DY306876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_CITUN (V-type proton ATPase catalytic subunit A OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 9.937e-95 Identity = 174/195 (89.23%), Postives = 179/195 (91.79%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +STALE FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR Sbjct: 429 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 623 HSP 2 Score: 26.5646 bits (57), Expect = 9.937e-95 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 416 PGGDFSDPVTSATLSIVQVFW 436
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_ARATH (V-type proton ATPase catalytic subunit A OS=Arabidopsis thaliana GN=VHA-A PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 1.195e-89 Identity = 165/195 (84.62%), Postives = 174/195 (89.23%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +STALE FYE+FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+ AGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGE LV KFKKL++DL AGFRALEDETR Sbjct: 429 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERAAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEDTLVEKFKKLYDDLNAGFRALEDETR 623 HSP 2 Score: 26.5646 bits (57), Expect = 1.195e-89 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 416 PGGDFSDPVTSATLSIVQVFW 436
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_PHAAU (V-type proton ATPase catalytic subunit A OS=Phaseolus aureus PE=1 SV=3) HSP 1 Score: 323.168 bits (827), Expect = 5.887e-89 Identity = 163/195 (83.59%), Postives = 174/195 (89.23%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +STALE FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIKHR+GDLFYRLVSQKFEDPAEGE ALV +F+KLHEDL+ GFR LEDETR Sbjct: 429 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKHRVGDLFYRLVSQKFEDPAEGEAALVGQFQKLHEDLSTGFRNLEDETR 623 HSP 2 Score: 26.5646 bits (57), Expect = 5.887e-89 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 416 PGGDFSDPVTSATLSIVQVFW 436
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_BRANA (V-type proton ATPase catalytic subunit A OS=Brassica napus PE=2 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 2.901e-88 Identity = 162/195 (83.08%), Postives = 174/195 (89.23%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +STALE FYE+FD DFI+IRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+Y+LIKHRLGDLFYRLVSQKFEDPAEGE LV KFKKLH+DLT+GFR LEDETR Sbjct: 429 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYSLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRNLEDETR 623 HSP 2 Score: 26.5646 bits (57), Expect = 2.901e-88 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 416 PGGDFSDPVTSATLSIVQVFW 436
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_DAUCA (V-type proton ATPase catalytic subunit A OS=Daucus carota PE=2 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 8.400e-88 Identity = 162/195 (83.08%), Postives = 173/195 (88.72%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +STALE FYE+FD DFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAGMDGQKI+YTLIKHRLGDLFYRLVSQKFEDPAEGE LV KFKKLH+DLT+GFR LEDETR Sbjct: 429 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEKFDSDFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKISYTLIKHRLGDLFYRLVSQKFEDPAEGEDVLVGKFKKLHDDLTSGFRNLEDETR 623 HSP 2 Score: 26.5646 bits (57), Expect = 8.400e-88 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 416 PGGDFSDPVTSATLSIVQVFW 436
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_GOSHI (V-type proton ATPase catalytic subunit A OS=Gossypium hirsutum GN=CVA69.24 PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 5.398e-87 Identity = 163/195 (83.59%), Postives = 173/195 (88.72%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +S ALE FYE+FDPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNI+HF LANQAVEK AGMDGQKITY+LIKHRLGDLFYRLVSQKFEDPAEGE ALVAKFKKL+EDLTAGFRALEDETR Sbjct: 429 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEKFDPDFISIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIVHFNALANQAVEKAAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEEALVAKFKKLNEDLTAGFRALEDETR 623 HSP 2 Score: 26.5646 bits (57), Expect = 5.398e-87 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 416 PGGDFSDPVTSATLSIVQVFW 436
