DY306146

Overview
NameDY306146
Unique NameDY306146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1238
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: TXND5_HUMAN (Thioredoxin domain-containing protein 5 OS=Homo sapiens GN=TXNDC5 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.178e-16
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 2
Query:  104 KSEVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKA-MXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAE 433
            K  V+ LT + F D + E  T  F+KF  PWC HCK L   WE+L K               C A + +CSK  +  YPT  +F  GK+V+++ G RD++SL  FVL +A+
Sbjct:  321 KGTVLALTENNFDDTIAEGIT--FIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQAK 429          

HSP 2 Score: 75.0998 bits (183), Expect = 9.568e-13
Identity = 38/102 (37.25%), Postives = 51/102 (50.00%), Query Frame = 2
Query:  125 TPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXX--CGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLE 424
            T D FT  ++    A FV F  PWC HC+ L   W DLG                 C A   +CS   +  YPT K+F  G+E  KYQGPRD ++L+ ++L+
Sbjct:   67 TADMFTHGIQS--AAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQ 166          

HSP 3 Score: 75.0998 bits (183), Expect = 9.568e-13
Identity = 35/93 (37.63%), Postives = 47/93 (50.54%), Query Frame = 2
Query:  173 FVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAATKA 451
            F+KF  PWC HCK L   WE L   +            C     LCS   +  YPT   F DGK+V +Y+G RD+ESL+ +V  + ++  T A
Sbjct:  209 FIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLESLREYVESQLQRTETGA 301          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: TXND5_MOUSE (Thioredoxin domain-containing protein 5 OS=Mus musculus GN=Txndc5 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 4.150e-16
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 2
Query:  104 KSEVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKA-MXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAE 433
            K  V+ LT  +F D + +  T  FVKF  PWC HCKNL   WE+L K               C A + +CSK  +  YPT  +F  G++V ++ G RD++SL +FVL +A+
Sbjct:  306 KGTVLALTEKSFEDTIAQGIT--FVKFYAPWCGHCKNLAPTWEELSKKEFPGLSDVTIAEVDCTAERNVCSKYSVRGYPTLLLFRGGEKVGEHNGGRDLDSLHSFVLRQAK 414          

HSP 2 Score: 75.8702 bits (185), Expect = 5.609e-13
Identity = 39/102 (38.24%), Postives = 50/102 (49.02%), Query Frame = 2
Query:  125 TPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXX--CGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLE 424
            T D FT  ++    A FV F  PWC HC+ L   W DLG                 C A   +CS   +  YPT K F  G+E  KYQGPRD E+L+ ++L+
Sbjct:   53 TADMFTHGIQS--AAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTADSDVCSAQGVRGYPTLKFFKPGQEAVKYQGPRDFETLENWMLQ 152          

