EY649613

Overview
NameEY649613
Unique NameEY649613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY649613 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 44.669 bits (104), Expect = 6.924e-11
Identity = 18/22 (81.82%), Postives = 20/22 (90.91%), Query Frame = 3 
Query:  762 RPASSFNAPXLTTNSGAPVWNN 827
            RPASS+N+P  TTNSGAPVWNN
Sbjct:    7 RPASSYNSPFFTTNSGAPVWNN 28

HSP 2 Score: 43.5134 bits (101), Expect = 6.924e-11
Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = 2 
Query:  827 HSSWTIGPXVPILX*DYHLVEELANFDR 910
            +SS T+GP  PIL  DYHLVE+LANFDR
Sbjct:   29 NSSMTVGPRGPILLEDYHLVEKLANFDR 56
The following BLAST results are available for this feature:
BLAST of EY649613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CATA2_ARATH6.924e-1181.82Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-E10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649613 ID=EY649613; Name=EY649613; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGTAGAATTCTGGAGATCAGTTATAAGTTTACTCTGCAAAG
TGATTTCATTCTACTGTTCGTGAATTCACAACTCTTCCTGCTCAAAATTT
CATTTTGCCATCTATAGACAAATGTGGTTTATCAAGAGTCGTGTCTAGAC
AACAACCAAACCCTAGATATCTACGCTGAACTTTGAATGACTATAAAATT
TTCCGGACATGGATAATAGCACAAAGACCAAATTTTGCTTGATGTAGGTG
ACGTGGAAAAGGAAATCAATATAGAGAGAAGCTCCCGACACCTACCATGG
TGCCTTGAGAAGTGAAGGCTTTTGGGAATCAGTTTGGTTCTGTGTAGATG
AGTTTGCACTGATACTCAGGAAATATACGAATCAATGCTGCCAGTTTTCC
AAATACAATTCCTGTGGGTTCAGGTGTTAGCTTTAAAGAAAGTGGAGCAA
GGCAATAACGTGGTGATGAATCAGGAACTTGCTCAAATCTTCAACAATCT
TTATATTCACAAAGCAATTGTAAAATTGCTATGAATCATGAATGGATATC
AGGGAGGCTTTGTGAAACAATAACATGATCCCAAGCAACATCGATTTTTT
ACCTGTTGGATCATGCTTAGCCACTTGTTTGAAATATTTAGAAGCACTCT
CGAACTCAATAAGTATGCCTGGGAACACAAGAAATGCTCTTGCTTCAGCC
TTATCTGCAGTTCTTCCCAGATGACAACCCATTATCAAACCATGGACCGA
TGCTGGNAGTCCGCCCTGCCAGTTCTTTCAACGCCCCCTTNCTTACCACC
AATTCCGGCGCTCCGGTATGGAACAACACTCATCATGGACGATTGGACCT
ANAGTTCCAATCCTNNCTTGAGATTATCATCTAGTGGAGGAACTGGCAAA
TTTTGATAGGG
back to top