EY702787

Overview
NameEY702787
Unique NameEY702787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY702787 vs. ExPASy Swiss-Prot
Match: EBF2_ARATH (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 2 
Query:  407 NYLNLQILSLSGCSMVSDKSLGALRKLGQTRRGLNLHHCNAISTNSVDMLVEPLWTSD 580
            N+LNLQ+LS+ GCS ++DKS   ++KLG+T  GLN+  C  IS+++VD L+E LW  D
Sbjct:  563 NHLNLQVLSIGGCSSITDKSKACIQKLGRTLLGLNIQRCGRISSSTVDTLLENLWRCD 620
[Close]
BLAST of EY702787 vs. ExPASy Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2 
Query:  392 SLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTRRGLNLHHCNAISTNSVDMLVEPLWTSDGLS 589
            +LA  + L LQILS++GCSMV+DKSL A+  LG T  GLNL  C +IS ++VD LVE L+  D LS
Sbjct:  563 ALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTVDFLVERLYKCDILS 628
The following BLAST results are available for this feature:
BLAST of EY702787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EBF2_ARATH3.420e-1151.72EIN3-binding F-box protein 2 OS=Arabidopsis thalia... [more]
EBF1_ARATH4.467e-1156.06EIN3-binding F-box protein 1 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-C05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702787 ID=EY702787; Name=EY702787; organism=Citrus sinensis; type=EST; length=912bp
CATTAGTCATCCTTTTCCCTATNCCGAGACTCTCTACCTCGACCCACGCG
TCCGGGAATATGCATCGCAAACATTTCAGCAGAACTGGATGACAACAGCA
ACAACTCGTGAACTCCTCAACCATTCACCAGAAAACAAATGCAAATGGAC
ACCCCAGCATAAGCCTAAAGAAAGTGTCAGATTCTTGATGAATTCTAATA
GAATGAAAGGGAAAATGTATTTATCAAAGCTCTACTACGCCTACTTTACA
ATTATGAACATCAACTGACTCAGATATTCTTGGGTGATCCAAATGTAACT
ATTGATTCTGGGTACAGAATGGCCTATTTTTGCTCGCTCACTGATCTCTT
ATCATGTTATACAGTGATGCGAATGTGTTTTTATATTTGCATCCCTAGCT
CATGGAAACTATCTCAATCTGCAGATTCTTTCGCTGTCAGGTTGCTCAAT
GGTTTCAGACAAGAGTTTGGGTGCCCTAAGAAAGTTGGGTCAGACGCGTC
GGGGTTTGAACCTCCACCACTGCAATGCAATCAGCACCAACTCTGTTGAC
ATGCTTGTGGAGCCACTATGGACGAGTGATGGCCTCTCATAATCTGCCAA
GCATCCGAGAAAACCCCATGCGATAACATGTATTACTGCTCCGAAGGATG
GGCCTCTAACTATCAGGGAGGCTCAGAATAATAGACCCAGCATCTATGGC
CTTCCCCAAAAATTCCGCCCCCTAATTGGGGACATGCAGCCCTCCGTATT
CAGGCCTCTAAAGCCCCGGTTCTTGTTCGAACCGCATATGGGCTCCACCT
ATTTTGCAGGGTCCCAACGCCCCCAACACTGGTTCACCCCCTTCATGCCC
CAACACGGGGGCCGCTTTTCCGCAAAGATTCCATAAGAGGGGCCCCTTGG
GGGTGCATTTAG
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