EY649619

Overview
NameEY649619
Unique NameEY649619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8677 contig Csv1_Contig8677:89..978. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: KASM_ARATH (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 8.175e-76
Identity = 146/238 (61.34%), Postives = 173/238 (72.69%), Query Frame = 1
Query:   55 MSNSSWRRLFFTRRFDLSRYFSSSSRAEVFDXXXXXXXXXXXXTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGN 768
            M+ S+ RR     R  L+R+ S+SS                  TG+GMVTPLG G ETTWRRLI GECGIR +T +DLKM +FD ET+L+ F QL+SKVAA VP G + GEF+E  WLNSK   ++A FI YA+CAADEAL DA+WLP+++ +KERTGV          D V+AA +ICEKRLRRL PFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDA RMIQ G+
Sbjct:    1 MATSNLRRHLSASRLRLNRFISTSSSYH--------SHRRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWLNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGD 227          

HSP 2 Score: 25.409 bits (54), Expect = 8.175e-76
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  762 GKSNGMGAGGTESSIDA 812
            G ++ M AGGTESSIDA
Sbjct:  226 GDADVMVAGGTESSIDA 242          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: FABF_RHIME (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti GN=fabF PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.366e-39
Identity = 90/220 (40.91%), Postives = 125/220 (56.82%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISS-GEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGNQ--MAWGLGALSPVLMLIYGRFCS 834
            TG GMV+PLGCG E +W RL+ G+   R++T  +++               L +K+A  +P G  S G FN D W+  K+ R +  FI YA+ AAD AL DA W P     +  TGV            VDA   + +K  RR+ PFFIP  LIN+A+G VS+++  +GPNH+ VTAC+TGAH+IGDA+R+I LG+   M  G G  SP+  +    F +
Sbjct:    7 TGTGMVSPLGCGTEVSWARLLTGDNAARKVTEFEVE--------------DLPAKIACRIPFGDGSDGTFNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPESDEDQISTGVLIGSGIGGLEGIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGDASRLIALGDADVMVAG-GTESPICRISLAGFAA 211          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: OXSM_MOUSE (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.537e-32
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGN 768
            TGIG+VTPLG G +  W RL+ GE GI  +  ++ K               +   VAA VP G   G+FNE+++++  D +S++     A+ AA+ AL D+ W P  +  +  TGV             + A +   K   ++ PFF+P+ILINMA+G VS++Y  +GPNH+  TAC TGAH++GD+ R I  G+
Sbjct:   47 TGIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYK--------------NIPCSVAAYVPRGPHEGQFNEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPKREADQVATGVAIGMGMVPLEVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTGAHAVGDSFRFIAHGD 227          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: OXSM_HUMAN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.844e-32
Identity = 74/195 (37.95%), Postives = 106/195 (54.36%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGN 768
            TGIG+VTPLG G    W RLI GE GI  +  E+ K               +   VAA VP G   G+FNE ++++  D +S++     A+ AA+ A+ D+ W P  +  +  TGV             + A     K   ++ PFF+P+IL+NMA+G VS++Y  +GPNHA  TAC TGAH++GD+ R I  G+
Sbjct:   47 TGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYK--------------SIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGD 227          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: OXSM_BOVIN (3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.286e-31
Identity = 72/195 (36.92%), Postives = 106/195 (54.36%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGN 768
            TGIG+VTPLG G +  W RL+ GE GI  +  ++              +  +   VAA VP G   G+FNE +++   D +S++     A+ AA+ AL DA W P  +  +  TGV             + A     K   ++ PFF+P+IL+NMASG VS+++  +GPNHA  TAC TGAH++GD+ R +  G+
Sbjct:   48 TGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDE--------------YQSIPCSVAAYVPRGCDEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGMGMVPLEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGD 228          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: OXSM_SCHPO (Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe GN=SPBC887.13c PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.167e-30
Identity = 75/197 (38.07%), Postives = 108/197 (54.82%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREIT--PEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGN 768
            TG+G VTPLG G +T WR LI G+ GI  +   PE               + Q+ SKVA V+P G    E+N   +++    R +A F   AL +A EAL DA+W+  D+ +K  TGV          D ++   ++ +  +R++ P  I +ILINM +G++S +YGF   NH   TACA G H+IGDA   I+LG+
Sbjct:    7 TGLGAVTPLGNGVKTNWRNLIQGKSGIVSLKGFPE---------------YEQIPSKVAGVIPRGKEKEEWNVLDYVDQGKLREVATFTQLALTSAAEALKDARWIDIDEQEKLATGVCFGTGIGNLDDALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAGCHAIGDAFNFIKLGH 188          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: FABF_STAAW (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.430e-22
Identity = 73/222 (32.88%), Postives = 113/222 (50.90%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGNQMAWGLGALSPVL--MLIYGRFCSKEL 843
