DY306134

Overview
NameDY306134
Unique NameDY306134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1237
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_RAT (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Rattus norvegicus GN=Coq9 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 5.214e-35
Identity = 83/222 (37.39%), Postives = 121/222 (54.50%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIPSQR------ISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAGNGEFLGRGLVNK--LFKKMTG 936
            Q R+L A+L  V  HGW   A+  GA+ +GLS +    F    + L+  F+  C  RL   ++  + L  L  +++      +   V  RL M  PYI  WP+ALSI   P N+P S      +VD++WH  GD+++D +WY +R VL GIY+TTE+ M+ DSSPDF DT RFLD+R+ DA ++  T ++            GE L +GL+      K +TG
Sbjct:   94 QHRILTAALEFVPDHGWTAEAIAEGAQSLGLSSAAASMFGSDGSELILHFVTQCNARLNHVLEEEQKLVQLGQAEKRKTDQFLRDAVETRLRMLIPYIEHWPRALSILLLPQNIPPSLSLLTSMVDDMWHYAGDQSTDFNWYTRRAVLAGIYNTTELVMMQDSSPDFEDTWRFLDNRINDAMNMGHTAKQV--------KSTGEALVQGLMGAAVTLKNLTG 307          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_XENTR (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Xenopus tropicalis GN=coq9 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.162e-34
Identity = 75/201 (37.31%), Postives = 115/201 (57.21%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIPSQR------ISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAG 879
            Q R+L A+L+ V   GW   A+  GA+ + +S +  G F    + LV  F+  C  +L + ++  + L  L  S++      +   V  RL M  PYI +WPQAL +   P N+P+S K    +VD+IWH  GD+++D+ WY +R VL GIY+TTE+ ML DSSPDF DT +FL++R+ +A  +  + ++     E V  G
Sbjct:   99 QQRILSAALQFVPDFGWSADAIAEGAKSLDMSAAAAGMFEDGGSELVLHFVTQCNSQLTELLEEEQKLVQLGTSEKKPTTQFLRDAVEARLRMHIPYIEQWPQALGMLLLPRNIPSSLKLLTAMVDDIWHYAGDQSTDVSWYTRRAVLTGIYNTTELVMLQDSSPDFEDTWKFLENRISEAMTMGTSVKQVASTGEAVIQG 299          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_MOUSE (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Mus musculus GN=Coq9 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.517e-34
Identity = 82/222 (36.94%), Postives = 121/222 (54.50%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIPSQR------ISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAGNGEFLGRGLVNK--LFKKMTG 936
            Q R+L A+L  V  HGW   A+  GA+ +GLS +    F    + L+  F+  C  RL   ++  + L  L  +++      +   V  RL M  PYI  WP+ALSI   P N+P S      +VD++WH  GD+++D +WY +R VL GIY+TTE+ M+ DSSPDF DT RFL++R+ DA ++  T ++            GE L +GL+      K +TG
Sbjct:   95 QHRILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGSDGSELILHFVTQCNARLNQVLEEEQKLVQLGQAEKRKTDQFLRDAVETRLRMLIPYIEHWPRALSILLLPHNIPPSLNLLTSMVDDMWHYAGDQSTDFNWYTRRAVLAGIYNTTELVMMQDSSPDFEDTWRFLENRINDAMNMGHTAKQV--------KSTGEALVQGLMGAAVTLKNLTG 308          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_HUMAN (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Homo sapiens GN=COQ9 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.379e-34
Identity = 81/222 (36.49%), Postives = 122/222 (54.95%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIPSQR------ISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAGNGEFLGRGLVNK--LFKKMTG 936
            Q R+L A+L  V  HGW   A+  GA+ +GLS +    F +  + L+  F+  C  RL   ++  + L  L  +++      +   V  RL M  PYI  WP+ALSI   P N+P+S      +VD++WH  GD+++D +WY +R +L  IY+TTE+ M+ DSSPDF DT RFL++RV DA ++  T ++            GE L +GL+      K +TG
Sbjct:  100 QHRILTAALEFVPAHGWTAEAIAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEEEQKLVQLGQAEKRKTDQFLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNWYTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQV--------KSTGEALVQGLMGAAVTLKNLTG 313          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_BOVIN (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Bos taurus GN=COQ9 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.765e-34
