EY649623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH12_MOUSE (Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.599e-23 Identity = 60/165 (36.36%), Postives = 74/165 (44.85%), Query Frame = 2 Query: 149 TDGIDATNLTAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI 643 T + VITG +GIG ETAR LA R I + ++V KLDLS SI+ FA+ F M CPY + DG E F NH+GHFLLT LLL+ + +A R+VNLSSIAH G IRF + Sbjct: 32 TTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLERLKESA-----PARVVNLSSIAHLI---GKIRFHDL 188 HSP 2 Score: 40.0466 bits (92), Expect = 6.599e-23 Identity = 19/57 (33.33%), Postives = 37/57 (64.91%), Query Frame = 1 Query: 655 REEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALLQ 825 R +G +TA +VHPG++++ + ++S ++ + FS F +K+ QGA T+ + AL + Sbjct: 217 RLQGTGVTAYAVHPGVVLSEITRNSYLLCLLWRLFSPF-FKSTSQGAQTSLHCALAE 272
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH12_BOVIN (Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.891e-22 Identity = 58/154 (37.66%), Postives = 73/154 (47.40%), Query Frame = 2 Query: 182 VITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI 643 VITG +GIG ETAR LA R I + ++V KLDLS SI+ FA+ F M CPY + DG E A NH+GHFLLT+LLL + +A R+VNLSS+AH + G IRF + Sbjct: 43 VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRLKESA-----PARVVNLSSVAH---HLGKIRFHDL 188 HSP 2 Score: 39.6614 bits (91), Expect = 1.891e-22 Identity = 20/57 (35.09%), Postives = 34/57 (59.65%), Query Frame = 1 Query: 655 REEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALLQ 825 R +G +T +VHPG++ + L +HS ++ + FS FL K +GA T+ + AL + Sbjct: 217 RLKGTGVTTYAVHPGIVRSKLVRHSFLLCLLWRLFSPFL-KTTWEGAQTSLHCALAE 272
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 4.165e-22 Identity = 56/165 (33.94%), Postives = 74/165 (44.85%), Query Frame = 2 Query: 149 TDGIDATNLTAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI 643 T + V+TG +GIG ETA+ LA R + I +V KLDLS SI+ FA+ F M CPY + DG EM NH+GHFLLT+LLL+ + +A RIVN+SS+AH + G I F + Sbjct: 34 TSTVQLPGKVVVVTGANTGIGKETAKELAQRGARVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDLSDTKSIRAFAKGFLAEEKHLHVLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA-----PSRIVNVSSLAH---HLGRIHFHNL 190 HSP 2 Score: 41.9726 bits (97), Expect = 4.165e-22 Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 1 Query: 655 REEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALLQ 825 R +G +T SVHPG + + L +HS+ + FSFF+ K QGA T+ + AL + Sbjct: 219 RLKGSGVTTYSVHPGTVQSELVRHSSFMRWMWWLFSFFI-KTPQQGAQTSLHCALTE 274
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH11_MOUSE (Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.628e-21 Identity = 55/165 (33.33%), Postives = 76/165 (46.06%), Query Frame = 2 Query: 149 TDGIDATNLTAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKI 643 T + A++TG +GIG ETA+ LA R + I ++V KLDL+ SI+ FA++F M CPY + DG EM NH+GHFLLT+LLL+ + +A RIVNLSS+ H + G I F + Sbjct: 31 TSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLTHLLLEKLKESA-----PSRIVNLSSLGH---HLGRIHFHNL 187 HSP 2 Score: 38.1206 bits (87), Expect = 2.628e-21 Identity = 21/57 (36.84%), Postives = 33/57 (57.89%), Query Frame = 1 Query: 655 REEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALLQ 825 R +G +T SVHPG + + L ++S+ +MR+L F K +GA T+ Y AL + Sbjct: 216 RLKGSGVTTYSVHPGTVHSELTRYSS-IMRWLWQLFFVFIKTPQEGAQTSLYCALTE 271
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH12_HUMAN (Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 7.525e-21 Identity = 55/155 (35.48%), Postives = 71/155 (45.81%), Query Frame = 2 Query: 155 GIDATNL-----TAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAH 604 G+ TN+ VITG +GIG ETAR LA R I + ++V KLDLS SI+ FA+ F M CPY + DG E NH+GHFLLT LLL+ + +A R+VN+SS+AH Sbjct: 29 GVCRTNVQLPGKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGVNHLGHFLLTYLLLERLKVSA-----PARVVNVSSVAH 178 HSP 2 Score: 40.4318 bits (93), Expect = 7.525e-21 Identity = 19/57 (33.33%), Postives = 35/57 (61.40%), Query Frame = 1 Query: 655 REEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLWKNVPQGAATTCYVALLQ 825 R +G +T +VHPG++ + L +HS+++ + FS F+ K +GA T+ + AL + Sbjct: 217 RLQGTGVTTYAVHPGVVRSELVRHSSLLCLLWRLFSPFV-KTAREGAQTSLHCALAE 272