            TG+G ++P+G   +TTW   + G  GI +IT  D +         +H  G+L +              FN +  ++ K+ R + RF  YA+ AA EA+ DA+ L  ++   +R GV              A   + +K  RR+ PFF+P ++ +MA+G VS+  G +GPN A VTACATG +SIG+A +++Q G+  A   G     +  M I G   S+ L
Sbjct:   10 TGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTE------PYSVHLAGELKN--------------FNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQ-LDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRAL 210          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: FABF_STAAU (3-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragment) OS=Staphylococcus aureus GN=fabF PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.430e-22
Identity = 73/222 (32.88%), Postives = 113/222 (50.90%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGNQMAWGLGALSPVL--MLIYGRFCSKEL 843
            TG+G ++P+G   +TTW   + G  GI +IT  D +         +H  G+L +              FN +  ++ K+ R + RF  YA+ AA EA+ DA+ L  ++   +R GV              A   + +K  RR+ PFF+P ++ +MA+G VS+  G +GPN A VTACATG +SIG+A +++Q G+  A   G     +  M I G   S+ L
Sbjct:    3 TGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTE------PYSVHLAGELKN--------------FNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQ-LDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRAL 203          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: FABF_STAAS (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MSSA476) GN=fabF PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.430e-22
Identity = 73/222 (32.88%), Postives = 113/222 (50.90%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGNQMAWGLGALSPVL--MLIYGRFCSKEL 843
            TG+G ++P+G   +TTW   + G  GI +IT  D +         +H  G+L +              FN +  ++ K+ R + RF  YA+ AA EA+ DA+ L  ++   +R GV              A   + +K  RR+ PFF+P ++ +MA+G VS+  G +GPN A VTACATG +SIG+A +++Q G+  A   G     +  M I G   S+ L
Sbjct:   10 TGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTE------PYSVHLAGELKN--------------FNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQ-LDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRAL 210          
BLAST of EY649619 vs. ExPASy Swiss-Prot
Match: FABF_STAAR (3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MRSA252) GN=fabF PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.430e-22
Identity = 73/222 (32.88%), Postives = 113/222 (50.90%), Query Frame = 1
Query:  184 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAXMICEKRLRRLIPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQLGNQMAWGLGALSPVL--MLIYGRFCSKEL 843
            TG+G ++P+G   +TTW   + G  GI +IT  D +         +H  G+L +              FN +  ++ K+ R + RF  YA+ AA EA+ DA+ L  ++   +R GV              A   + +K  RR+ PFF+P ++ +MA+G VS+  G +GPN A VTACATG +SIG+A +++Q G+  A   G     +  M I G   S+ L
Sbjct:   10 TGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTE------PYSVHLAGELKN--------------FNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQ-LDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRAL 210          
The following BLAST results are available for this feature:
BLAST of EY649619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
KASM_ARATH8.175e-7661.343-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
FABF_RHIME6.366e-3940.913-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhi... [more]
OXSM_MOUSE7.537e-3237.443-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
OXSM_HUMAN9.844e-3237.953-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
OXSM_BOVIN1.286e-3136.923-oxoacyl-[acyl-carrier-protein] synthase, mitocho... [more]
OXSM_SCHPO3.167e-3038.07Putative 3-oxoacyl-[acyl-carrier-protein] synthase... [more]
FABF_STAAW2.430e-2232.883-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAU2.430e-2232.883-oxoacyl-[acyl-carrier-protein] synthase 2 (Fragm... [more]
FABF_STAAS2.430e-2232.883-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]
FABF_STAAR2.430e-2232.883-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Sta... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-F04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649619 ID=EY649619; Name=EY649619; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGGTGGAAACATCGTACGAAGTTCCAAACATTCAGACAGTT
AACGATGTCAAACTCATCTTGGCGCCGGCTCTTTTTCACTCGTCGCTTTG
ATCTCTCTCGTTACTTTTCCTCTTCTTCACGCGCTGAAGTTTTCGACCCG
CCTCCACTTTCGCCTCTTCGCCGAGTCGTCGTCACCGGCATAGGAATGGT
GACGCCGCTGGGCTGCGGAGCGGAGACCACTTGGAGGCGTTTGATAGTGG
GTGAATGTGGGATACGGGAAATTACACCCGAGGACCTTAAGATGGGTAAC
TTTGATAGAGAAACTCAGTTGCATGCATTTGGTCAGTTGACTTCTAAAGT
TGCTGCTGTTGTGCCTTGTGGGATCAGTTCTGGTGAATTCAATGAGGACT
CGTGGCTTAATTCTAAAGATCACAGGTCGATAGCAAGATTTATAGCCTAT
GCGCTATGTGCAGCTGACGAGGCTCTTCATGATGCAAAATGGCTACCCAG
TGATCAGGGACAGAAGGAAAGAACGGGAGTATCTATTGGCGGGGGCATAG
GAAGCATCAGTGATACAGTGGATGCAGCGCANATGATCTGTGAAAAGCGA
CTTCGTCGGCTTATTCCATTTTTCATTCCAAGGATATTAATCAATATGGC
ATCTGGTCATGTGAGCATGAAATATGGATTCCAGGGACCAAACCATGCTG
CTGTAACTGCCTGTGCTACCGGCGCACATTCTATCGGTGATGCTGCAAGG
ATGATTCAGTTGGGAAATCAAATGGCATGGGGGCTGGGGGCACTGAGTCC
AGTATTGATGCTTATCTATGGCAGATTTTGCAGTAAAGAGCTTGGCTTCC
AAGGCATGGGCCCCCAAAAGAAACTTACGACCTTTGGAGG
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