DY306200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.435e-19 Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I A+PT++IT+ H+ S CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 208 IQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.435e-19 Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I A+PTV +T+ H+ S CPVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 210 IQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.099e-19 Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I A+PTV +T+ H+ S CPVC+D + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 213 IQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.211e-18 Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I A+PTV +T+ H+ S CPVC++ + LG RQ+PCNH++H CIVPWL QH+SCPVCR+ L Sbjct: 212 IQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: R126A_XENLA (RING finger protein 126-A OS=Xenopus laevis GN=rnf126-A PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.581e-18 Identity = 34/64 (53.12%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I A+PT++IT+ H+ S CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 209 IQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: R126B_XENLA (RING finger protein 126-B OS=Xenopus laevis GN=rnf126-B PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.698e-18 Identity = 33/64 (51.56%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I A+PT++IT+ H+ CPVC++ + +G RQ+PCNH++H+DCI+PWL QH++CPVCR+ L Sbjct: 209 IQALPTIQITEEHVGFGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.637e-15 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I ++PTV +TQ + + CPVC++ + + + RQ+PCNH +HS CIVPWL H++CPVCR+ L Sbjct: 210 ITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.637e-15 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 197 I ++PTV +TQ + CPVC++ + + E RQ+PCNH +HS CIVPWL H++CPVCR+ L Sbjct: 209 ITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.086e-14 Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 200 ++++P V +T + CPVC +FE G RQ+PC H++HS CI+PWL + NSCP+CR ELP Sbjct: 60 VESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELP 124
BLAST of DY306200 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.265e-14 Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 3 Query: 6 IDAMPTVRITQRHLRSDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 200 ++++P V +T + CPVC +FE G RQ+PC H++HS CI+PWL + NSCP+CR ELP Sbjct: 60 VESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELP 124 The following BLAST results are available for this feature:
BLAST of DY306200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306200 ID=DY306200; Name=DY306200; organism=Citrus sinensis; type=EST; length=1271bpback to top |