DY306202

Overview
NameDY306202
Unique NameDY306202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1263
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY306202 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.173e-11
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 1 
Query:  337 VGIAEEGSVNMLMDRGIPMDDLKLAC*DTVLTLINDGCADGKDLVVTVMTSSRHEQMCALYDMWP 531
            + I+E+G V++L D G   DDLKL   D++LT I DG ADGKDLVV+VM++   EQ+CAL D+ P
Sbjct:   94 IDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGP 158
The following BLAST results are available for this feature:
BLAST of DY306202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IF5A2_MEDSA3.173e-1153.85Eukaryotic translation initiation factor 5A-2 OS=M... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3DH04RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306202 ID=DY306202; Name=DY306202; organism=Citrus sinensis; type=EST; length=1263bp
GGTTTATTCCACTTGAGCATCATCAAAATCATATGGCAATGACATCCGCG
CTGTGCCTACTTAAGGTGACTCGTTCGATGGAGTCAACTCGGGGAGCTAC
ACGTTACTTCCTCGACCACAAAGGCCGTGTCTTGAGCGAGGAAGAACGCG
CTGCCGAGAACGTTATATTCACAAAATGGATAGGGAAATGTTGGACACCC
AGACGGGAAAGCCTGATAATGATAAGCGGCACATTGATAGAAATGGTGCC
GACAATAGAACGAAACAGCGACATATTGGTTCACTCTTCCTTGTGCGTGT
ACGGACCCCTCGTCTGTACAAAGATAATAACTATTTGTTGGGATTGCAGA
GGAAGGATCTGTGAATATGCTGATGGACCGTGGTATTCCCATGGATGATC
TGAAGCTCGCCTGCTAGGATACTGTGCTGACCCTGATCAATGACGGTTGT
GCTGATGGGAAAGACTTGGTTGTGACCGTCATGACTTCATCGCGCCATGA
GCAGATGTGTGCCCTCTATGATATGTGGCCCATGGTCGTATTTGCGCGAT
ATGTGATTATCTTCTGTGTATGGTTGCGTCTGTTTTTAGGAAAATATTTT
AATCATCTACAGTTTGCCTTTAATATTTGTAGCGTCTTTGTTTTGTGGTG
AGAATTGCAAGCTGCCTGGAATATGTAGTTCCTTTGATTGGCGGCTAACA
AATTTATGGTGGTCAATTTCTCTAATGAATTATAACGTTAAAAACAAATC
GTCTTTGTTTATTAAAAAGACACAAACAAAAAAAACCCCAAGGGGTTCCC
CGGCCTCATTTTCCCACTAAAAGTTTCATATTACAATTTCTGGTCATTCT
TTGAAAAATCTTTGACGAGGAAACCTCTTGTTTTTCCCCAAGTCCTAAGC
TTGCGAAACCTCTTCTTATCCTAAAATGACTAAAAAAATAGAAGGCTGAT
ACACTCCGATCTTCACAAAAATTCCCACTCTTGAAGAGAGNAAATCGCAA
TATTAAGGAGGCTAAATTTCTTTTACTCAATGGGNAGATGGATCTTCGGT
NGGGACGTGCGCCGGTTATTTCTAGCATACTTAGGGTGCAACACGGCGTA
AGCCGTGACAGAAATATACCAAAGTCACAANTATAGTGGAANGCTTGGTT
TGATAAAAATAATAGATAAGCTGACTTGAAAATAAGAATAATACNATAAN
GTCTCACGAAAANAACATAACCAGTTTTTGCATACATAGNTCATCAGTCA
ATAACCTCTCAAT
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