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_BETVU (V-type proton ATPase catalytic subunit A OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.043e-83 Identity = 158/195 (81.03%), Postives = 170/195 (87.18%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +S ALE FYE+FD +FI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITL+TAKLLREDYLAQNAFT YDKFCPFYKSVWMMRNIIHFYNLANQAVE+GAG DGQKITY+LIK RLGDLFYRLVSQKFEDPAEGE ALVAKFKKL+EDLTA FR LEDETR Sbjct: 429 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSGALESFYEKFDSEFIDIRTKAREVLQREDDLNEIVQLVGKDALAETDKITLDTAKLLREDYLAQNAFTAYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGSDGQKITYSLIKLRLGDLFYRLVSQKFEDPAEGEDALVAKFKKLNEDLTAAFRNLEDETR 623 HSP 2 Score: 26.5646 bits (57), Expect = 2.043e-83 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 416 PGGDFSDPVTSATLSIVQVFW 436
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_MAIZE (V-type proton ATPase catalytic subunit A (Fragment) OS=Zea mays PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 2.666e-83 Identity = 155/195 (79.49%), Postives = 167/195 (85.64%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +S ALE FYE+FDPDFI+IRTKAREVLQREDDLNEIVQLVGKDALAE DKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHF LANQAVE+ AG DG KITY++IKHRLGDLFYRLVSQKFEDPAEGE ALV KFKKL++DLT GFR LEDE R Sbjct: 367 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDPDFIDIRTKAREVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLANQAVERAAGTDGHKITYSVIKHRLGDLFYRLVSQKFEDPAEGEEALVGKFKKLYDDLTTGFRNLEDEAR 561 HSP 2 Score: 26.5646 bits (57), Expect = 2.666e-83 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 354 PGGDFSDPVTSATLSIVQVFW 374
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA_HORVU (V-type proton ATPase catalytic subunit A (Fragment) OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 2.235e-79 Identity = 147/195 (75.38%), Postives = 164/195 (84.10%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 LSIV+ F+G + K FP V + YS +STALE +YE+FDP FI++RTKAREVLQREDDLNEIVQLVGKDAL E DKITLETAKLLREDYLAQNAFTPYDK+CPFYKSVWMMRNIIHF LANQAVE+ A DG KITY ++K R+GDLFYRLVSQKFEDPAEGE LVAKF+KL++DLTAGFR LEDE R Sbjct: 386 LSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALEGYYEKFDPGFIDMRTKAREVLQREDDLNEIVQLVGKDALGESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVWMMRNIIHFNQLANQAVERAANADGHKITYAVVKSRMGDLFYRLVSQKFEDPAEGEDVLVAKFQKLYDDLTAGFRNLEDEAR 580 HSP 2 Score: 26.5646 bits (57), Expect = 2.235e-79 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 373 PGGDFSDPVTSATLSIVQVFW 393
BLAST of DY306876 vs. ExPASy Swiss-Prot
Match: VATA1_ACEAT (V-type proton ATPase catalytic subunit A isoform 1 OS=Acetabularia acetabulum PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 5.254e-60 Identity = 117/197 (59.39%), Postives = 147/197 (74.62%), Query Frame = -2 Query: 277 LSIVR-FFGFGLETWAEKPFPFVKLVYFYSSFSTALEFFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA--GMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDETR 858 L IV+ F+G + K FP V + YS + ALE FYE+FD DF+ +R AREVLQ+ED+LNEIVQLVGKDALAE DKI LETA+ L+EDYL QN+FT YDK+CPFYKSV MMRNI+ F+ LA QA+E+ A +DGQKIT+ +IK +LGDL Y++ SQKFEDP++GE + A +L+E+L FRALEDE R Sbjct: 417 LGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYLNALEPFYEKFDSDFVTLRQVAREVLQKEDELNEIVQLVGKDALAESDKIILETARFLKEDYLQQNSFTKYDKYCPFYKSVGMMRNIVTFHRLATQAIERTAAGNVDGQKITFNIIKAKLGDLLYKVSSQKFEDPSDGEGVVTAHLNELNEELKEKFRALEDEYR 613 HSP 2 Score: 26.5646 bits (57), Expect = 5.254e-60 Identity = 13/21 (61.90%), Postives = 13/21 (61.90%), Query Frame = -1 Query: 836 PGGGFSVPVTSAPP*HCAVFW 898 PGG FS PVTSA VFW Sbjct: 404 PGGDFSDPVTSATLGIVQVFW 424 The following BLAST results are available for this feature:
BLAST of DY306876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 143
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306876 ID=DY306876; Name=DY306876; organism=Citrus sinensis; type=EST; length=1216bpback to top |