EY649616

Overview
NameEY649616
Unique NameEY649616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M_DICDI (AP-1 complex subunit mu OS=Dictyostelium discoideum GN=apm1 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 7.310e-60
Identity = 111/210 (52.86%), Postives = 163/210 (77.62%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVTQRP---PMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            AASA+FL+D KG+VLI R+YRGDV    A +F +K +E+E    +  P++ ++G++Y++++HNN++L+A + +N NAA+ILLFL+++ +VF  YF+ELEEES+RDNFVV+YEL+DE+MDFG+PQ TE KIL E+I  + Y++E   R    P A+T AVSWR E I Y KNEVFLDV +S+N+LV+++G ++ S++  A+KMK+ LSGMP
Sbjct:    2 AASAIFLMDSKGKVLISRNYRGDVPMSVASKFISKILEEED--LNLKPIIQEDGISYIYVKHNNLFLLATTERNANAATILLFLYKMIEVFNEYFKELEEESIRDNFVVIYELMDEMMDFGYPQSTEPKILQEYITQEGYKLERGARGMVLPAAITGAVSWRKEGIKYNKNEVFLDVVESINLLVSANGTVLRSEIVGAVKMKSKLSGMP 209          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M1_SCHPO (AP-1 complex subunit mu-1 OS=Schizosaccharomyces pombe GN=apm1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.000e-59
Identity = 105/206 (50.97%), Postives = 149/206 (72.33%), Query Frame = 3
Query:  135 ASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            ASA+F+L++KG+V+I RDYR D+     E+F     E E +     P +   G+ Y++I HN+VYL+A S+ N +A  +L+FL ++ADVF  YF+EL+EES+RDNFV+VYELLDEIMDFGFPQ TE KIL E+I   +  ++    PP+A+TNA+SWRSE I Y+KNEVFLDV +SVN++  + G ++ S++   +++K YLSGMP
Sbjct:    2 ASAIFVLNLKGKVIISRDYRADIPMSVVEKFLPLKSEVEEEQGFSTPCLTHEGINYIYIHHNDVYLLALSKMNSDAMEMLVFLRKMADVFIDYFKELQEESIRDNFVLVYELLDEIMDFGFPQTTETKILQEYITQTSNTVKKHAPPPIAMTNAISWRSEGIHYRKNEVFLDVIESVNLIAAADGTVIQSEILGKVRLKCYLSGMP 207          

HSP 2 Score: 32.7278 bits (73), Expect = 5.000e-59
Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  751 PDCKLGLNDKILLEAQGRSL*GS 819
            P+ +LGLNDK+L EA GR++ G+
Sbjct:  207 PELRLGLNDKVLFEAAGRTIKGN 229          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M1_HUMAN (AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1 PE=1 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 1.056e-58
Identity = 108/208 (51.92%), Postives = 159/208 (76.44%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            +ASA+++LD+KG+VLI R+YRGDV   + E F    +EKE +    +P++   GV +M+I+HNN+YL+A S++N   + +  FL++V  VF  YF+ELEEES+RDNFV++YELLDE+MDFG+PQ T++KIL E+I  + +++E    RPP  VTNAVSWRSE I Y+KNEVFLDV +SVN+LV+++G ++ S++  ++KM+ +LSGMP
Sbjct:    2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGML-SPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMP 208          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M1_BOVIN (AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 PE=1 SV=3)

HSP 1 Score: 227.254 bits (578), Expect = 1.056e-58
Identity = 108/208 (51.92%), Postives = 159/208 (76.44%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            +ASA+++LD+KG+VLI R+YRGDV   + E F    +EKE +    +P++   GV +M+I+HNN+YL+A S++N   + +  FL++V  VF  YF+ELEEES+RDNFV++YELLDE+MDFG+PQ T++KIL E+I  + +++E    RPP  VTNAVSWRSE I Y+KNEVFLDV +SVN+LV+++G ++ S++  ++KM+ +LSGMP
Sbjct:    2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGML-SPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMP 208          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M1_RAT (AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=Ap1m1 PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 2.352e-58
Identity = 107/208 (51.44%), Postives = 159/208 (76.44%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            +ASA+++LD+KG+VLI R+YRGDV   + E F    +EKE +    +P++   GV +M+I+HNN+YL+A S++N   + +  FL++V  VF  YF+ELEEES+RDNFV++YELLDE+MDFG+PQ T++KIL E+I  + +++E    RPP  VTNAVSWRSE I Y+KNEVFLDV ++VN+LV+++G ++ S++  ++KM+ +LSGMP
Sbjct:    2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGML-SPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMP 208          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M1_MOUSE (AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1 PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 2.352e-58
Identity = 107/208 (51.44%), Postives = 159/208 (76.44%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            +ASA+++LD+KG+VLI R+YRGDV   + E F    +EKE +    +P++   GV +M+I+HNN+YL+A S++N   + +  FL++V  VF  YF+ELEEES+RDNFV++YELLDE+MDFG+PQ T++KIL E+I  + +++E    RPP  VTNAVSWRSE I Y+KNEVFLDV ++VN+LV+++G ++ S++  ++KM+ +LSGMP
Sbjct:    2 SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGML-SPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMP 208          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M_CAEEL (AP-1 complex subunit mu-1-I OS=Caenorhabditis elegans GN=unc-101 PE=2 SV=2)

