EY702789

Overview
NameEY702789
Unique NameEY702789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.495e-26
Identity = 56/78 (71.79%), Postives = 69/78 (88.46%), Query Frame = 1
Query:   43 PRVRPRVRSHFSLSSFRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 276
            P   P  ++HFSLSSFRLT+VGRF+T++MVK LE++ LAP+GSQRV +FLE+AAEGLV GGR+EIFTPMYFFLARKP+
Sbjct:  259 PWYLPLDKNHFSLSSFRLTAVGRFITKNMVKILEYIRLAPQGSQRVSNFLEQAAEGLVDGGRREIFTPMYFFLARKPE 336          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.265e-25
Identity = 58/77 (75.32%), Postives = 65/77 (84.42%), Query Frame = 1
Query:   43 PRVRPRVRSHFSLSSFRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 273
            P   P   S FSLSSFRLT+VGR +TR MVKALE+VGLAP+GS+RV +FLEKAAEGLV GG+KEIFTPMYFFL RKP
Sbjct:  265 PWYLPLDPSRFSLSSFRLTTVGRAITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKP 341          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_YARLI (Sterol 24-C-methyltransferase OS=Yarrowia lipolytica GN=ERG6 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12
Identity = 33/62 (53.23%), Postives = 49/62 (79.03%), Query Frame = 1
Query:   91 RLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 276
            R + +GR VT +++ ALE +GLAP+GS++V + LE AA  LVAGG+K++FTPM  F++RKP+
Sbjct:  317 RTSRLGRMVTMNVIGALEKIGLAPQGSRQVTEALEDAAVNLVAGGKKKLFTPMMLFVSRKPE 378          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_KLULA (Sterol 24-C-methyltransferase OS=Kluyveromyces lactis GN=ERG6 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.398e-12
Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 1
Query:   88 FRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 276
            FR + +GR  T  MV   E +GLAPKGS  V + LE+AA GLVAGG K++FTPM  F+A+KP+
Sbjct:  307 FRTSRLGRAFTTSMVTVFEKLGLAPKGSVSVTNALEEAAVGLVAGGEKKLFTPMMLFVAKKPE 369          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_CANAL (Sterol 24-C-methyltransferase OS=Candida albicans GN=ERG6 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.357e-12
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 1
Query:   79 LSSFRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 273
            L+ FR + +GRF+T   V  +E +GLAPKGS++V   LE AA  LV GGR+++FTPM  ++ RKP
Sbjct:  307 LTVFRTSRIGRFITTESVGLMEKIGLAPKGSKQVTHALEDAAVNLVEGGRQKLFTPMMLYVVRKP 371          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_CLAL4 (Sterol 24-C-methyltransferase OS=Clavispora lusitaniae (strain ATCC 42720) GN=ERG6 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
Query:   88 FRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 273
            FR + +GR VT ++V  +E +GLAPKGS++V   LE AA  LVAGG +++FTPM  ++ARKP
Sbjct:  310 FRTSKIGRTVTTNVVGLMEKIGLAPKGSKQVTGALEDAAVNLVAGGEQKLFTPMMLYIARKP 371          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_YEAST (Sterol 24-C-methyltransferase OS=Saccharomyces cerevisiae GN=ERG6 PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 1.862e-11
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 1
Query:   88 FRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQH 279
            FR + +GR  T  MV  +E +GLAP+GS+ V   LE AA GLVAGG+ ++FTPM  F+ARKP++