Identity = 81/222 (36.49%), Postives = 120/222 (54.05%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIPSQR------ISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAGNGEFLGRGLVNK--LFKKMTG 936
            Q R+L A+L  V  HGW   A+  GA+ +GLS +    F    + L+  F+  C  RL   ++  + L  L  +++      +   V  RL M  PYI  WP+A SI   P N+P S      +VD++WH  GD+++D +WY +R VL GIY+TTE+ M+ DSSPDF DT RFL++R+ DA ++  T ++            GE L +GL+      K +TG
Sbjct:  101 QHRILTAALEFVPTHGWTAEAIAEGAQSLGLSSAAASMFGDDGSELILHFVTQCNARLTHVLEEEQKLVQLGQAEKKKTDKFLRDAVETRLRMLIPYIQHWPRAFSILMLPHNIPPSLNLLTSMVDDMWHYAGDQSTDFNWYTRRAVLAGIYNTTELVMMQDSSPDFEDTWRFLENRISDAMNMGHTAKQV--------KSTGEALVQGLMGAAVTLKNLTG 314          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9A_XENLA (Ubiquinone biosynthesis protein COQ9-A, mitochondrial OS=Xenopus laevis GN=coq9-A PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.284e-33
Identity = 73/201 (36.32%), Postives = 114/201 (56.72%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIPSQR------ISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAG 879
            Q ++L A+L+ V   GW   A+  GA+ + +S +  G F    + L+  F+  C  +L + ++  + L  L  S++      +   V  RL M  PYI  WPQAL +   P N+P+S K    +VD+IWH  GD+++D+ WY +R VL GIY+TTE+ ML DSSPDF DT +FL++R+ +A  +  + ++     E V  G
Sbjct:   99 QQQILSAALQFVPDFGWSADAIAEGAKSLDMSAAAAGMFEDGGSELILHFVTQCNLQLTELLEKEQKLVQLGTSEKKPTAQFLRDAVEARLRMHIPYIEHWPQALGMLLLPRNIPSSLKLLTAMVDDIWHYAGDQSTDVSWYTRRAVLTGIYNTTELVMLQDSSPDFEDTWKFLENRISEAMTMGDSVKQVASTGEAVIQG 299          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9B_XENLA (Ubiquinone biosynthesis protein COQ9-B, mitochondrial OS=Xenopus laevis GN=coq9-B PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.861e-33
Identity = 73/201 (36.32%), Postives = 115/201 (57.21%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIPSQR------ISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAG 879
            Q R+L A+L+ V   GW   A+  GA+ + +S +  G F    + LV  F+  C  +L + ++    L  L  S++      +   V+ RL M  PYI +WPQAL +   P N+P+S K  + +VD++WH  GD+++D+ WY  R VL GIY++TE+ ML DSSPDF DT +FL++R+ +A  +  + ++     E V  G
Sbjct:   75 QQRILTAALQFVPDFGWSADAIAEGAKSLDMSAAAGGMFEDGGSELVLHFVTQCNLQLTELLEKEHKLVQLGTSEKKPTAQFLRDAVKARLRMHIPYIEQWPQALGMLLLPRNIPSSLKLLSAMVDDMWHYAGDQSTDVSWYTSRAVLTGIYNSTELVMLQDSSPDFEDTWKFLENRISEAMTMGNSMKQVASTGEAVIQG 275          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_DROME (Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Drosophila melanogaster GN=Coq9 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.062e-28
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 1
Query:  295 QARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRI----DSG-EDLKDLIPSQRISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAET 867
            +A++L+A+L+HV + GW   A+I GA + G    + G FP    ALV  F   C  +L++ +    D G ++++D  P   + + VR RLEM  PY + WPQA+++ AQP + PT+  Q   LVD+I +  GD + D  WY +R  L  I   TE+Y L D SP    T  FL  R+ +A  L+    +   +  T
Sbjct:  110 RAKILDAALQHVPQQGWTRQAIILGAEESGYPSVVHGMFPEGGFALVSHFNGKCNAQLVESLQQKTDGGKQEVED--PLDFLVQAVRQRLEMVTPYKTHWPQAMALLAQPQHAPTALAQVLTLVDDICYYSGDRSVDFGWYTRRVGLATIMKMTELYFLQDKSPGHAQTWEFLKSRMDEAVQLQMMLSQTEGMTHT 303          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_DICDI (Probable ubiquinone biosynthesis protein coq9, mitochondrial OS=Dictyostelium discoideum GN=coq9 PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.796e-27
Identity = 70/204 (34.31%), Postives = 111/204 (54.41%), Query Frame = 1
Query:  301 RVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDA-ALVEFFMDDCLQRLIDRIDSGED-----LKDLIPSQRISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDAFDLKKTFQEATYLAETVGAGNGEFL 894
