DY306198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: LWD1_ARATH (WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 3.208e-101 Identity = 205/343 (59.77%), Postives = 227/343 (66.18%), Query Frame = 2 Query: 2 GVSSDPNLDGLDEQQKRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWG--XXXXXXXXXXXXXXXXXXXARQGTLDDHLRELRTGHAVGSGWGGTSRTRDIXXXXXXXXXXXXFSTFPSRTPPVGELQRHQASVDPLCRGPTHFLANLPGLGNDPRALIWDFVFKGSPR*KGGLESYPGETRLGGKNGTMAGGSSSPPREGFAFA 1024 G SSDP DG DEQQKRSEIYTYE+PWHIYAMNWSVRRDKKYRLAI SLLEQYPNRVEIVQLD+S GEIR+DPNLSFEHPYPPTKTIFIPDKECQ+PDLLATSSDFLR+WRI+D+ RVELKS LN NKNSE+CGPLTSFDWNEAEPRRIGTSS DTTCTIWDIEREAVDTQLIAHDKEV+DIAWG T+ E T V GW FP+ PV ELQRHQASV+ + P H ++ G+D +ALIWD G +GGL+ T G + + SS P AF+ Sbjct: 2 GTSSDPIQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDT-PLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPAL--PVVELQRHQASVNAIAWAP-HSSCHICTAGDDSQALIWDISSMGQ-HVEGGLDPILAYT-AGAEIEQLQWSSSQPDWVAIAFS 338
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: LWD2_ARATH (WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 3.216e-93 Identity = 189/340 (55.59%), Postives = 222/340 (65.29%), Query Frame = 2 Query: 8 SSDPNLDGLDEQQKRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAW-GXXXXXXXXXXXXXXXXXXXARQGTLDDHLRELRTGHAVGSGWGGTSRTRDIXXXXXXXXXXXXFSTFPSRTPPVGELQRHQASVDPLCRGPTHFLANLPGLGNDPRALIWDFVFKGSPR*KGGLESYPGETRLGGKNGTMAGGSSSPPREGFAFA 1024 SSD +G +EQ KRSEIYTYE+PW IYAMNWS+RRDKKYRLAI SL+EQYPNRVEIVQLD+S GEIR+DPNL FEHPYPPTKT FIPDKECQ+PDLLATSSDFLR+WRISD++ RVELKS L+ +KNSE+ GP+TSFDWNEAEPRRIGTSSIDTTCTIWDIERE VDTQLIAHDKEVYDIAW G ++ + + + V W FP+ PV ELQRHQASV+ + P H +++ G+D +ALIWD G +GGL+ T G + + SS P AF+ Sbjct: 4 SSDQIQNGSEEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNLCFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPAL--PVVELQRHQASVNAIAWAP-HSSSHICSAGDDSQALIWDISSMGQ-HVEGGLDPILAYT-AGAEVEQLQWSSSQPDWVAIAFS 338
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: TTG1_ARATH (Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.007e-75 Identity = 96/178 (53.93%), Postives = 127/178 (71.35%), Query Frame = 2 Query: 35 DEQQKRSEIYTYESPWHIYAMNWS-VRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPD--KECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAWG 559 D + TY+SP+ +YAM +S +R +R+A+ S LE Y NR++I+ D + ++ PNLSFEHPYPPTK +F P + DLLA+S DFLR+W I+++ VE S+LN +K SE+C PLTSFDWN+ EP+R+GT SIDTTCTIWDIE+ V+TQLIAHDKEV+DIAWG Sbjct: 7 DSLSRSETAVTYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVKPLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG 184 HSP 2 Score: 51.9878 bits (123), Expect = 5.007e-75 Identity = 22/27 (81.48%), Postives = 26/27 (96.30%), Query Frame = 3 Query: 603 RVFDLRDKEHSTIIYESSEPDTPLVRV 683 R+FDLRDKEHSTIIYES +PDTPL+R+ Sbjct: 199 RIFDLRDKEHSTIIYESPQPDTPLLRL 225 HSP 3 Score: 49.2914 bits (116), Expect = 5.007e-75 Identity = 22/32 (68.75%), Postives = 25/32 (78.12%), Query Frame = 1 Query: 682 LGWNKQDPRYMATIIMDSAKVVVLDLSFPNPP 777 L WNKQD RYMATI+MDS KVV+LD+ P P Sbjct: 225 LAWNKQDLRYMATILMDSNKVVILDIRSPTMP 256 HSP 4 Score: 40.817 bits (94), Expect = 5.007e-75 Identity = 30/87 (34.48%), Postives = 39/87 (44.83%), Query Frame = 2 Query: 764 SRTPPVGELQRHQASVDPLCRGPTHFLANLPGLGNDPRALIWDFVFKGSPR*KGGLESYPGETRLGGKNGTMAGGSSSPPREGFAFA 1024 S T PV EL+RHQASV+ + P G G+D +ALIW+ P + Y G + + SS P G AFA Sbjct: 252 SPTMPVAELERHQASVNAIAWAPQSCKHICSG-GDDTQALIWELPTVAGPNGIDPMSVYSA----GSEINQLQWSSSQPDWIGIAFA 333
