DY306155

Overview
NameDY306155
Unique NameDY306155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1252
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY306155 vs. ExPASy Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.015e-14
Identity = 58/148 (39.19%), Postives = 77/148 (52.03%), Query Frame = -3 
Query:  234 FFLRGRSPQDYFPDNPPDISGGRSLKPSEIQAVAAQFANSEPLRSQSPEQSVSELQTEYLSPSISEATVQLDSDGVFDGSLLDLLTASSSNNYPSEYGIFPGFDDLSN----DIFTPQL-PAVDF---ADENF-DGLLLNQDSFLWNF 650
            + LRG + +  FPDNPP ISGGR+L  SEI+  AA+FANS      S   +  E++ E  S S+             D   L +L    S N+ SE+G+FPGFDD S+    D F  QL P  D+    +E + DG +     FLWNF
Sbjct:   56 YCLRGNNAKFNFPDNPPVISGGRNLSRSEIREAAARFANS--AEDDSSGGAGYEIRQESASTSMD-----------VDSEFLSMLPTVGSGNFASEFGLFPGFDDFSDEYSGDRFREQLSPTQDYYQLGEETYADGSM-----FLWNF 185
The following BLAST results are available for this feature:
BLAST of DY306155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ERF17_ARATH3.015e-1439.19Ethylene-responsive transcription factor ERF017 OS... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3DB06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306155 ID=DY306155; Name=DY306155; organism=Citrus sinensis; type=EST; length=1252bp
AAAAATGATTTATTCATTTATTTGAAATAAAATCTAATACAATTCAATTT
TCTTCCGATCAATAAAAAAATTTACAACTTCGTAATTTTTTTTTTCCAAT
CGAATGATATGTTTACTCGTACTCGATTACTAATGAAGGATGACCGTACA
AAAAATGGTCTATCCAAACCCAAATTATCAGATACTCCGGAATCTAAAAC
TGTCCAGAGTTCTGACCTCACATTACTAATTTAAAAATTCCAAAGAAATG
AATCTTGATTTAACAATAGCCCATCAAAATTCTCGTCTGCAAAATCAACA
GCTGGGAGTTGCGGAGTAAAAATGTCATTAGACAGGTCATCAAACCCAGG
AAATATCCCATATTCGGAAGGGTAGTTATTGGAACTCGATGCCGTTAAAA
GATCCAATAAAGACCCGTCAAAAACCCCATCGCTGTCCAACTGAACCGTT
GCCTCAGAAATCGACGGCGATAAGTACTCCGTTTGCAATTCGGACACCGA
CTGTTCTGGTGATTGACTCCTCAGCGGCTCCGAATTCGCGAACTGAGCCG
CCACAGCTTGAATCTCAGATGGCTTAAGTGAGCGCCCGCCTGATATGTCG
GGGGGGTTGTCCGGGAAATAATCCTGGGGTGATCGGCCACGTAAAAAAAA
ACAAACAGGCGTCGAAGGCAGGCGCTGCTTTTTCCGGAGGGAGCGGAGGA
GACGCGCCAAAAACGGGCCACGGGCTGGGGGGATATCCGGTTTATNAACA
CAGGGATGCCCCTGTTTTNCATTGTTGGGAGACAAACTGATATGAGAGTA
CCATCTATANGAGGGACTACCAACGCGTCGCATAACCCAGTTCNGAAGCG
AACAGGTGGTGGGGGATTGGAATTAGAGGCGCGGTGAGCGGGGAAATAGA
TTGAGATTAAAACNNAGGNNGGCANAAANNAAGATNAGCANAGCGGGAGG
GGAAGGGAANCNGTAGTNNANNAANGTTNAGGAGGAGATAATATTTAGGG
CGACAGAGTGAGNCAGNGAGGAAGAAGGCTACACGATTGAAGCATTAGGT
NGACTACTAAGTTTTGGGTTGAGGGAATAAAATGGGTGAGGGNTTGTGTG
TGGAGAAAAGATGAGGGAGGGAGGGCAAGGGAAAGACAGCACGGTAGAAG
AACCAGAGAGGAGAGAGATGGAAACCAGAGAAATAATCAGTGAGGACCGG
GCAAATGCGCNGTACGGGGACAAACATGCAGAACAATAGAGTGGTGGCTG
AG
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