DY306163

Overview
NameDY306163
Unique NameDY306163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1281
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306163 vs. ExPASy Swiss-Prot
Match: CPIN1_HUMAN (Anamorsin OS=Homo sapiens GN=CIAPIN1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 9.958e-15
Identity = 73/249 (29.32%), Postives = 112/249 (44.98%), Query Frame = 2
Query:  125 DTGKMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQI-ITQASSLSQLPVESFSIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS--DKGDVHKAISALEGKLLLAGFLDAQRIQLKSVVPAEVASFG--------------VKGKKPTWKIGSSFAIK-----KAPKSL--------AKLQV-------DDDSDLIDENTLLTEEDLKKPQLPLV--GDCEV*NPRKACKNC 748
            D G      +A+  DK  PV A+   +  L  +A+   + ++ +     L Q   +  S D +LS  +  S  L   ++L EI+R+L+PGG + + + + +  D     K  S L   L L+G ++ + +Q + + P EV S                + GKKP +++GSS  +K     K+  S+        AKL         DD  DLID + LL  EDLKKP    +    C     RKACKNC
Sbjct:    3 DFGISAGQFVAVVWDKSSPVEALKGLVDKL--QALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNC 249          

HSP 2 Score: 25.409 bits (54), Expect = 9.958e-15
Identity = 18/52 (34.62%), Postives = 24/52 (46.15%), Query Frame = 3
Query:  732 KPAKTAFCGKAEAEKKLKNWE*LWINLNIHRRHGGICELGECFRWR*CPSKG 887
            K  K   CG AE  +K K+ E +    +  +   G C LG+ FR   CP  G
Sbjct:  244 KACKNCTCGLAEELEKEKSREQM---SSQPKSACGNCYLGDAFRCASCPYLG 292          
BLAST of DY306163 vs. ExPASy Swiss-Prot
Match: CPIN1_BOVIN (Anamorsin OS=Bos taurus GN=CIAPIN1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.226e-14
Identity = 76/250 (30.40%), Postives = 110/250 (44.00%), Query Frame = 2
Query:  125 DTGKMQSAVLALSEDKILPVSAVLNAIRDL----GDEAVEQCDPQIITQASSLSQLPVESFSIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD--KGDVHKAISALEGKLLLAGFLDAQRIQLKSVVPAEVAS--------------FGVKGKKPTWKIGSSFAIKK--APKSLAKLQVD---------------DDS-DLIDENTLLTEEDLKKPQLPLV--GDCEV*NPRKACKNC 748
            D G      +A+  DK  PV A+ + +  L    GDE         +   + L Q   +  S D VLS  I  S  L    +L E++R+L+PGG + + + + +        K  S L   L L+G ++ + +Q +S+ P E+ S                + GKKP +++GSS  +K   A KS  K  VD               D+S DLID + LL  EDLKKP    +    C     RKACKNC
Sbjct:    3 DFGISAGQFVAVIWDKSSPVEALKDLVDKLQALTGDEGRVS-----VENINQLLQSAHKESSFDIVLSGIIPGSTTLHSADILAEMARILRPGGCLFLKEPVETAVVNNSKVKTASKLCSALTLSGLVEVKELQRESLSPEEIQSVREHLGYHSDSLLSLQITGKKPNFEVGSSSQLKLSIAKKSSGKPAVDPAAAKLWTLSANDMEDESVDLIDSDELLDAEDLKKPDPASLRAPSCGEGKKRKACKNC 247          

HSP 2 Score: 24.2534 bits (51), Expect = 6.226e-14
Identity = 17/52 (32.69%), Postives = 24/52 (46.15%), Query Frame = 3
Query:  732 KPAKTAFCGKAEAEKKLKNWE*LWINLNIHRRHGGICELGECFRWR*CPSKG 887
            K  K   CG AE  +K K+ + +    +  +   G C LG+ FR   CP  G
Sbjct:  242 KACKNCTCGLAEELEKEKSRDQI---SSQPKSACGNCYLGDAFRCASCPYLG 290          
BLAST of DY306163 vs. ExPASy Swiss-Prot
Match: CPIN1_MOUSE (Anamorsin OS=Mus musculus GN=Ciapin1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.048e-13
Identity = 67/239 (28.03%), Postives = 112/239 (46.86%), Query Frame = 2
Query:  149 VLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQ-ASSLSQLPVESFSIDTVLS--ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDK--GDVHKAISALEGKLLLAGFLDAQRIQLKSVVPAEVASFG--------------VKGKKPTWKIGSSFAIKKAPK-----------------SLAKLQVDDDS-DLIDENTLLTEEDLKKPQLPLV--GDCEV*NPRKACKNC 748
            ++A+  DK  P  A+   +  L  + +   + Q+  +  + L Q   +  S D +LS  +  S  L   ++L E++R+L+PGG + + + + + +   D  K  S L   L L+G ++ + +Q +++ P EV S                V GKKP +++GSS  +K   K                 +L+   ++DDS DLID + LL  EDLK+P    +    C     RKACKNC
Sbjct:   11 LVAVFWDKSSPEEALKKLVARL--QELTGSEGQVFMENVTQLLQSSHKESSFDVILSGVVPGSTSLHSAEVLAEMARILRPGGCLFLKEPVETAEVNNDKMKTASKLCSALTLSGLVEIKELQREALSPEEVQSVQEHLGYHSDSLRSVRVTGKKPNFEVGSSSQLKLPNKKSSSVKPVVDPAAAKLWTLSANDMEDDSVDLIDSDELLDPEDLKRPDPASLKAPSCGEGKKRKACKNC 247          