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.441e-18 Identity = 61/190 (32.11%), Postives = 80/190 (42.11%), Query Frame = 2 Query: 77 GIVSLITGRPGSSGFGSASTAEQVTDGIDATNLTAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN 646 G LITG +SG G A+ AE + G VI G E A R+ +LI++E LDL+S+ S++ F Q CPY +EDG EMQF NH+GHFLLTNLLL + +A RIV +SS ++Y G I F +N Sbjct: 43 GKTVLITG--ANSGLGRATAAELLRLG------ARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSGVGELIVRE----------LDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYKY---GDINFDDLN 206 HSP 2 Score: 43.8986 bits (102), Expect = 1.441e-18 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 1 Query: 655 REEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLW---KNVPQGAATTCYVA 816 R EG N+T N +HPG++ TNL +H + + F+ W K +GA T+ Y+A Sbjct: 234 RLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEGAQTSIYLA 290
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.120e-18 Identity = 44/117 (37.61%), Postives = 59/117 (50.43%), Query Frame = 2 Query: 296 QLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN 646 QL++KE LDL+S+ S++ F Q CPY +EDG EMQF NH+GHFLLTNLLL + +A RIV +SS ++Y G I F+ +N Sbjct: 106 QLVVKE----------LDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSA-----PSRIVVVSSKLYKY---GEINFEDLN 204 HSP 2 Score: 43.1282 bits (100), Expect = 4.120e-18 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 1 Query: 655 REEGVNITANSVHPGLIMTNLFKHSAVVMRFLKFFSFFLW---KNVPQGAATTCYVA 816 R EG N+T N +HPG++ TNL +H + + F+ W K +GA T+ Y+A Sbjct: 232 RLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTPLEGAQTSIYLA 288
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH13_MOUSE (Retinol dehydrogenase 13 OS=Mus musculus GN=Rdh13 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.772e-17 Identity = 58/157 (36.94%), Postives = 79/157 (50.32%), Query Frame = 2 Query: 176 TAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN 646 T ++TG +GIG +TA LA R + I E RV +LDL+S+ SI++FA+ M CP+ +EDG EMQF N++GHFLLTNLLLD + +A RI+NLSS+AH G I F+ +N Sbjct: 40 TVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAKDIRGETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGFEMQFGVNYLGHFLLTNLLLDKLKASA-----PSRIINLSSLAH---VAGHIDFEDLN 188
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: RDH13_HUMAN (Retinol dehydrogenase 13 OS=Homo sapiens GN=RDH13 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.023e-17 Identity = 58/157 (36.94%), Postives = 76/157 (48.41%), Query Frame = 2 Query: 176 TAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKIN 646 T ++TG +GIG +TA LA R + I E V+ LDL+S+ SI++FA M CP+ +EDG EMQF NH+GHFLLTNLLLD + +A RI+NLSS+AH G I F +N Sbjct: 40 TVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKASA-----PSRIINLSSLAH---VAGHIDFDDLN 188
BLAST of EY649623 vs. ExPASy Swiss-Prot
Match: WWOX_HUMAN (WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.796e-17 Identity = 56/181 (30.94%), Postives = 84/181 (46.41%), Query Frame = 2 Query: 119 FGSASTAEQVTDGIDATNLTAVITGGASGIGLETARVLALRKXXXXXXXXXXXXXXXXKQLILKEDDTARVDTLKLDLSSIASIKDFAQNFXXXXXXXXXXXXXXXXMFCPYQISEDGIEMQFATNHIGHFLLTNLLLDTMNRTAKETGIEGRIVNLSSIAHQYTYKGGIRFQKINDRAGK 661 + ++TA ++ G D T V+TG SGIG ETA+ AL IL+E A+V+ + LDL+ + S++ FA+ F P+ +++DG+E F NH+GHF L LL D + R+A R++ +SS +H RF IND GK Sbjct: 107 YDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVSRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLETTFQVNHLGHFYLVQLLQDVLCRSA-----PARVIVVSSESH--------RFTDINDSLGK 274 The following BLAST results are available for this feature:
BLAST of EY649623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649623 ID=EY649623; Name=EY649623; organism=Citrus sinensis; type=EST; length=881bpback to top |