EY702764

Overview
NameEY702764
Unique NameEY702764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.536e-47
Identity = 91/112 (81.25%), Postives = 102/112 (91.07%), Query Frame = 2
Query:  200 AAEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKHV 535
            AAEEGQVIGCHTVEAWN+QL K N+TK L+VVDFTASWCGPCRFIAPFLA+LA+KLPNV FLKVDVDELK+VA +WAVE+MPTF+ LKEGKI+ KVVGA K  LQQTIAKH+
Sbjct:    2 AAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHM 113          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.784e-46
Identity = 88/112 (78.57%), Postives = 99/112 (88.39%), Query Frame = 2
Query:  200 AAEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKHV 535
            A+EEGQVI CHTVE WN+QL K+NE+K LVVVDFTASWCGPCRFIAPF A LA+KLPNVLFLKVD DELKSVA+DWA++AMPTF+ LKEGKI+ KVVGA K  LQ TIAKH+
Sbjct:    2 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHL 113          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.296e-43
Identity = 85/111 (76.58%), Postives = 96/111 (86.49%), Query Frame = 2
Query:  203 AEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKHV 535
            AEEGQVIG HTV+AWN+ L K  + K+L+VVDFTASWCGPC+FIA F A+LA+K+P V FLKVDVDELKSVATDWAVEAMPTF+ LKEGKIV KVVGA K  LQQTIAKH+
Sbjct:    2 AEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHI 112          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.292e-40
Identity = 76/114 (66.67%), Postives = 94/114 (82.46%), Query Frame = 2
Query:  191 EMAAAEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKH 532
            +  ++EEGQV GCH VE WN+   K  ETK+LVVVDFTASWCGPCRFIAP LA +A+K+P+V+FLKVDVDELK+V+ +W+VEAMPTF+ +K+GK V +VVGA K  LQQTI KH
Sbjct:    5 DATSSEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKH 118          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.154e-33
Identity = 62/110 (56.36%), Postives = 88/110 (80.00%), Query Frame = 2
Query:  203 AEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKH 532
            A EG+VI CHT+E WN+++  +NE+K+L+V+DFTASWC PCRFIAP  A++A+K  NV+F K+DVDEL++VA ++ VEAMPTF+ +KEG I+ +VVGA K  + + + KH
Sbjct:    2 AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 5.304e-32
Identity = 66/112 (58.93%), Postives = 86/112 (76.79%), Query Frame = 2
Query:  200 AAEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARK-LPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKH 532
            AAEEGQVIGCH ++ W  QL  + ++ +L+V+DFTASWC PCR IAP  A LA+K + + +F KVDVDEL++VA ++ VEAMPTF+L+K+G +V KVVGA K  L  TIAKH
Sbjct:    2 AAEEGQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKH 113          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.928e-32
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 2
Query:  200 AAEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKHV 535
            AAEEG VI CH  + ++ Q+ K+ E  ++V++DFTASWCGPCRFIAP  A+ A+K P  +FLKVDVDELK VA  + VEAMPTFL +K+G    KVVGA K  LQ TI KHV
Sbjct:    2 AAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHV 113          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.928e-32
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 2
Query:  200 AAEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKHV 535
            AAEEG VI CH  + ++ Q+ K+ E  ++V++DFTASWCGPCRFIAP  A+ A+K P  +FLKVDVDELK VA  + VEAMPTFL +K+G    KVVGA K  LQ TI KHV
