EY702805

Overview
NameEY702805
Unique NameEY702805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.698e-105
Identity = 189/249 (75.90%), Postives = 206/249 (82.73%), Query Frame = 3
Query:   96 IGVKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRIHNGLDLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842
            +GV EMLG PLN  +  R+SAP AS+PSTFK VALF                   ++ELAKWYGPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV AV+AE+VL+GGAEYYRI NGLD EDKLHPGG FDPLGLAKDP+Q ALLKV EIKNGRLAM AM GFF+ A   GEG
Sbjct:    4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSET---SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEG 249          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.579e-45
Identity = 99/201 (49.25%), Postives = 126/201 (62.69%), Query Frame = 3
Query:  276 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRIHNG----LDLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            ++YGPDR  FL  G    ++ PEYLTGE PGDYG+D  GLS  P  F++Y+  ELIHARWA+LGA G + PE  +++      E VWFK GA +     LNY G    I   +++  +  ++VL+G AE YR + G    LD  D L+PGG FDPLGLA DPD FA LKV EIKNGRLAM +  GFF+ A   G+G  + L
Sbjct:   32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNL 230          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.415e-43
Identity = 96/193 (49.74%), Postives = 124/193 (64.25%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842
            WYGPDR ++L        E P YLTGE PGDYG+D  GLS  P++F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK GA +     L+Y G    +    + A+ A +++L+G  E YRI  G   ++ D ++PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G
Sbjct:   58 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 246          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.153e-43
Identity = 96/193 (49.74%), Postives = 124/193 (64.25%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEG 842
            WYGPDR ++L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK GA +     L+Y G  + I    + A+ A +++L+G  E YR+  G   ++ D ++PGG+FDPLGLA DPD FA LKV EIKNGRLAM +M GFF+ A   G+G
Sbjct:   62 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 250          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.153e-43
Identity = 98/198 (49.49%), Postives = 123/198 (62.12%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE F + G   G EAVWFK G+ +     L+Y G    +    + A+ A ++VL+G  E YR+  G   ++ D L+PGGSFDPLGLA DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G    L
Sbjct:   50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 243          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.118e-43
Identity = 97/198 (48.99%), Postives = 124/198 (62.63%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ FSK +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    +    + A+ A +++L+G  E YRI  G   ++ D L+PGGSFDPLGLA DP+ FA LKV E+KNGRLAM +M GFF+ A   G+G    L
Sbjct:   52 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 245          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.118e-43
Identity = 97/198 (48.99%), Postives = 124/198 (62.63%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ FSK +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    +    + A+ A +++L+G  E YRI  G   ++ D L+PGGSFDPLGLA DP+ FA LKV E+KNGRLAM +M GFF+ A   G+G    L
Sbjct:   53 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 246          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.378e-43
Identity = 98/198 (49.49%), Postives = 123/198 (62.12%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE P DYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE F + G   G EAVWFK GA +     L+Y G    +    + A+ A ++VL+G  E YR+  G   ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G    L
Sbjct:   51 WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 244          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.024e-43
Identity = 98/198 (49.49%), Postives = 124/198 (62.63%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YRI  G   ++ D L+PGGSFDPLGLA+DP+ FA LKV EIKNGRLAM +M GFF+ A   G+G    L
Sbjct:   49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 242          
BLAST of EY702805 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.024e-43
Identity = 98/198 (49.49%), Postives = 124/198 (62.63%), Query Frame = 3
Query:  279 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIHNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVNEIKNGRLAMLAMPGFFLPA*APGEGQWRTL 857
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    I    + A+ A ++VL+G  E YRI  G   ++ D L+PGGSFDPLGLA DP+ FA LKV E+KNGRLAM +M GFF+ A   G+G    L
Sbjct:   46 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 239          
The following BLAST results are available for this feature:
BLAST of EY702805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CB26_ARATH1.698e-10575.90Chlorophyll a-b binding protein CP26, chloroplasti... [more]
CB2_DUNTE2.579e-4549.25Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB2B_PINSY1.415e-4349.74Chlorophyll a-b binding protein type 2 member 1B, ... [more]
CB2A_PINSY3.153e-4349.74Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB24_PETSP3.153e-4349.49Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB28_PEA4.118e-4348.99Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB22_PEA4.118e-4348.99Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB23_PETSP5.378e-4349.49Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB2B_SOLLC7.024e-4349.49Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB21_MAIZE7.024e-4349.49Chlorophyll a-b binding protein 1, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-D11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702805 ID=EY702805; Name=EY702805; organism=Citrus sinensis; type=EST; length=874bp
TCCGTCGACCCCGCGTCCGCTCTAACCTAACAAGCAGCAGCAGCAACACT
CTGAAGATGGCTTCATTGGCAGCATCGTCCACTCCTGCTGCCTCCATTGG
AGTTAAGGAGATGCTTGGCAACCCTCTCAATGTCAGCAGTGCTGTTAGGA
CTTCAGCTCCAGGTGCATCAAACCCTTCTACTTTCAAGCCCGTTGCTCTC
TTCTCCAAGAAGAAAGCCGCCCCTCCTGCCAAGTCTAAGCCCGTCGCCGT
CTCCCCCGTTAACGAAGAGCTCGCCAAGTGGTATGGTCCTGACCGAAGAA
TTTTCTTGCCCGAGGGTCTCTTGGACAGATCTGAGATCCCTGAGTACTTG
ACCGGAGAAGTTCCCGGAGACTATGGTTACGATCCTTTTGGTCTCAGCAA
GAAACCAGACGACTTCAGCAAATATCAGGCATATGAATTGATTCATGCCA
GATGGGCCATGCTTGGTGCTGCTGGTTTCATCATTCCTGAAGCCTTTAAC
AAGTTTGGTGCTAACTGTGGTCCTGAAGCTGTCTGGTTCAAGACTGGAGC
TCTACTTCTTGATGGAAACACATTGAACTACTTCGGAAAGAACATCCCAA
TCAACCTTGTTTTTGCTGTCATTGCTGAGATTGTTCTTGTAGGTGGTGCT
GAATATTATAGAATCCACAACGGTTTGGATTTGGAAGACAAGCTTCACCC
AGGTGGCTCATTTGACCCCCTGGGATTAGCAAAGGATCCTGACCAATTTG
CATTGCTAAAAGTGAACGAGATCAAGAATGGAAGACTTGCCATGCTTGCC
ATGCCTGGGTTCTTTCTCCCAGCTTAGGCACCAGGGGAAGGCCAGTGGAG
AACCTTGCTAAACATTCACGGAAT
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