HSP 3 Score: 72.7886 bits (177), Expect = 4.749e-12
Identity = 32/87 (36.78%), Postives = 45/87 (51.72%), Query Frame = 2
Query:  173 FVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAE 433
            F+KF  PWC HCK L   WE L   +            C     +CS+  +  YPT   F DGK+V +Y+G RD+ESL+ +V  + +
Sbjct:  195 FIKFFAPWCGHCKALAPTWEQLALGLEHSETVKIGKVDCTQHYAVCSEHQVRGYPTLLWFRDGKKVDQYKGKRDLESLRDYVQSQLQ 281          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.632e-12
Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 2
Query:  110 EVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGK-EVAKYQGPRDVESLKTFVLEE 427
            +V+ LT D+F  +V  KD    V+F  PWC HCK L   +E LG +             C   K++C+K  +  YPT + F  G  E  KY+GPR+ E+L  +V +E
Sbjct:   24 DVVVLTDDSFEKEVG-KDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKE 129          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.784e-12
Identity = 38/120 (31.67%), Postives = 60/120 (50.00%), Query Frame = 2
Query:   89 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 442
            A++ S S+V+ LT + F  +V +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ALLASASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: ERP38_NEUCR (Protein disulfide-isomerase erp38 OS=Neurospora crassa GN=erp38 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.784e-12
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 2
Query:   89 AMIHSKSEVITLTPDTFTDKVKEKDTAWFVKFCVPWCKHCKNLGSLWEDLGKAM-XXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGK--EVAKYQGPRDVESLKTFVLEEAEKAATKAQLGG 463
            A + +KS V+ L P  F D V +      V+F  PWC HCKNL  ++E+L  A+               A + L  +  +  +PT K F+DGK  +   Y+G RD++SL  F+   AEK   KA+  G
Sbjct:   14 AAVAAKSAVLDLIPSNFDDVVLKSGKPTLVEFFAPWCGHCKNLAPVYEELATALEYAKDKVQIAKVDADAERALGKRFGVQGFPTLK-FFDGKSEQPVDYKGGRDLDSLSNFI---AEKTGVKARKKG 137          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 4.749e-12
Identity = 38/120 (31.67%), Postives = 59/120 (49.17%), Query Frame = 2
Query:   89 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 442
            A + + S+V+ LT D F  +V +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.202e-12
Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 2
Query:   89 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 442
            A + + S+V+ LT D F  ++ +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 6.202e-12
Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 2
Query:   89 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 442
            A + + S+V+ LT D F  ++ +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: PDIA3_MOUSE (Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.382e-11
Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 2
Query:   89 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 442
            A + + S+V+ LT + F  +V +  +A    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPAS 136          
BLAST of DY306146 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.078e-11
Identity = 36/120 (30.00%), Postives = 59/120 (49.17%), Query Frame = 2
Query:   89 AMIHSKSEVITLTPDTFTDKVKEKDTA--WFVKFCVPWCKHCKNLGSLWEDLGKAMXXXXXXXXXXXXCGASKTLCSKVDIHSYPTFKVFYDGKEVAKYQGPRDVESLKTFVLEEAEKAA 442
            A + + S+V+ LT D F  ++ +  ++    V+F  PWC HCK L   +E    A             C A+   C+K  +  YPT K+F DG+E   Y GPR  + + + + ++A  A+
Sbjct:   19 ARLAAASDVLELTDDNFESRITDTGSSGLMLVEFFAPWCGHCKKLAPEYE--AAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEESGAYDGPRTADGIVSHLKKQAGPAS 136          
The following BLAST results are available for this feature:
BLAST of DY306146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
TXND5_HUMAN3.178e-1638.74Thioredoxin domain-containing protein 5 OS=Homo sa... [more]
TXND5_MOUSE4.150e-1638.74Thioredoxin domain-containing protein 5 OS=Mus mus... [more]
PDIA6_ARATH1.632e-1236.45Probable protein disulfide-isomerase A6 OS=Arabido... [more]
PDIA3_RAT2.784e-1231.67Protein disulfide-isomerase A3 OS=Rattus norvegicu... [more]
ERP38_NEUCR2.784e-1234.38Protein disulfide-isomerase erp38 OS=Neurospora cr... [more]
PDIA3_CERAE4.749e-1231.67Protein disulfide-isomerase A3 OS=Cercopithecus ae... [more]
PDIA3_PONAB6.202e-1230.83Protein disulfide-isomerase A3 OS=Pongo abelii GN=... [more]
PDIA3_HUMAN6.202e-1230.83Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
PDIA3_MOUSE1.382e-1130.83Protein disulfide-isomerase A3 OS=Mus musculus GN=... [more]
PDIA3_BOVIN3.078e-1130.00Protein disulfide-isomerase A3 OS=Bos taurus GN=PD... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3DA06RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306146 ID=DY306146; Name=DY306146; organism=Citrus sinensis; type=EST; length=1238bp
AGAGCCATCATAAGCTATGAGAAACCACAGCAACTCGTCCTTTGCTCTCA
ATCTGACATCACTTGTTCTTCTTCTTTCGCTTAGCCTGGCAATGATTCAT
TCAAAGTCCGAAGTCATAACGTTAACTCCCGACACATTCACTGACAAGGT
GAAGGAAAAAGACACCGCATGGTTTGTGAAATTTTGTGTGCCTTGGTGTA
AGCATTGTAAGAACTTGGGGTCGTTATGGGAGGATCTGGGAAAGGCAATG
GAAGGGGATGATGAAATAGAGGTCGGAGAAGTTGACTGCGGTGCAAGCAA
GACTTTATGCTCTAAAGTTGATATCCATTCCTATCCTACATTTAAGGTCT
TTTACGATGGAAAAGAAGTTGCAAAATATCAAGGGCCAAGGGATGTTGAA
TCGCTTAAAACATTTGTTTTGGAAGAGGCAGAAAAAGCAGCAACAAAAGC
ACAGCTTGGTGGTGACAAGGAATTGTGACAAGTTGTGGTACTTGCCAGCA
AAACCAGGATGGCCAATTCCCATCAGAATGCAATGGTTCTATTCTCACAC
TTTCAGCTGCATCCTGATCTCGAGGGGGCCATAGGAGGGTTCATCCATCA
TGTTTTGGTTTATAACCACGGCTTGTGCGGAGTTGGTTAAATATAGCGAA
GTGTTCAGCCGTCCGGTATTAAATAGGCATAACAGGGATGTGGGATTGAA
AAGCGGCCCAGTTTCTTTCGCAGAGGGAGGAATATTCTCCGATTAATCAG
TTGGTCTTTAGAAATAGTGAAAACTCATGTAAGGCACCAGGAGACAGTTA
TAACGGGATCGCACGACTGGAAACCGAAGGTCGGGTGGGAACGAAGGAGA
TTGGATAAGTTGCAGGAGTGGAGAGTGGGGACAGCGAGTGTAGGGCCGAA
GAATGAGTAAGTGAAAAGAAGTCGAATGAGATGAGCGGAGTTTAGGTTGA
GTAGGTGTAGATGCTGTATAAGTAGTCTTCGATAGCAGATCGTGCTGTAT
CTGCTGTTGTTCTCATCTCCTTAGAGTATGGTAACTTCTATGGTTGCGAC
AAAGAAGAGTGGTTGCATGTGTTGAGTAAGAATGTTGAACGGCGGGAGGG
GTTGATCAGTGGTGTACGTTAGAAATACACTACAGAAGTGAGTGAGTATC
AGGATACATCAACACGTGAAAGAGGATCCATGAAAAATAGCAGTTAATCG
GAGTAAGAATTAATTAAAATATACACTCTAAGCTATCT
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