DY306156

Overview
NameDY306156
Unique NameDY306156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1162
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 4.488e-41
Identity = 98/161 (60.87%), Postives = 107/161 (66.46%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLEXXXXXXXXXXXXQ*ADWPIS-----VSKSPMK--EQRSPLDINPTAPPFALHRTIPR 951
            Y  TGRLT KSDVYSFGVVLLELLSGR AV K+KVG+EQSLVDWA PYL DKRKLFRIMDT+LGGQYPQK A+TAA+LALQCLN + KLRP MSEVLA  ++LE               D P       V KSP +    R  L I P A P   H   PR
Sbjct:  264 YVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLESTKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLHITPGASPLPTHNHSPR 424          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 5.677e-36
Identity = 89/158 (56.33%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLEXXXXXXXXXXXXQ*ADWPIS--VSKSPMK--EQRSPLDINPTAPPFALHRTIPR 951
            Y  TGRLT KSDVYSFGVVLLEL+SGR A+  +  G E SLVDWA PYL DKRKLFRIMDTKLGGQYPQK A TAA LALQCLN + KLRP MSEVL   E+LE            +   +  S  + KSP++    R  L + P A P   +   PR
Sbjct:  267 YVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQLESVAKPGTKHTQMESPRFHHSSVMQKSPVRYSHDRPLLHMTPGASPLPSYTQSPR 424          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.073e-26
Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLE 801
            Y  TG LTTKSDVYSFGVVLLELLSGR AV K +   E++LV+WAKPYL +KRK+FR++D +L  QY  + A   ATL+L+CL  E KLRP MSEV++  E ++
Sbjct:  251 YLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 4.509e-25
Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLE 801
            Y  TG LTTKSDVYS+GVVLLE+LSGR AV K +   EQ LV+WA+P L++KRKLFR++D +L  QY  + A   ATLAL+CL  E KLRP M+EV++  E ++
Sbjct:  252 YLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQ 355          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.894e-23
Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERL 798
            Y  TG L+ KSDVYSFGVVLLELLSGR A+ K +   E +LVDWA+PYL++KR+L R+MD +L GQY    A   A LAL C++ + K RP M+E++   E L
Sbjct:  251 YLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.666e-22
Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLE 801
            Y  TG L  +SDVYSFGVVLLELL GR A+   +   EQ+LVDWA+PYL+ +RK+  I+DT+L  QY  + A   A++A+QCL+ EPK RP M +V+    +L+
Sbjct:  245 YVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQ 348          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.501e-20
Identity = 49/104 (47.12%), Postives = 73/104 (70.19%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLE 801
            Y  +G L  +SDVYSFGV+LLE+LSG+ A+   +   E++LVDWA+PYL+ KRK+  I+D +L  QY  + A   A++A+QCL+ EPK RP M +V+   ++L+
Sbjct:  250 YMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQLQ 353          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.659e-19
Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVL 780
            Y +TG+LT KSD+YSFGVVLLEL++GR A+  TK   +Q+LV WA+P   D+R   +++D  L GQYP +  + A  ++  C+  +P +RP +S+V+
Sbjct:  278 YAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVV 374          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 9.106e-18
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 1
Query:  496 LTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERL 798
            L+G  T KSDVY+FGVV+LELL+GR  +  ++   EQSLV WA P L D   L +++D  L G YP K+    A +   C+  EP+ RPPMSEV+    RL
Sbjct:  572 LSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQLVRL 672          
BLAST of DY306156 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 9.106e-18
Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  490 YWLTGRLTTKSDVYSFGVVLLELLSGRCAVHKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPPMSEVLAIQERLE 801
            Y  TG L  KSDV++FGVVLLE+++G  A +  +   ++SLVDW +P LS+K ++ +IMD  + GQY  K A   A + L C+  +PK RP M EV+ + E ++
Sbjct:  266 YMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQ 369          
The following BLAST results are available for this feature:
BLAST of DY306156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
APK2B_ARATH4.488e-4160.87Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH5.677e-3656.33Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
APK1A_ARATH1.073e-2659.62Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
APK1B_ARATH4.509e-2557.69Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH1.894e-2354.37Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y3545_ARATH4.666e-2250.96Probable receptor-like protein kinase At3g55450 OS... [more]
BIK1_ARATH1.501e-2047.12Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
RLCK7_ARATH1.659e-1945.36Probable serine/threonine-protein kinase RLCKVII O... [more]
SRF8_ARATH9.106e-1847.52Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CX32_ARATH9.106e-1843.27Probable serine/threonine-protein kinase Cx32, chl... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM3DB07RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306156 ID=DY306156; Name=DY306156; organism=Citrus sinensis; type=EST; length=1162bp
GGTTGCTACAGGTCCGTTAAATTCCCATGTCTTTTACCTTGCTAGTTAAT
ACTTCTGAATCAAGTTTGTGAATTCTCCGTTGATGTCAATCTGCTATCAT
TAGTTCTTTGATGTTCAATGTAAATCAATCATGTTCTAGCAATCAGAAAA
TGTTTAATCTATTCTGCGTTTTCATATATTGGATTAAAATTGAACTGAGG
TGGAATCTAATGATGATGAACATTTGATTAATGAAATTTTGACCATTTGA
TTTATTATTGGGGGGGTTAAATAGAGTGAAAAATGTATGTGTAGCACATT
CATACTGGAGGATCTCATTCTTTAAATTGTTTCTAATCAGTAAGATGTCT
AATAATGTGAAGGCCGTGTACTATTGGCTTCTTCTATATACAGTGCATTT
ATTAAAAAAGAAACTAGGATTATTCCTCTTGATCGAGTAGTTTCTTTTTA
TATCTTTTGTTCTTAAAGTTAAATGTGTAATTAAGCTTTTACTGGTTAAC
AGGTCGGCTTACAACTAAAAGTGATGTCTACAGCTTCGGAGTTGTTTTGC
TTGAACTATTGTCTGGGCGATGTGCTGTACATAAAACAAAAGTTGGTATT
GAGCAGAGTCTAGTAGACTGGGCAAAACCATATTTGTCTGACAAAAGGAA
ATTATTTCGCATCATGGACACCAAGTTGGGAGGCCAGTACCCCCAGAAAG
CAGCCCATACAGCTGCTACCCTTGCCTTACAGTGCTTAAATAACGAACCT
AAACTTAGGCCTCCGATGTCTGAAGTTTTAGCAATACAAGAGCGACTTGA
ACCCCCCAAAAATTCGCCAAACTCTCCCAGTCTGAACCAATAAGCCGACT
GGCCCATTTCCGTAAGCAAGTCCCCAATGAAGGAGCAACGTTCTCCCCTG
GATATAAACCCAACTGCCCCCCCCTTTGCCCTCCACCGGACAATCCCCAG
AAAAAAAAAAAACCGAAAAACATCTTTTTTGGAATTTTTTTAAAGGCCTT
CTTGCCATTTTTCCAAAAAACATATTGAAGGGGAGGTGTCCTTCGAGAGC
GGTTTTTAAGAAAAAAAAAAAGGAAAAAATTGCCAAAAGGCCCTTTTTTT
TTTCTCTTGGAGAAAAAATTTTTTTTTTCTCGGGCGTTAAAAATGTTAAA
CCAAAAACCCCC
back to top