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: DCAF7_MOUSE (DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.236e-62 Identity = 102/181 (56.35%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 47 KRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREA-----------VDTQLIAHDKEVYDIAW 556 KR EIY YE+PW +YAMNWSVR DK++RLA+ S +E+Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATS D+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSIDTTCTIW +E V TQLIAHDKEVYDIA+ Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLEC--LLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAF 182 HSP 2 Score: 43.1282 bits (100), Expect = 1.236e-62 Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1 Query: 682 LGWNKQDPRYMATIIMDSAKVVVLDLSFPNPP 777 L WNKQDP Y+AT+ MD +VV+LD+ P P Sbjct: 227 LCWNKQDPNYLATMAMDGMEVVILDVRVPCTP 258 HSP 3 Score: 31.5722 bits (70), Expect = 1.236e-62 Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 603 RVFDLRDKEHSTIIYESSEPDTPLVRV 683 R+FDLR EHSTIIYE + PL+R+ Sbjct: 202 RMFDLRHLEHSTIIYEDPQ-HHPLLRL 227
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: DCAF7_HUMAN (DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.236e-62 Identity = 102/181 (56.35%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 47 KRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREA-----------VDTQLIAHDKEVYDIAW 556 KR EIY YE+PW +YAMNWSVR DK++RLA+ S +E+Y N+V++V LD+ + E +F+HPYP TK ++IPD + PDLLATS D+LRVWR+ + + R+E LLN NKNS++C PLTSFDWNE +P +GTSSIDTTCTIW +E V TQLIAHDKEVYDIA+ Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFIC--RNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLEC--LLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAF 182 HSP 2 Score: 43.1282 bits (100), Expect = 1.236e-62 Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1 Query: 682 LGWNKQDPRYMATIIMDSAKVVVLDLSFPNPP 777 L WNKQDP Y+AT+ MD +VV+LD+ P P Sbjct: 227 LCWNKQDPNYLATMAMDGMEVVILDVRVPCTP 258 HSP 3 Score: 31.5722 bits (70), Expect = 1.236e-62 Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 603 RVFDLRDKEHSTIIYESSEPDTPLVRV 683 R+FDLR EHSTIIYE + PL+R+ Sbjct: 202 RMFDLRHLEHSTIIYEDPQ-HHPLLRL 227
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: DCAF7_DICDI (DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 7.845e-62 Identity = 94/170 (55.29%), Postives = 123/170 (72.35%), Query Frame = 2 Query: 47 KRSEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAW 556 ++ IYTY SPW IY ++WS R ++ +RLAI S LE Y NRV+++QL++ T + FEHPYPPTK ++IPDK +PDLLAT+ D+LR+W + R ++LKSLL N SE+C PL+SFDWNE +P + TSSIDTTCTIW+IE TQLIAHDKEV+DIA+ Sbjct: 2 EKKRIYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVV--CGFEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLLT-NVISEFCAPLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAF 168 HSP 2 Score: 45.8246 bits (107), Expect = 7.845e-62 Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 682 LGWNKQDPRYMATIIMDSAKVVVLDLSFPNPP 777 L WNKQDP Y+ATI DS KV++LD+ P+ P Sbjct: 210 LCWNKQDPNYLATIQQDSPKVIILDIRVPSVP 241 HSP 3 Score: 31.9574 bits (71), Expect = 7.845e-62 Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = 3 Query: 603 RVFDLRDKEHSTIIYESSEPDTPLVRV 683 R+FDLR+ EHSTIIYE+ PL+R+ Sbjct: 185 RMFDLRNLEHSTIIYETPS-FVPLLRL 210
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: YBE8_SCHPO (Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe GN=SPBC17D11.08 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.862e-23 Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 2 Query: 68 YESPWHIYAMNWSVRRDKKYR---LAIASLLEQYPNRVEIVQL---DDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPD--LLATSSDFLRVWRISDE---DRRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEREAVDTQLIAHDKEVYDIAW 556 Y +PW +A++W + KY +A+ SL E+ N +++++L DD + + + YP TK ++ P D LLA++ LR+W+ E D + ++ L+ + + PLTSFDW + +P I SS+DTTCT+WDI + TQLIAHDKEVYD+A+ Sbjct: 47 YNAPWIPFALDWL--KQGKYSSEWIAMGSLNEEPNNMIQLLKLITGDDGNSHLEK-AQAATDLEYPVTKLLWNPSSVGSNTDSQLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAF 217 HSP 2 Score: 29.261 bits (64), Expect = 5.862e-23 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 603 RVFDLRDKEHSTIIYE 650 R+FDLR +HSTIIYE Sbjct: 235 RMFDLRSLDHSTIIYE 250
BLAST of DY306198 vs. ExPASy Swiss-Prot
Match: YP247_YEAST (WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae GN=YPL247C PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.765e-21 Identity = 56/183 (30.60%), Postives = 97/183 (53.01%), Query Frame = 2 Query: 53 SEIYTYESPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRADPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRISDEDRRVELK---SLLNGNK----------NSEYCG---PLTSFDWNEAEPRRIGTSSIDTTCTIWDIE-REAVDTQLIAHDKEVYDI 550 + + Y+S + ++ ++WS + + S E N+++++ +D + + + + YP +K ++P + P LAT SD LR+W +S E+R+ + + SL N+ + + G P+TSFDWN + I +SSIDTTC +WD++ V TQLIAHD EV+D+ Sbjct: 120 ASVCEYQSHYPLFGLDWSADD----YVCLGSYKEDSRNKLQVLHSNDL---LSWESVVDADVVYPVSKIQWVPSQ--LYPRKLATCSDSLRIWSVSPEERQFQEQINLSLCKYNRQHPANPAAADDMKVIGTFPPITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDV 293 HSP 2 Score: 29.261 bits (64), Expect = 7.765e-21 Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 603 RVFDLRDKEHSTIIYE 650 RVFDLR HSTIIYE Sbjct: 313 RVFDLRSLAHSTIIYE 328 HSP 3 Score: 29.261 bits (64), Expect = 7.765e-21 Identity = 11/26 (42.31%), Postives = 16/26 (61.54%), Query Frame = 1 Query: 700 DPRYMATIIMDSAKVVVLDLSFPNPP 777 DP +AT DS K+++LD+ P P Sbjct: 361 DPNVLATFAADSNKIIILDMRNPESP 386 The following BLAST results are available for this feature:
BLAST of DY306198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306198 ID=DY306198; Name=DY306198; organism=Citrus sinensis; type=EST; length=1231bpback to top |