EY702803

Overview
NameEY702803
Unique NameEY702803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 1.317e-90
Identity = 155/175 (88.57%), Postives = 169/175 (96.57%), Query Frame = 3 
Query:  255 DPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            DP+Q   +VKLFNRW+F+DVQ++D+SL DYIGV  +K+ATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAV+NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARE+AFRNIK+IAECLAD+LINAAK
Sbjct:    3 DPTQ--IEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAK 175

HSP 2 Score: 45.0542 bits (105), Expect = 1.317e-90
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDEI+RVAKANR
Sbjct:  175 KGSSNSYAIKKKDEIERVAKANR 197
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 2.923e-90
Identity = 155/185 (83.78%), Postives = 170/185 (91.89%), Query Frame = 3 
Query:  225 MATAVVTQSQDPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            MATA    ++       +VKLFNRWT++DV V DISL DYIGVQAAK+AT+VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NPIQVI+DA++NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGARE+AFRNIKTIAECLAD+LINAAK
Sbjct:    1 MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINAAK 185

HSP 2 Score: 45.0542 bits (105), Expect = 2.923e-90
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDEI+RVAKANR
Sbjct:  185 KGSSNSYAIKKKDEIERVAKANR 207
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 2.452e-89
Identity = 153/185 (82.70%), Postives = 169/185 (91.35%), Query Frame = 3 
Query:  225 MATAVVTQSQDPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            MA +    ++   Q   +VKLFNRW+F+DV V DISL DYIGVQ +K+AT+VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NPIQVI+DA++NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGARE+AFRNIKTIAECLAD+LINAAK
Sbjct:    1 MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAK 185

HSP 2 Score: 45.0542 bits (105), Expect = 2.452e-89
Identity = 21/23 (91.30%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDEI+RVAKANR
Sbjct:  185 KGSSNSYAIKKKDEIERVAKANR 207
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4)

HSP 1 Score: 273.092 bits (697), Expect = 7.803e-79
Identity = 133/168 (79.17%), Postives = 153/168 (91.07%), Query Frame = 3 
Query:  276 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            D+KLF +W+ +DVQ+NDISL DYI V+  K A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAECLAD+LINAAK
Sbjct:   16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAK 182

HSP 2 Score: 43.1282 bits (100), Expect = 7.803e-79
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDE++RVAK+NR
Sbjct:  182 KGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 7.803e-79
Identity = 133/168 (79.17%), Postives = 153/168 (91.07%), Query Frame = 3 
Query:  276 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            D+KLF +W+ +DVQ+NDISL DYI V+  K A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAECLAD+LINAAK
Sbjct:   16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAK 182

HSP 2 Score: 43.1282 bits (100), Expect = 7.803e-79
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDE++RVAK+NR
Sbjct:  182 KGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3)

HSP 1 Score: 271.166 bits (692), Expect = 2.946e-78
Identity = 132/168 (78.57%), Postives = 152/168 (90.48%), Query Frame = 3 
Query:  276 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            D+KLF +W+ +DVQ+NDISL DYI V+  K A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRNIK IAECLAD+LINAAK
Sbjct:   16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAK 182

HSP 2 Score: 43.1282 bits (100), Expect = 2.946e-78
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDE++RVAK+NR
Sbjct:  182 KGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5_NEUCR (40S ribosomal protein S5 OS=Neurospora crassa GN=rps-5 PE=3 SV=2)

HSP 1 Score: 268.855 bits (686), Expect = 1.449e-77
Identity = 128/167 (76.65%), Postives = 152/167 (91.02%), Query Frame = 3 
Query:  279 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            VKLFNRW++EDV++ DISL+DYI +   ++  Y+PH+AGRY+ KRFRKA CPI+ERLTNSLMMHGRNNGKKLMAVRIV HA EIIHL+TDQNPIQ+ VDA++N GPRED+TRIGSAG VRRQAVD+SPLRRVNQAI LLTTGARE++FRN+K+IAECLA++LINAAK
Sbjct:   28 VKLFNRWSYEDVEIRDISLTDYIQI---RSPVYLPHSAGRYAAKRFRKANCPIIERLTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQNPIQIAVDAIVNCGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAIALLTTGAREASFRNVKSIAECLAEELINAAK 191

HSP 2 Score: 43.1282 bits (100), Expect = 1.449e-77
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDE++RVAK+NR
Sbjct:  191 KGSSNSYAIKKKDELERVAKSNR 213
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3)

HSP 1 Score: 266.544 bits (680), Expect = 7.139e-77
Identity = 130/168 (77.38%), Postives = 150/168 (89.29%), Query Frame = 3 
Query:  276 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            D+KLF +W+ +DVQ+NDISL DYI V+  K A Y+PH+AGRY+   FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAECLAD+LINA K
Sbjct:   16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAANGFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARK 182