HSP 1 Score: 223.016 bits (567), Expect = 1.991e-57
Identity = 106/207 (51.21%), Postives = 153/207 (73.91%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEVTQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            A SA+F+LD+KG+ +I R+YRGD+     ++F    +EKE +  S  PV+      ++FI+H N+YL++A R N N   IL FL++  +VF  YF+++EEES+RDNFVV+YELLDE+MDFGFPQ TE++IL E+I  +  ++    RPPMAVTNAVSWRSE I Y+KNEVFLDV +SVN+L +++G ++ S++  ++KM+ YL+GMP
Sbjct:    2 ATSAMFILDLKGKTIISRNYRGDIDMTAIDKFIHLLMEKE-EEGSAAPVLTYQDTNFVFIKHTNIYLVSACRSNVNVTMILSFLYKCVEVFSEYFKDVEEESVRDNFVVIYELLDEMMDFGFPQTTESRILQEYITQEGQKLISAPRPPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNMLASANGTVLQSEIVGSVKMRVYLTGMP 207          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M2_HUMAN (AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2 PE=1 SV=4)

HSP 1 Score: 213.386 bits (542), Expect = 1.007e-56
Identity = 104/208 (50.00%), Postives = 156/208 (75.00%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            +ASA+F+LD+KG+ LI R+Y+GDV+  + E F    +++E +  +  P++    V +++I+H+N+YL+A + +N NA+ +  FL++  +VF  YF+ELEEES+RDNFV+VYELLDE+MDFGFPQ T++KIL E+I   + ++E    R P  VTNAVSWRSE I YKKNEVF+DV +SVN+LVN++G ++ S++   +K+K +LSGMP
Sbjct:    2 SASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQRE-EEGALAPLLSHGQVHFLWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMP 208          

HSP 2 Score: 28.8758 bits (63), Expect = 1.007e-56
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  751 PDCKLGLNDKILLEAQGRS 807
            P+ +LGLND++L E  GRS
Sbjct:  208 PELRLGLNDRVLFELTGRS 226          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M2_MOUSE (AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2 PE=1 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 2.426e-55
Identity = 102/208 (49.04%), Postives = 153/208 (73.56%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            +ASA+F+LD+KG+ LI R+Y+GDV   + + F    +++E +     P++    V +++I+H+N+YL+A + +N NA+ +  FL++  +VF  YF+ELEEES+RDNFV+VY+LLDE+MDFGFPQ T++KIL E+I     ++E    R P  VTNAVSWRSE I YKKNEVF+DV +SVN+LVN++G ++ S++   +K+K +LSGMP
Sbjct:    2 SASAVFILDVKGKPLISRNYKGDVPMTEIDHFMPLLMQREEEGVLA-PLLSHGRVHFLWIKHSNLYLVATTLKNANASLVYSFLYKTVEVFCEYFKELEEESIRDNFVIVYDLLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMP 208          