Sbjct:    2 AAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHV 113          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 6.928e-32
Identity = 62/110 (56.36%), Postives = 86/110 (78.18%), Query Frame = 2
Query:  203 AEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARKLPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKH 532
            AEE QVI CHTV+ WN++  K+ ++ +L+V+DFTASWCGPCR I P++++LA+K P+V F KVDVD+LK VA ++ VEAMP+F++LKEG+ V ++VGA K  L   IA H
Sbjct:    2 AEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVH 111          
BLAST of EY702764 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.016e-31
Identity = 66/112 (58.93%), Postives = 84/112 (75.00%), Query Frame = 2
Query:  200 AAEEGQVIGCHTVEAWNQQLHKSNETKQLVVVDFTASWCGPCRFIAPFLAQLARK-LPNVLFLKVDVDELKSVATDWAVEAMPTFLLLKEGKIVGKVVGAFKY*LQQTIAKH 532
            AAEEGQVIGCHT + W  QL K+ E+ +L+V+DFTASWC PCR IAP    LA+K + + +F KVDVDEL+SVA ++ VEAMPTF+ +K G++V K+VGA K  LQ  I KH
Sbjct:    2 AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKH 113          
The following BLAST results are available for this feature:
BLAST of EY702764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
TRXH_RICCO1.536e-4781.25Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
TRXH1_ARATH3.784e-4678.57Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TR... [more]
TRXH2_TOBAC2.296e-4376.58Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=... [more]
TRXH1_TOBAC5.292e-4066.67Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=... [more]
TRXH5_ARATH2.154e-3356.36Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TR... [more]
TRXH2_BRANA5.304e-3258.93Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE... [more]
TRXH_ORYSJ6.928e-3259.82Thioredoxin H-type OS=Oryza sativa subsp. japonica... [more]
TRXH_ORYSI6.928e-3259.82Thioredoxin H-type OS=Oryza sativa subsp. indica G... [more]
TRXH_FAGES6.928e-3256.36Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV... [more]
TRXH4_ARATH2.016e-3158.93Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TR... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-012-A01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702764 ID=EY702764; Name=EY702764; organism=Citrus sinensis; type=EST; length=1005bp
AAGAATGAAAAATAAAAAAACTAGTAANNNNNNNNNNNNCCACCNNNNNC
CCATGAGTCATCTCTTTTCACTGTTCCGGAATTCTCTTTCCCGACCCACG
CGTCCGGCAAATCACCTTTACCAAGAAAGCGAGGGAGAGAATAGAAGTAT
CGTTGGGTGGAGTAGTGGTGGTAATAACCGCCGGAAAGCAGAAATGGCAG
CAGCAGAAGAGGGACAAGTCATCGGGTGCCACACCGTTGAGGCCTGGAAC
CAGCAGCTCCACAAGAGCAATGAAACCAAACAGCTGGTTGTTGTTGATTT
CACTGCTTCATGGTGCGGACCATGCCGTTTCATTGCTCCTTTCTTGGCAC
AGCTGGCCAGGAAACTGCCTAATGTCCTGTTTCTGAAGGTTGATGTCGAT
GAACTGAAGAGTGTTGCCACTGACTGGGCAGTGGAAGCCATGCCAACTTT
CTTGTTACTGAAAGAGGGGAAGATTGTTGGCAAGGTGGTTGGAGCATTCA
AATATTAACTGCAGCAGACTATTGCCAAGCATGTGGCAATTGCTTCCTCC
TAATAAGCTATACTATCCTCCTCCCTTTTGGGTTTAAACGCTCCCGACCT
CAACATATGCTCATCCGTCCTGGTGTTCACTTATTACACTTGTTATGCGA
ATTCCGTATCCCTTGGTGTTTGGGCGGTCCGTAGTTATGGAGGGGTGGGC
CCCATCTGGGGTCTTTCACTATTTTAATATATTGTTGTCTATTACATTAA
TCTCCTATAGAACAGCGCTTCTTTTTTTCCTCGGACCAACACCCGCAATC
GCCCACACTCCCTCAACCTTTTCTCCCCCTTTTCTTATCCTTTACATGTG
GTCGGCGGTTGTCTTTTTCTCGCCTATCGTTTGTGGGTGTTTGAAATCCA
CATACATTACTAAAGGAATCTTTAACTCCAATTCTTTCCATATAATACAT
CTATTATAAATATGACACAACTGAGTACAATAAACATCCTAACCTGTGAC
TCCCT
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