLKTNASPEVAESTRIIYGGSVTAANCKELAAQPDVDGFLV 232          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 337.806 bits (865), Expect = 5.018e-92
Identity = 169/229 (73.80%), Postives = 185/229 (80.79%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGT EEVKKIV+ LNE Q                FL LVKS+LR  F VAAQNCWVK GGAFTGE+SAEMLVNL+IPWVILGHSERR ILNE +EFVGDKVAYAL+QGLKVIACVGETLE+REAGSTM+VVAAQTKAIADRV++WSN+V+AYEPVWAIGTG VA+PA AQEVH EL KWL  N S ++AA TRIIYGGSVNG   +EL  Q D D F V
Sbjct:    4 KFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAIGTGKVASPAQAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQADVDGFLV 232          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3)

HSP 1 Score: 332.798 bits (852), Expect = 1.614e-90
Identity = 165/229 (72.05%), Postives = 183/229 (79.91%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGTT++V KIV +LNEGQ                FL +VKS LRP   VAAQNCWVK GGAFTGE+SAEMLVNL IPWVILGHSERR +L E NEFVGDKVAYALSQGLKVIACVGETLEQRE+GSTM+VVAAQTKAI++R+  W+N+V+AYEPVWAIGTG VATP  AQEVH  L KWL AN S E+A +TRIIYGGSV GA  +ELAA+PD D F V
Sbjct:    4 KFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGANCKELAAKPDVDGFLV 232          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3)

HSP 1 Score: 321.242 bits (822), Expect = 3.849e-90
Identity = 160/229 (69.87%), Postives = 177/229 (77.29%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGT  +V+ IV+ LN GQ                FL  VK  LRP   VAAQNCWVK GGAFTGE+SAEMLVNL IPWVILGHSERR +L E +EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTMEVVA QTKAIAD++  W+N+V+AYEPVWAIGTG VA+PA AQEVH  L  WL  N SPE+A +TRIIYGGSV GA  +ELAAQPD D F V
Sbjct:    4 KFFVGGNWKCNGTVSQVETIVNTLNAGQIASPDVVEVVVSPPYVFLPTVKDKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRSLLAESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQPDVDGFLV 232          

HSP 2 Score: 32.7278 bits (73), Expect = 3.849e-90
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  681 FXFGGASLKPXFIDIIKSAELK 746
            F  GGASLKP FIDII +A +K
Sbjct:  230 FLVGGASLKPEFIDIINAATVK 251          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 317.39 bits (812), Expect = 5.493e-89
Identity = 159/229 (69.43%), Postives = 175/229 (76.42%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGT E+V+ IV  LN GQ                FL +VK+ LRP   VAAQNCWVK GGAFTGE+SAEML NL +PWVILGHSERR +L E +EFVG+KVAYAL+QGLKVIACVGETLEQREAGSTMEVVA QTKAIA ++  WSN V+AYEPVWAIGTG VATPA AQEVH  L  WL  N SPE+A +TRIIYGGSV GA  +ELAAQ D D F V
Sbjct:    4 KFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIAGKIKDWSNGVVAYEPVWAIGTGKVATPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQADVDGFLV 232          

