EY649615

Overview
NameEY649615
Unique NameEY649615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY649615_ssr135 microsatellite EY649615_ssr135:135..156. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY649615 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.420e-51
Identity = 111/222 (50.00%), Postives = 132/222 (59.46%), Query Frame = 2
Query:  236 TVKRIKLGSQGLEVSAQGLWCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKI--GELKKLVE---------------------------EGKIKYIGL--------------------------------------SEACAATIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYGPLRQGFLSSRPKLVESFS 700
            +V RIKLGSQGLEVSAQGL CM MS  YGPP+PE +MI LIHHA+++G+T LDTSD+YGP+TNE+L+GK   G +++ VE                           EG  K +G+                                      SEA A+TIRRAHAVHPITAVQLEWSLWSRD E +I+PTCRELGIGIVAY PL +GF SS  KLV+S S
Sbjct:    7 SVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLS 228          

HSP 2 Score: 27.335 bits (59), Expect = 3.420e-51
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  706 DFXKCMPKFQAENLEHN 756
            DF K MP+FQ ENL+ N
Sbjct:  231 DFRKHMPRFQPENLDKN 247          
BLAST of EY649615 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.115e-42
Identity = 105/229 (45.85%), Postives = 121/229 (52.84%), Query Frame = 2
Query:  239 VKRIKLGSQGLEVSAQGLWCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGK-------------------IGELKKLVEEGKIKYIG----LSEACAATIRR----------AHAV--------------------------------------HPITAVQLEWSLWS---RDVEAEIVPTCRELGIGIVAYGPLRQGFLSSRPKLVESFSH 703
            V RIKLGSQGLEVSAQGL CM MS  YGPP+PEPDMI LIHHAINSGITLLDTSD+YGP+TNEIL+GK                   +G+ KK   EGK    G    +  AC A+++R           H V                                      H +  +      WS   RDVE EI+PTCRELGIGIVAY PL +GFLSS PKL+E  S+
Sbjct:    8 VPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKK--AEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSN 234          

HSP 2 Score: 35.039 bits (79), Expect = 1.115e-42
Identity = 19/38 (50.00%), Postives = 25/38 (65.79%), Query Frame = 3
Query:  762 LFERVNEIAMRKGCTPASLHLPG-SPPSDDVVSILGTT 872
            L+ER+ E+A+RKGCTP+ L L       +DV  I GTT
Sbjct:  255 LYERICEMAVRKGCTPSQLALAWVHHQGNDVCPIPGTT 292          
BLAST of EY649615 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  335 EPDMI--ALIHHAINSGITLLDTSDIYGPYTNEILVGKI-GELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSLWSRDVEAE---IVPTCRELGIGIVAYGPLRQGFLSSRPKLVESFSH-TILXSACRSSKLKIWSIIKVI*AC**NSHEKRMHPRQLAFTWV 832
            EPD I  AL       GI  +D   ++  ++ E  + KI G LKK VE GKI+YIGLSE  A TIRRA AV+P++AVQ+E+S +S ++E     ++  CRE  I IV Y PL +GFL+   K  + F        A R  K   +  ++++      +    + P QL+  W+
Sbjct:  100 EPDYIEKALDLSLKRLGIDCIDLYYVHR-FSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDFRRKAPRYQKENFYKNLELVTKIEKIATANNITPGQLSLAWL 271          
BLAST of EY649615 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 2
Query:  452 LKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYGPLRQGFLSSRPKLVE 691
            LK  V+ GKI  +GLSE  A TI+RAHAV PI AV++E+SL+SRD+E   I+  CR+L I I+AY P  +G L+ R K VE
Sbjct:  138 LKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVE 218          
BLAST of EY649615 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.400e-13
Identity = 41/87 (47.13%), Postives = 55/87 (63.22%), Query Frame = 2
Query:  452 LKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYGPLRQGFLSSRPKLVESFSHTI 709
            LK  V+ G+I  +GLSEA A +I+RA A+ PI AV+ E+SL+SRD+E   I+ TC +L I I+AY P   G L+ R K  E     I
Sbjct:  138 LKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAEDLKDFI 224          
The following BLAST results are available for this feature:
BLAST of EY649615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
IN22_MAIZE3.420e-5150.00IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
A115_TOBAC1.115e-4245.85Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
YAKC_SCHPO2.516e-1636.99Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO1.631e-1554.32Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
PLR2_SCHPO3.400e-1347.13Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-E12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649615 ID=EY649615; Name=EY649615; organism=Citrus sinensis; type=EST; length=872bp
AAATAGCACTGTTGAGGGGGTTCCATTATTCTTCGTTCGTTGATCACTTT
TCTTATCAATGGTGGCTTTTCCATCATAGGCGGAGGGAAACACCTTAGTG
TTGCACTGTAACAGAACCAAGAAAATATACACACCACACACACACACACA
CACACAAATACATCTTTCAGTGAGTGCCTTAACATAATATAGTATCAGTA
TCAGTAACAGTAACAGTAACAAGGAAATGGCGGGGACAGTGAAGAGAATC
AAGCTAGGTTCACAAGGTCTGGAGGTTTCAGCACAAGGCTTATGGTGCAT
GGCCATGTCCTGTTTATACGGGCCACCGGAGCCCGAACCCGATATGATCG
CTTTGATCCACCATGCCATTAACAGTGGCATCACTTTACTCGACACTTCC
GATATTTACGGACCCTACACCAATGAAATCCTCGTGGGCAAAATTGGAGA
GCTCAAGAAACTAGTTGAAGAGGGTAAAATAAAGTATATAGGTCTATCTG
AGGCTTGTGCTGCAACAATTAGAAGAGCTCATGCTGTCCATCCAATAACA
GCTGTGCAGTTGGAATGGTCCTTGTGGTCACGAGATGTGGAGGCAGAGAT
AGTTCCTACTTGCAGGGAACTTGGCATTGGAATTGTTGCGTATGGTCCTC
TNAGACAAGGATTTCTATCATCACGGCCTAAGTTGGTTGAAAGCTTTTCA
CATACGATTTTAGNAAGTGCATGCCGAAGTTCCAAGCTGAAAATTTGGAG
CATAATAAAAGTTATTTGAGCGTGTTAATGAAATAGCCATGAGAAAAGGA
TGCACCCCCGCCAGCTTGCATTTACCTGGGTCACCACCAAGTGATGATGT
GGTGTCCATACTTGGGACCACC
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