HSP 2 Score: 28.8758 bits (63), Expect = 2.426e-55
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  751 PDCKLGLNDKILLEAQGRS 807
            P+ +LGLND++L E  GRS
Sbjct:  208 PELRLGLNDRVLFELTGRS 226          
BLAST of EY649616 vs. ExPASy Swiss-Prot
Match: AP1M2_BOVIN (AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.691e-54
Identity = 102/208 (49.04%), Postives = 157/208 (75.48%), Query Frame = 3
Query:  132 AASALFLLDIKGRVLIWRDYRGDVSAIQAERFFTKFIEKEGDPQSQNPVVFDNGVTYMFIQHNNVYLMAASRQNCNAASILLFLHRVADVFKHYFEELEEESLRDNFVVVYELLDEIMDFGFPQFTEAKILSEFIKTDAYRMEV-TQRPPMAVTNAVSWRSEWIXYKKNEVFLDVGQSVNILVNSHGQIVPSDVGWALKMKTYLSGMP 752
            +ASA+F+LD+KG+ LI R+Y+GDV+  + + F    +++E +  +  P++    V +++I+++N+YL+A + +N NA+ +  FL+++ +VF  YF+ELEEES+RDNFV+VYELLDE+MDFGFPQ T++KIL E+I     ++E    R P  VTNAVSWRSE I YKKNEVF+DV +SVN+LVN++G ++ S++  ++K+K +LSGMP
Sbjct:    2 SASAVFILDVKGKPLISRNYKGDVAMSEIDHFMPLLMQRE-EEGALTPLLSHGRVHFLWIKYSNLYLVATTLKNANASLVYSFLYKIVEVFSEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGSIKLKVFLSGMP 208          
The following BLAST results are available for this feature:
BLAST of EY649616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
AP1M_DICDI7.310e-6052.86AP-1 complex subunit mu OS=Dictyostelium discoideu... [more]
AP1M1_SCHPO5.000e-5950.97AP-1 complex subunit mu-1 OS=Schizosaccharomyces p... [more]
AP1M1_HUMAN1.056e-5851.92AP-1 complex subunit mu-1 OS=Homo sapiens GN=AP1M1... [more]
AP1M1_BOVIN1.056e-5851.92AP-1 complex subunit mu-1 OS=Bos taurus GN=AP1M1 P... [more]
AP1M1_RAT2.352e-5851.44AP-1 complex subunit mu-1 OS=Rattus norvegicus GN=... [more]
AP1M1_MOUSE2.352e-5851.44AP-1 complex subunit mu-1 OS=Mus musculus GN=Ap1m1... [more]
AP1M_CAEEL1.991e-5751.21AP-1 complex subunit mu-1-I OS=Caenorhabditis eleg... [more]
AP1M2_HUMAN1.007e-5650.00AP-1 complex subunit mu-2 OS=Homo sapiens GN=AP1M2... [more]
AP1M2_MOUSE2.426e-5549.04AP-1 complex subunit mu-2 OS=Mus musculus GN=Ap1m2... [more]
AP1M2_BOVIN2.691e-5449.04AP-1 complex subunit mu-2 OS=Bos taurus GN=AP1M2 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-F01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649616 ID=EY649616; Name=EY649616; organism=Citrus sinensis; type=EST; length=959bp
CGACCCACGCCGTCCGAAGTTTTGTTCATTCAATTTGTCATTTGTGAGAT
TCATACCTGCACTGCCGCAGCTCGGATCTGGTGCTGGTGTTATACGCCGG
TGAGGTGAGGCTCTTTCATCAGATGGCTGGCGCCGCCTCGGCGCTCTTCC
TTCTTGACATCAAAGGACGTGTCTTGATTTGGCGTGATTATCGCGGCGAT
GTCTCCGCTATTCAAGCTGAACGCTTCTTCACCAAGTTCATCGAGAAAGA
GGGGGATCCGCAATCGCAAAATCCTGTGGTATTCGACAATGGTGTGACCT
ACATGTTTATACAACACAACAATGTTTACCTGATGGCTGCTTCGAGGCAG
AACTGCAATGCTGCCAGTATTTTGTTATTTTTGCATCGCGTAGCTGATGT
GTTTAAACATTACTTTGAAGAGTTAGAAGAGGAATCTTTGCGAGATAATT
TTGTGGTTGTGTATGAGTTGCTTGATGAGATAATGGACTTCGGTTTCCCT
CAATTCACTGAGGCAAAGATTCTTAGCGAGTTTATTAAGACTGATGCTTA
TAGGATGGAAGTTACACAGCGTCCTCCCATGGCTGTGACGAATGCAGTAT
CTTGGCGCAGTGAATGGATACNGTACAAGAAAAACGAAGTTTTTCTGGAT
GTGGGCCAAAGTGTCAATATACTGGTCAACAGCCATGGGCAGATAGTCCC
GTCAGATGTTGGTTGGGCATTAAAAATGAAAACGTATTTGAGTGGAATGC
CCTGATTGTAAGCTGGGCCTAAATGATAAAATCCTACTGGAGGCCCAGGG
TCGATCCCTTTAGGGAAGCCCTTGGTCTGGACAATATAAGTTCATATAAG
TGGACGGTTGGCTCGTTTGAAATGAACGGCAAATCTTTCAACCACCGAGG
GTCCTTGGACCCGGACCTAAACCCACGCCCCAGGGAACCCTTATTGGGGG
GAAACCAAT
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