DY306132

Overview
NameDY306132
Unique NameDY306132
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.411e-29
Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGDAA 232
            LALSLEKL NEKL S+ SVADRN DPQ+ DF+ESEFL EQVEAI KI++YV+QLRMVGKGHGVWHFDQ LLH+G AA
Sbjct:  178 LALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.283e-28
Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGDAA 232
            LALSLEKLTNEKLL+L SVA +NND Q+ DF+ESEFLGEQVEAI KI++YV+QLR VGKGHGVWHFDQMLLHE   A
Sbjct:  179 LALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.086e-27
Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE-GDAA 232
            LALSLEKLTNEKLL+L SVA +N D Q+ DFVE+E+LGEQVEAI +I++YV+QLR VGKGHGVWHFDQMLLHE GDAA
Sbjct:  170 LALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.419e-27
Identity = 58/73 (79.45%), Postives = 66/73 (90.41%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE 220
            LALSLEKLTNEKLL + SVADRNND Q+ DF+ESEFL EQVE+I KIA+YV+QLR+VGKGHGVWHFDQ LLH+
Sbjct:  184 LALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.419e-27
Identity = 59/74 (79.73%), Postives = 66/74 (89.19%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEG 223
            LALSLEKLTNEKLL L SVA +N D Q+ DFVESEFLGEQVE+I +I++YV+QLR VGKGHGVWHFDQMLLHEG
Sbjct:  173 LALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.853e-27
Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGD 226
            LALSLEKLTNEKLL + SVA+RNNDPQ  DF+ESEFL EQV++I KIA+YV+QLR+VGKGHGVWHFDQ LLH+ D
Sbjct:  181 LALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.420e-27
Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 217
            LALSLEKLTNEKLL++  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ Y++QLRM+GKGHGVWHFDQMLL+
Sbjct:  184 LALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.161e-27
Identity = 57/72 (79.17%), Postives = 65/72 (90.28%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 217
            LALSLEKLTNEKLL+L  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ +++QLRMVGKGHGVWHFDQMLL+
Sbjct:  183 LALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 9.196e-27
Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 214
            LALSLEKL NEKLL++ SVADRNNDPQM DF+ESEFL EQVE+I KI++YV+QLR VGKGHGVWHFDQ LL
Sbjct:  179 LALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of DY306132 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 119.783 bits (299), Expect = 9.196e-27
Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 2
Query:    2 LALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 214
            LALSLEKL NEKLL++ SVADRNNDPQM DF+ESEFL EQVE+I KI++YV+QLR VGKGHGVWHFDQ LL
Sbjct:  179 LALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
The following BLAST results are available for this feature:
BLAST of DY306132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
FRI_PHAVU4.411e-2979.22Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI3_SOYBN1.283e-2879.22Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI4_SOYBN1.086e-2778.21Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI3_VIGUN1.419e-2779.45Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI2_VIGUN1.419e-2779.73Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI2_SOYBN1.853e-2777.33Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_ARATH2.420e-2777.78Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_BRANA3.161e-2779.17Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI_MALXI9.196e-2780.28Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN9.196e-2780.28Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionKN0AAM3CG08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306132 ID=DY306132; Name=DY306132; organism=Citrus sinensis; type=EST; length=560bp
GCTAGCATTGTCCCTGGAGAAGCTAACAAACGAGAAGCTTCTGAGCCTGC
GCAGTGTGGCGGATAGAAACAATGATCCCCAAATGGGAGATTTTGTCGAG
AGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGATCGCTAAATA
TGTTTCTCAACTTAGGATGGTTGGGAAAGGCCACGGAGTATGGCACTTCG
ATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAGAACCATATTG
TTACATTTCTTTGTGGTTTAGTCAACTCTTTGCTGCTAAATGTTCTGAAG
TATCTCTGCCACAGGAGGTTGAATGTGTTGTCAAAAAATAAGCTGAAACA
GTGATAAGTCCTACAAAGTCAATACTCAATAGCCTCCTTGCTTTATCATA
TTAGTGTGGTCGCTTTTAGATAGTCTTTTTTATGGTGCTTTTTCTTTATT
TANTAACAGACAGTGTGAAGGGATCTAATAGTTTAAGCAGAGCACCAAAT
CCATCTTCTGATTGTATAAATATAATTAAGTTGTTCAATAAAAGTTCTGT
TTCTGCCCTG
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