HSP 2 Score: 23.0978 bits (48), Expect = 5.048e-13
Identity = 13/34 (38.24%), Postives = 16/34 (47.06%), Query Frame = 3
Query:  834 GICELGECFRWR*CPSKGSAPIQNSPKN*PGQQI 935
            G C LG+ FR   CP  G       P   PG+Q+
Sbjct:  272 GNCYLGDAFRCANCPYLG------MPAFKPGEQV 299          
The following BLAST results are available for this feature:
BLAST of DY306163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CPIN1_HUMAN9.958e-1529.32Anamorsin OS=Homo sapiens GN=CIAPIN1 PE=1 SV=2[more]
CPIN1_BOVIN6.226e-1430.40Anamorsin OS=Bos taurus GN=CIAPIN1 PE=2 SV=1[more]
CPIN1_MOUSE5.048e-1328.03Anamorsin OS=Mus musculus GN=Ciapin1 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3DC04RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306163 ID=DY306163; Name=DY306163; organism=Citrus sinensis; type=EST; length=1281bp
GATTTGTTTTCAAATAGAAGGCATTTCTTGACGGCCTAACAGACAATATC
AAAATCCAAATCACAAAATCGAAGGTTTTAATTAGGGTTTTGACGTCTCC
TTCGTAGGCAGATCTATCTCTATGGATACCGGAAAAATGCAGAGTGCTGT
GCTCGCTCTATCAGAAGATAAAATTCTGCCTGTGAGTGCAGTTTTGAATG
CAATAAGAGATCTTGGGGATGAAGCAGTGGAACAGTGTGATCCTCAAATT
ATTACTCAAGCTTCTTCTCTAAGTCAGCTGCCAGTGGAGTCATTCTCTAT
AGATACTGTCCTCTCCATCTCGAGCTCACATGAGCTTCCTGGTGATCAGC
TGCTTGAGGAAATTTCAAGAGTTTTAAAGCCTGGTGGGACAATTCTGATT
TACAAGAAATTGACGTCTGATAAAGGGGATGTCCATAAGGCAATCTCTGC
TCTTGAGGGCAAGTTGCTGTTAGCAGGGTTTCTAGATGCACAACGTATCC
AACTAAAATCAGTTGTACCAGCTGAAGTCGCTTCATTTGGGGTAAAGGGT
AAGAAGCCTACATGGAAAATCGGGTCATCCTTTGCTATTAAGAAGGCTCC
AAAAAGCTTAGCGAAACTTCAGGTGGATGATGATTCTGATTTGATTGATG
AAAATACCCTCTTAACCGAAGAGGATTTGAAGAAACCACAGTTACCACTG
GTTGGTGATTGTGAAGTTTGAAACCCTAGGAAAGCCTGCAAAAACTGCAT
TTTGTGGGAAGGCTGAGGCAGAAAAAAAATTAAAAAATTGGGAATGACTA
TGGATCAATTTAAACATCCACCGGCGGCATGGTGGAATTTGTGAACTTGG
CGAATGTTTCCGCTGGCGTTAATGCCCTTCAAAAGGTTCTGCACCCATTC
AAAATAGCCCAAAAAATTGACCAGGGCAACAAATTCCCCCGGAACAAAAT
ATTTAAAACGTAAATTTCTGGGCCGGATAATTTTAAAAAAAAAAATCCCN
GGGGGAATTGTTTTCTGAGATTAGTATAAAAAGAACGGGCCGAGGGAAAG
GGAGGAATGGTGCACAGGTTGTGACAGAAAGAATTGGGAAGGGCAAATGA
GGGAGAAGAAGGACCCCCCCCGGCTAAAAGAGTGAGAGAGCGGACAATGT
TGATCAACCAAAAATGGTTGCATAAAAGCGATAGGTAGAGAACAAAACCA
GAGAAGGATAAAATGAGTGGCAAGAAGCGAAACCAAGGGAAGAAACACAG
AAAACAGCAACAGAACCGGTAAGAAGGCGCT
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