EY702799

Overview
NameEY702799
Unique NameEY702799
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702799 vs. ExPASy Swiss-Prot
Match: SYP61_ARATH (Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.941e-81
Identity = 152/210 (72.38%), Postives = 175/210 (83.33%), Query Frame = 3
Query:   48 MSSAQDPFYIVKEEIQDSIDKLQSTFHQWENSASDPGEQVHLKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQEKIIDELGTEMDSTSNRLDFVQ 677
            MSSAQDPFYIVKEEIQDSIDKLQSTFH+WE  + D G+Q H+ KEL+A C SIEWQVDEL+KAI VA++DPSWYGID+ ELEKRRRWTS ARTQV ++K  VL+G  +  G   AS +RRELMR+PNS +A        +D+D F+QSESDRQ+LL+KQQDEELDELS SVQRIGGVGLTIHDELVAQE+IIDEL TEMDST NRL+FVQ
Sbjct:    1 MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSS-GAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQ 209          
BLAST of EY702799 vs. ExPASy Swiss-Prot
Match: STX6_CHICK (Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.618e-20
Identity = 64/220 (29.09%), Postives = 112/220 (50.91%), Query Frame = 3
Query:   54 SAQDPFYIVKEEIQDSIDKLQSTFHQWENSASDPG----EQVH-LKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRRELMRLPNSHQAKSN---QYAAAQD-----NDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQEKIIDELGTEMDSTSNRLDFV 674
            S +DPF++VK E+Q +++  Q  F +W     DP     E++     EL     SIEW +++LD+ I +   +P  + +D  EL  R+ + ++ R  V  MK  + +     +    A    R+ +   +S Q+ S+   +Y+         N  FI+ +  +Q L+V+QQDE+L+ +S S+  +  +   I  EL  Q  ++D+   E+DST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSIATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELGIRKSFITSTRQVVREMKDQMSNSSMQAL----AERKNRQALLGESSSQSWSSGPDKYSRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELDSTHSRLDNV 217          
BLAST of EY702799 vs. ExPASy Swiss-Prot
Match: STX6_PONAB (Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.290e-19
Identity = 60/219 (27.40%), Postives = 106/219 (48.40%), Query Frame = 3
Query:   54 SAQDPFYIVKEEIQDSIDKLQSTFHQWENSASDPGEQVHLK-----KELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAV-------LSGGANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQEKIIDELGTEMDSTSNRLDFV 674
            S +DPF++VK E+Q +++  Q  F +W     DP      +      EL     SIEW +++LD+ I +   +P  + +D  EL  R+ + ++ R  V  MK  +       L+   N    +  SG +       + +     +   A  N  FI+ +  +Q L+V+QQDE+L+ +S S+  +  +   I  EL  Q  ++++   E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQALLGDSGSQNWSTGTTDKYGRLDRELQRA--NSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNV 218          
BLAST of EY702799 vs. ExPASy Swiss-Prot
Match: STX6_HUMAN (Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.290e-19
Identity = 60/219 (27.40%), Postives = 106/219 (48.40%), Query Frame = 3
Query:   54 SAQDPFYIVKEEIQDSIDKLQSTFHQWENSASDPGEQVHLK-----KELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAV-------LSGGANGVGTMSASGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQEKIIDELGTEMDSTSNRLDFV 674
            S +DPF++VK E+Q +++  Q  F +W     DP      +      EL     SIEW +++LD+ I +   +P  + +D  EL  R+ + ++ R  V  MK  +       L+   N    +  SG +       + +     +   A  N  FI+ +  +Q L+V+QQDE+L+ +S S+  +  +   I  EL  Q  ++++   E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQVVRDMKDQMSTSSVQALAERKNRQALLGDSGSQNWSTGTTDKYGRLDRELQRA--NSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLDNV 218          
BLAST of EY702799 vs. ExPASy Swiss-Prot
Match: STX6_RAT (Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 61/220 (27.73%), Postives = 109/220 (49.55%), Query Frame = 3
Query:   54 SAQDPFYIVKEEIQDSIDKLQSTFHQWENSASDPGEQVHLK-----KELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRRELMRLPNSHQ---AKSNQYAAAQD-----NDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQEKIIDELGTEMDSTSNRLDFV 674