            ++LE SL++V  +GW   A+     ++G  P   G      A  L  +F+  C   L+ ++   E+     L  L   +++   +++RL M  P+I +W +A+ + A P N+  S      LVD IW+ VGD++SD DWY KR +L  +Y++ E++ML+D+S D  +T RF+DDRV    DL KT +    + ETVG     FL
Sbjct:  102 KILENSLKYVNSYGWTSEAVSKACIEMGYPPITQGILGEDSAYELALYFVTKCNTDLMIKLSDAENSEQQLLSGLSKKEKVKLALKLRLSMIKPFIGRWSEAMQLLANPKNIVNSSPSMLTLVDNIWYLVGDKSSDFDWYAKRGLLIALYTSAELFMLSDTSVDHSNTWRFVDDRVD---DLIKTIKFKNDIEETVGITLNTFL 302          
BLAST of DY306134 vs. ExPASy Swiss-Prot
Match: COQ9_SCHPO (Ubiquinone biosynthesis protein coq9, mitochondrial OS=Schizosaccharomyces pombe GN=coq9 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.421e-16
Identity = 56/178 (31.46%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  292 EQARVLEASLRHVAKHGWGEAAMIAGARDVGLSPSIIGSFPRKDAALVEFFMDDCLQRLIDRIDSGEDLKDLIP--SQRISKLVRIRLEMQAPYISKWPQALSIQAQPLNVPTSFKQRAMLVDEIWHAVGDEASDIDWYVKRTVLGGIYSTTEIYMLTDSSPDFCDTSRFLDDRVRDA 819
            ++A +LE +L HV + G+ E A++ G + +G S      FP     L+ +F     QR    + S +     IP  S R+ +L+  RL+     +   PQ ++I   P N+  S    A L DEI +   D+++D  WY KR  +  IYS +E++M  D+SP+F  T  F+  R++ A
Sbjct:   47 KKALILENALEHVPQLGFTEDAIVQGGQALGYSNLSKALFPSGPMDLISYFF--LKQRYA--LSSLKPHLTTIPETSGRVVQLIWSRLQGNRDIVQHLPQMIAICTYPSNLRKSLSSLAELSDEILYLAQDKSADFQWYTKRAAISAIYSASELFMSRDTSPNFEATYNFVQHRIQHA 220          
The following BLAST results are available for this feature:
BLAST of DY306134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
COQ9_RAT5.214e-3537.39Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
COQ9_XENTR1.162e-3437.31Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
COQ9_MOUSE1.517e-3436.94Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
COQ9_HUMAN3.379e-3436.49Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
COQ9_BOVIN5.765e-3436.49Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
COQ9A_XENLA1.284e-3336.32Ubiquinone biosynthesis protein COQ9-A, mitochondr... [more]
COQ9B_XENLA2.861e-3336.32Ubiquinone biosynthesis protein COQ9-B, mitochondr... [more]
COQ9_DROME8.062e-2835.71Ubiquinone biosynthesis protein COQ9, mitochondria... [more]
COQ9_DICDI1.796e-2734.31Probable ubiquinone biosynthesis protein coq9, mit... [more]
COQ9_SCHPO5.421e-1631.46Ubiquinone biosynthesis protein coq9, mitochondria... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3CG10RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306134 ID=DY306134; Name=DY306134; organism=Citrus sinensis; type=EST; length=1237bp
ACGAACAAGATGTACAGAACGGCAGCGAAACGCCTACTCTCGCACCGTGT
GCCGTCGATTAACGTTAGCAGCGGCCGTACGCGATTACTCCCTAATCTCC
GTCAAATCACTTGCTCTTCTCGATTTTCCACTTCCACCGTAAATCCCCAA
TCAGGCCCTAATCATCAAGTCAACAATGAAGCCCCTAATTTCACGGATTC
CAAGACGACGTCGTCTTCGTCTGCTGCAGAGGAAGCTCGTGATGCTCGCA
GCCATAAGAGGGAGAGACCGAGAGTTGTGGAGTACCGAGACGAGCAGGCG
CGAGTGCTCGAGGCGTCTCTGCGCCACGTGGCGAAGCACGGATGGGGCGA
GGCGGCTATGATTGCAGGCGCAAGGGACGTTGGCTTGTCTCCTTCCATCA
TTGGATCTTTCCCCAGAAAGGACGCCGCTCTCGTTGAGTTTTTTATGGAT
GATTGCTTACAAAGGCTAATTGATAGAATTGACTCGGGGGAGGATTTAAA
GGACTTGATTCCGAGTCAGCGCATCTCGAAGCTGGTTCGAATTCGTCTGG
AAATGCAAGCGCCTTACATTTCTAAGTGGCCTCAGGCTCTTAGCATCCAA
GCTCAGCCATTGAATGTACCCACTAGTTTTAAACAGAGGGCAATGCTGGT
TGATGAGATTTGGCATGCTGTTGGGGATGAGGCTTCAGATATAGATTGGT
ATGTGAAGCGCACCGTCCTTGGAGGAATTTATTCCACAACTGAGATTTAC
ATGCTGACTGATAGTTCCCCAGATTTTTGTGACACATCGAGGTTCTTGGA
TGATCGAGTAAGAGATGCTTTTGATTTGAAGAAAACCTTTCAAGAAGCAA
CGTATTTGGCTGAAACTGTTGGTGCTGGAAATGGGGAATTTCTCGGCAGG
GGTTTGGTTAATAAATTATTTAAAAAAATGACGGGGCCGGGATTGGGAAG
TTTTCTGAGAATTTCTGTTCAAAACTCAATTTTGCCCCTTCCTTTTGGTT
AAGGACTGGGGTAACATATTGGGCCTCCTCCAAGGGGGGAATGCCTTCCT
AAGGGGGGGTGTAAAAACGGGGGAATTTCTTTATTTTTTTATTGTTTGTT
TGTTATTTTTAAAGAGAACCATATCCTGGTTTTTTCTTTTCTCGGCCCCA
AAATTCTCCTCCCCCCTTCTTGCGCCCCAAAAAAAAAAAAGTTTTTAAAA
AAGAAGAAGTGCTCACATTTTTTTTATGGGAAGAAGG
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