HSP 2 Score: 43.1282 bits (100), Expect = 7.139e-77
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDE++RVAK+NR
Sbjct:  182 KGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.016e-75
Identity = 134/185 (72.43%), Postives = 157/185 (84.86%), Query Frame = 3 
Query:  225 MATAVVTQSQDPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            + T VV+ ++ P     ++KLF RW+ +DV VNDISL DYI V+  K A Y+PH+AGRY+ KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+ EIIHLLT +NP+Q++V A+INSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRNIKTIAECLAD+LINAAK
Sbjct:   28 LETNVVSTTELP-----EIKLFGRWSCDDVTVNDISLQDYISVKE-KFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAK 206

HSP 2 Score: 43.1282 bits (100), Expect = 1.016e-75
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDE++RVAK+NR
Sbjct:  206 KGSSNSYAIKKKDELERVAKSNR 228
[Close]
BLAST of EY702803 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 5.464e-74
Identity = 127/174 (72.99%), Postives = 151/174 (86.78%), Query Frame = 3 
Query:  258 PSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADDLINAAK 779
            P+    +V LF +W+ + V V+DISL DYI V+  K+A Y+PH+AGR+ V+RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHA EII+LLT +NP+QV+V+AVINSGPRED+TRIG AG VRRQAVD++PLRRVNQAI+LL TGARE+AFRN+KTIAECLAD+LINAAK
Sbjct:   16 PATEAPEVALFGKWSLQSVNVSDISLVDYIPVKE-KSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAK 188

HSP 2 Score: 43.1282 bits (100), Expect = 5.464e-74
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 2 
Query:  776 QGSSNSYAIKKKDEIDRVAKANR 844
            +GSSNSYAIKKKDE++RVAK+NR
Sbjct:  188 KGSSNSYAIKKKDELERVAKSNR 210
The following BLAST results are available for this feature:
BLAST of EY702803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
RS5_CICAR1.317e-9088.5740S ribosomal protein S5 (Fragment) OS=Cicer ariet... [more]
RS52_ARATH2.923e-9083.7840S ribosomal protein S5-2 OS=Arabidopsis thaliana... [more]
RS51_ARATH2.452e-8982.7040S ribosomal protein S5-1 OS=Arabidopsis thaliana... [more]
RS5_HUMAN7.803e-7979.1740S ribosomal protein S5 OS=Homo sapiens GN=RPS5 P... [more]
RS5_BOVIN7.803e-7979.1740S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=... [more]
RS5_MOUSE2.946e-7878.5740S ribosomal protein S5 OS=Mus musculus GN=Rps5 P... [more]
RS5_NEUCR1.449e-7776.6540S ribosomal protein S5 OS=Neurospora crassa GN=r... [more]
RS5_RAT7.139e-7777.3840S ribosomal protein S5 OS=Rattus norvegicus GN=R... [more]
RS5A_DROME1.016e-7572.4340S ribosomal protein S5a OS=Drosophila melanogast... [more]
RS5_CAEEL5.464e-7472.9940S ribosomal protein S5 OS=Caenorhabditis elegans... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-D09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702803 ID=EY702803; Name=EY702803; organism=Citrus sinensis; type=EST; length=926bp
CACTACTCCCATTTGTCACTATNCCGGAATTCTTCATAGACCCACGCGTC
CGCAGAAGAGTCTCCGCGAGCGGCAGCCGATTCTTATTATTCCCTTTTCA
AACCCCTTCAGATAAACTAACGCACGCTTTCTTTTTCTTCCGCTTTCTTC
TCCATTGCTGATCATCTTGATTTCTTTTTAGTTTGAAAAACATTGTCTTT
TAATATTTTGTTGTGTTGGTAAGAATGGCGACTGCTGTAGTGACACAATC
TCAAGACCCATCACAGCCTCAATACGATGTGAAGCTCTTCAATAGGTGGA
CTTTCGAGGATGTTCAGGTCAATGACATTTCATTGAGTGATTATATTGGA
GTCCAAGCAGCAAAAAATGCAACCTATGTACCTCACACAGCTGGGAGGTA
CTCAGTGAAGCGGTTTAGGAAGGCACAGTGCCCAATTGTTGAGAGGCTCA
CAAACTCACTGATGATGCATGGAAGAAACAATGGCAAGAAATTGATGGCC
GTCAGGATTGTCAAGCACGCCATGGAAATCATTCACCTTTTGACTGACCA
GAACCCAATTCAGGTCATTGTTGATGCTGTCATCAACAGTGGTCCAAGGG
AAGACGCTACCCGCATTGGATCTGCTGGTGTTGTTAGGCGTCAGGCGGTT
GATATTTCCCCATTGCGCCGTGTGAATCAAGCAATCTATTTGCTGACCAC
TGGTGCTCGTGAATCTGCTTTCCGTAATATCAAGACTATTGCGGAATGTT
TGGCCGATGACCTCATTAATGCTGCCAAGGTTCATCTAACAGCTATGCCA
TCAAGAAGAAGGACGAGATCGACCGAGTTGCTAAGGCCAATCGCTGAACT
TTGGACAATGGTTTGGTCTTTATTATTTTTCCCCAACTCTGGACAATGTT
TTGTTTTCTATAATTTTTTCCTCAAC
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