            S +DPF++VK E+Q +++  Q  F +W      P      +      EL     SIEW +++LD+ I +   +P  + +D  EL  R+ + ++ R  V  MK  +    A+ V  ++    R+ L+   +S       +++Y          N  FI+ +  +Q L+V+QQDE+L+ +S S+  +  +   I  EL  Q  ++D+   E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQM---SASSVQALAERKNRQALLGDSSSQNWDAGVTDRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNV 218          
BLAST of EY702799 vs. ExPASy Swiss-Prot
Match: STX6_MOUSE (Syntaxin-6 OS=Mus musculus GN=Stx6 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 61/220 (27.73%), Postives = 109/220 (49.55%), Query Frame = 3
Query:   54 SAQDPFYIVKEEIQDSIDKLQSTFHQWENSASDPGEQVHLK-----KELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRRELMRLPNSHQ---AKSNQYAAAQD-----NDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQEKIIDELGTEMDSTSNRLDFV 674
            S +DPF++VK E+Q +++  Q  F +W      P      +      EL     SIEW +++LD+ I +   +P  + +D  EL  R+ + ++ R  V  MK  +    A+ V  ++    R+ L+   +S       +++Y          N  FI+ +  +Q L+V+QQDE+L+ +S S+  +  +   I  EL  Q  ++D+   E++ST +RLD V
Sbjct:    2 SMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQM---SASSVQALAERKNRQALLGDSSSQSWNAGVADRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNV 218          
BLAST of EY702799 vs. ExPASy Swiss-Prot
Match: STX10_HUMAN (Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.993e-16
Identity = 56/214 (26.17%), Postives = 111/214 (51.87%), Query Frame = 3
Query:   54 SAQDPFYIVKEEIQDSIDKLQSTFHQW-----ENSASDPGEQVHLKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSASGMRRELMRLPNSHQAKSN--QYAAAQDNDDFIQSESDRQLLLVKQQDEELDELSASVQRIGGVGLTIHDELVAQEKIIDELGTEMDSTSNRLDFV 674
            S +DPF++V+ E+Q +++  +  + +W     E++A    E      EL  G  SIEW +++L++ IG+   +P  + +   +L++R+ +    R  V  MK  ++S  A  V  +  +  R  L   P + ++ S+    +A      +I+ +   Q L++ +QD++L+ +S S+Q +  +   + +EL  Q  ++D    EMD T +R+D V
Sbjct:    2 SLEDPFFVVRGEVQKAVNTARGLYQRWCELLQESAAVGREELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHMVSPTA--VAFLERNN-REILAGKPAAQKSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGV 212          
The following BLAST results are available for this feature:
BLAST of EY702799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SYP61_ARATH3.941e-8172.38Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 ... [more]
STX6_CHICK6.618e-2029.09Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1[more]
STX6_PONAB4.290e-1927.40Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1[more]
STX6_HUMAN4.290e-1927.40Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1[more]
STX6_RAT7.317e-1927.73Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1[more]
STX6_MOUSE7.317e-1927.73Syntaxin-6 OS=Mus musculus GN=Stx6 PE=2 SV=1[more]
STX10_HUMAN1.993e-1626.17Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-D05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702799 ID=EY702799; Name=EY702799; organism=Citrus sinensis; type=EST; length=891bp
AGCAATCTCTTCATCGCCACCTCCTTTTCCGGACACCGGATTAAATTATG
TCTTCTGCTCAAGATCCATTCTATATCGTTAAAGAAGAGATTCAAGATTC
TATTGATAAGTTGCAATCTACTTTCCATCAATGGGAAAATAGTGCTTCTG
ATCCTGGGGAGCAAGTACATTTGAAGAAGGAACTACTCGCCGGTTGTGAG
AGCATTGAGTGGCAGGTAGATGAATTGGACAAAGCAATTGGTGTGGCAAG
CAGAGATCCTTCTTGGTATGGTATTGATGACATTGAACTTGAAAAACGAA
GGAGATGGACCAGCACTGCTCGTACTCAGGTCAGCAGCATGAAGAAAGCT
GTATTATCTGGGGGTGCGAATGGTGTTGGGACTATGAGTGCAAGTGGAAT
GCGTCGGGAATTAATGAGGCTTCCAAATTCTCATCAGGCTAAATCAAACC
AGTACGCTGCGGCCCAAGATAATGATGATTTTATCCAGTCAGAATCTGAT
AGACAATTGCTTCTTGTAAAGCAACAGGATGAGGAGTTGGATGAACTTAG
TGCAAGCGTGCAGAGAATTGGAGGTGTTGGGCTTACCATACATGATGAAC
TCGTAGCACAGGAGAAGATTATAGATGAACTTGGTACGGAAATGGACAGC
ACATCTAATCGTCTTGATTTTGTTCAGAAAAAAGTGGCTATGGTCATGAA
GAAGGCCAGCGCCAAGGGTCAAATTATGATGATATTATTTTTGATTGCTC
TGTTTATCGNTCTATTTGGTCTGGTCTTCCTTACTTANGCTGGAGACGAA
ACCAGGCTATGATGNTCATACATAGACGGGGCTTTTGGGTGTCGAAATAA
TTTCAAATGTTTGATAGGGGAGGCTACAGAACATTGATTGG
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