EY649599

Overview
NameEY649599
Unique NameEY649599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10867 contig Csv1_Contig10867:34..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY649599 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.261e-25
Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 2 
Query:  398 ITKLQLAIYNVDR--HELKPAEAQIL-PEDFSTPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQW-RTVMDLYRG*LVTETVSFGTAGA*RYRFGCGHN 856
            +TK QL    ++R    L+  EA +  P    T V +G     GEY   + +GTP + FS ++DTGSD+ W QC+PCT+C+ QS PIF+P+ SSS+S LPC++  C++L    C  N C Y +        +G + TET++FG+       FGCG N
Sbjct:   54 LTKFQLLERAIERGSRRLQRLEAMLNGPSGVETSVYAG----DGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVSIPNITFGCGEN 206
[Close]
BLAST of EY649599 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.817e-24
Identity = 58/157 (36.94%), Postives = 83/157 (52.87%), Query Frame = 2 
Query:  398 ITKLQLAIYNVDRHELKPAEAQILPEDFS---TPVVSGASQGSGEYFSRIGVGTPPRQFSMVLDTGSDINWLQCRPCTECYQQSDPIFDPKTSSSYSPLPCAAPQCKSLDVSACRANRCLYQW-RTVMDLYRG*LVTETVSFGTAGA*RYRFGCGHN 856
            +TK +L    + R E +      + +  S   TPV +G     GEY   + +GTP   FS ++DTGSD+ W QC PCT+C+ Q  PIF+P+ SSS+S LPC +  C+ L    C  N C Y +        +G + TET +F T+      FGCG +
Sbjct:   55 LTKYELIKRAIKRGERRMRSINAMLQSSSGIETPVYAG----DGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETSSVPNIAFGCGED 207
The following BLAST results are available for this feature:
BLAST of EY649599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR5.261e-2539.49Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR5.817e-2436.94Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-D07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649599 ID=EY649599; Name=EY649599; organism=Citrus sinensis; type=EST; length=894bp
CACTCTTCTTTCCATTTCTCTGCAACGCAAAAGAAAAAAAAGGAAAAAAA
TGGCTCCGATTAAGCCATTTGTTCTCTTCACAATCACAACCATCCTCTTC
TCTTTCTGTCTCTTCACCTCCGCCTCATCCCGCGGCCTATCAGAAACCGC
CACGACGGTTCTCGACGTGTCGTCCGCACTTCAGCAGACCGAACACATCC
TCTCCTTCGAGCCCGAGACGCTTGAACCATTCGCTGAGGAGTCAGAGACA
GCAGCAGAGTCTTTTCCTCTCAACTCTTCTTCTTCGTTCTCATTGCCGCT
TCACTCGCGTGAAATCCTCCATAAGACGAGACACAATGATTACAGATCAC
TTGTTTTATCTCGACTCGAGCGCGACTCAGCCCGAGTCAACACTCTTATC
ACGAAACTCCAGCTGGCTATCTACAACGTAGACAGGCACGAGCTCAAGCC
CGCCGAGGCACAGATCTTGCCGGAGGATTTCTCCACTCCGGTCGTGTCCG
GTGCCAGCCAGGGCAGCGGCGAATACTTCTCCCGAATTGGCGTCGGTACG
CCGCCGAGACAGTTCTCTATGGTGCTCGACACCGGCAGTGACATTAACTG
GCTTCAGTGCCGGCCTTGTACCGAGTGTTATCAACAATCCGATCCGATTT
TTGACCCAAAAACGTCATCGTCTTACAGTCCTCTCCCGTGTGCCGCTCCT
CAGTGTAAATCCCTCGACGTGTCCGCTTGTCGTGCGAACAGGTGCCTCTA
CCAGTGGCGTACGGTGATGGATCTATACCGTGGGTGATTGGTGACTGAAA
CGGTGTCGTTTGGAACAGCGGGAGCGTGAAGGTATCGCTTTGGGTGCGGT
CATAATATGAAGGCTCCTTGGTGGACTGCCGCTGCTGGACCTGG
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