HSP 2 Score: 32.7278 bits (73), Expect = 5.493e-89
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  681 FXFGGASLKPXFIDIIKSAELK 746
            F  GGASLKP FIDII +A +K
Sbjct:  230 FLVGGASLKPEFIDIINAAAVK 251          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.982e-72
Identity = 133/171 (77.78%), Postives = 147/171 (85.96%), Query Frame = 2
Query:  176 VAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            VAAQNCWVK GGAFTGE+SAEML NL +PWVILGHSERR +LNE NEFVGDKVAYALSQGLKVIACVGETLEQREAG+TMEVVAAQTKAIAD++SSW N+VLAYEPVWAIGTG VA+PA AQEVH  L KW   N S E++A+TRIIYGGSV+G+  +EL  Q D D F V
Sbjct:    3 VAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRALLNETNEFVGDKVAYALSQGLKVIACVGETLEQREAGTTMEVVAAQTKAIADKISSWDNVVLAYEPVWAIGTGKVASPAQAQEVHAGLRKWFCDNVSAEVSASTRIIYGGSVSGSNCKELGGQTDVDGFLV 173          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.268e-68
Identity = 135/230 (58.70%), Postives = 151/230 (65.65%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGT E V KIV  LNE                  FL    + L+    VAAQNCWVK GGAFTGE+SA+ML NL I WVILGHSERR +L E NEFVG K AYA S+GL VIAC+GE LE+REAG T +V   Q K+ A      W N+V+AYEPVWAIGTG VA+P  AQEVH  +  WL  N S E+A+ TRIIYGGSVNG     LAAQ D D F V
Sbjct:    4 KFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQMLANLGITWVILGHSERRTLLGESNEFVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKTNVSEEVASKTRIIYGGSVNGGNSLALAAQEDVDGFLV 233          
BLAST of EY649628 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 8.619e-68
Identity = 130/229 (56.77%), Postives = 153/229 (66.81%), Query Frame = 2
Query:    2 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHVAAQNCWVKIGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGNVATPAHAQEVHFELXKWLLANTSPEIAAATRIIYGGSVNGAKLQELAAQPDXDXFXV 688
            KFFVGGNWKCNGT E + K+VS LN                   ++  VKSSL     ++AQNCW+  GGAFTGEIS E L +L   WVILGHSERR ++ E NEF+G K AYAL+QG+ VIAC+GE LE+REAG T +V   Q KA AD + SW N+V+AYEPVWAIGTG VA+P  AQEVH  +  WL  N S E+A+ TRIIYGGSVNG    ELA Q D D F V
Sbjct:   72 KFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFV--YIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKDLGCQWVILGHSERRHVIGEQNEFIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDIDGFLV 298          
The following BLAST results are available for this feature:
BLAST of EY649628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_PETHY8.417e-9974.24Triosephosphate isomerase, cytosolic OS=Petunia hy... [more]
TPIS_COPJA3.200e-9572.49Triosephosphate isomerase, cytosolic OS=Coptis jap... [more]
TPIS_MAIZE5.018e-9272.93Triosephosphate isomerase, cytosolic OS=Zea mays P... [more]
TPIS_ARATH5.018e-9273.80Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_ORYSJ1.614e-9072.05Triosephosphate isomerase, cytosolic OS=Oryza sati... [more]
TPIS_SECCE3.849e-9069.87Triosephosphate isomerase, cytosolic OS=Secale cer... [more]
TPIS_HORVU5.493e-8969.43Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_LACSA1.982e-7277.78Triosephosphate isomerase, cytosolic (Fragment) OS... [more]
TPIS_STELP2.268e-6858.70Triosephosphate isomerase, cytosolic OS=Stellaria ... [more]
TPIC_SPIOL8.619e-6856.77Triosephosphate isomerase, chloroplastic OS=Spinac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-G02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649628 ID=EY649628; Name=EY649628; organism=Citrus sinensis; type=EST; length=897bp
GAAGTTCTTCGTCGGCGGTAACTGGAAATGCAATGGAACAACTGAAGAAG
TGAAAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCCATCTTCTGAT
GTCGTTGAGGTCGTTGTTAGCCCTCCGTTTGTGTTTCTTGGACTGGTGAA
GAGTTCGTTGAGGCCTGGCTTTCATGTTGCGGCACAGAATTGCTGGGTCA
AGATAGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAATGCTCGTCAAT
TTGGAAATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGAGACTCATTTT
GAATGAATTAAATGAGTTTGTTGGGGATAAGGTTGCATATGCACTTTCTC
AAGGTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGAGCAGCGTGAA
GCAGGATCTACTATGGAAGTTGTTGCTGCACAAACTAAAGCAATCGCAGA
TCGAGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAACCTGTGTGGG
CTATTGGAACTGGGAATGTTGCCACTCCAGCGCATGCTCAAGAAGTACAT
TTTGAACTGANGAAATGGCTTCTTGCAAACACCAGTCCTGAAATTGCTGC
AGCAACACGGATCATCTACGGAGGATCCGTAAATGGTGCAAAACTGCAGG
AATTGGCTGCACAGCCTGATGNTGACNGATTTTTNGTTTGGTGGTGCTTC
GTTGAAGCCCNGATTCATTGACATCATCAAATCTGCTGAGCTGAAGTAAA
ATTCTTGAGCCTTATTTCAAGCGCAGNTTGCTGATGAAGTATTTACTGGT
TGTGAATTATAGAATACGTTTGGGATATTTCAAAATACTTTTGGTTTTGA
TAACCGCGACCAACTGAACCTTTTTTAACTTTTTTATTATTCTTGGT
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