Sbjct:  307 FRTSYLGRQFTTAMVTVMEKLGLAPEGSKEVTAALENAAVGLVAGGKSKLFTPMMLFVARKPEN 370          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_CANGA (Sterol 24-C-methyltransferase OS=Candida glabrata GN=ERG6 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.175e-11
Identity = 34/63 (53.97%), Postives = 44/63 (69.84%), Query Frame = 1
Query:   88 FRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKPQ 276
            FR +  GR  T  MV  +E VG+AP+GS  V   LE AA GLV GGRK++FTPM+ F+A+KP+
Sbjct:  307 FRTSYFGRKFTNCMVSIMEKVGVAPQGSVEVTAALENAAVGLVEGGRKKLFTPMFLFVAKKPE 369          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_PNECA (Sterol 24-C-methyltransferase OS=Pneumocystis carinii GN=erg6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.147e-11
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1
Query:   79 LSSFRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 273
            +S  R+T++G+++    +  +EF+GL PKGS++V D L  AA+ LV  G+KEIFTPM  ++ RKP
Sbjct:  311 ISIARMTTIGKWLISSFIGLMEFIGLLPKGSKKVNDILLVAADSLVKAGKKEIFTPMQLWVCRKP 375          
BLAST of EY702789 vs. ExPASy Swiss-Prot
Match: ERG6_DEBHA (Sterol 24-C-methyltransferase OS=Debaryomyces hansenii GN=ERG6 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1
Query:   88 FRLTSVGRFVTRHMVKALEFVGLAPKGSQRVQDFLEKAAEGLVAGGRKEIFTPMYFFLARKP 273
            FR + VGR +T   V  +E +GLAPKGS++V + LE AA  LV GGR+++FTPM  ++ RKP
Sbjct:  311 FRTSKVGRTITTEAVGLMEKLGLAPKGSKQVTNALEDAAVNLVEGGRQKLFTPMMLYVCRKP 372          
The following BLAST results are available for this feature:
BLAST of EY702789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
SMT1_ARATH3.495e-2671.79Cycloartenol-C-24-methyltransferase OS=Arabidopsis... [more]
SMT1_ORYSJ2.265e-2575.32Cycloartenol-C-24-methyltransferase 1 OS=Oryza sat... [more]
ERG6_YARLI2.872e-1253.23Sterol 24-C-methyltransferase OS=Yarrowia lipolyti... [more]
ERG6_KLULA6.398e-1255.56Sterol 24-C-methyltransferase OS=Kluyveromyces lac... [more]
ERG6_CANAL8.357e-1250.77Sterol 24-C-methyltransferase OS=Candida albicans ... [more]
ERG6_CLAL41.091e-1153.23Sterol 24-C-methyltransferase OS=Clavispora lusita... [more]
ERG6_YEAST1.862e-1153.13Sterol 24-C-methyltransferase OS=Saccharomyces cer... [more]
ERG6_CANGA3.175e-1153.97Sterol 24-C-methyltransferase OS=Candida glabrata ... [more]
ERG6_PNECA4.147e-1146.15Sterol 24-C-methyltransferase OS=Pneumocystis cari... [more]
ERG6_DEBHA9.239e-1151.61Sterol 24-C-methyltransferase OS=Debaryomyces hans... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-C07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702789 ID=EY702789; Name=EY702789; organism=Citrus sinensis; type=EST; length=560bp
CATTTGTCACCTTTGTCACTATTCCGGAATTCTTTCGTCGACCCACGCGT
CCGCCCACGCGTTCGCTCTCACTTTTCACTGAGTAGCTTCCGCCTAACAT
CAGTTGGACGTTTTGTGACTAGACATATGGTGAAAGCCCTAGAATTTGTG
GGACTAGCCCCAAAGGGAAGTCAAAGGGTTCAAGATTTTCTGGAGAAGGC
AGCAGAAGGATTGGTTGCAGGCGGGAGGAAAGAGATTTTCACGCCAATGT
ACTTCTTTTTGGCCCGCAAGCCACAACATGGCTGATCTGTAAAATGAGTA
GCTTCAGTTGCGAATCTTGGGCGGAGGACTTAGTTTCGAGCAATTTCTAT
TATCTATTTTCTTAATTTAATATGTTTATGTTTTATCACCCCTGGAGTCA
TTTTGTGCCATTTGATTTGTTTTTTGTTATTTCCTCTTTGTTTAGTTCTA
GGTCTTGACCAGTTCTGTCTTTTTCCTTCTATACCCTCTCAAACATGGAG
ACATTTGTACTTTAACAAAATATGTTGCGACCTTCTTCCGACAAAAAAAA
AAAAAAAAAA
back to top