DY306130

Overview
NameDY306130
Unique NameDY306130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1273
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 6.001e-34
Identity = 70/157 (44.59%), Postives = 104/157 (66.24%), Query Frame = 2
Query:    5 CFMLYPRSLFVTWGNR-DHWTWNCFKETSDENIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYEVKLTNAAFGWEAPVSLKLSLP-ADGKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEH-GGHWKSGLIIKAAILRPK 466
            CFML+ ++L +TW +  ++WTW   KE+ +EN+E V L +VCW+D+ GKF    L+PG++YE+V++VKL + A+GW+ PV+LKL LP    K Q ++VSL E PR +W ++ VG F+ E +  G     E+ F  +EH  G WK GL +K   +RPK
Sbjct:   94 CFMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAG-----EITFSMYEHAAGVWKKGLSLKGVAIRPK 245          
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: P2A04_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.387e-22
Identity = 61/158 (38.61%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   11 MLYPRSLFVTWGNRD-HWTWNCFKE--TSDENIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYEVKLTNAAFGWEAPVSLKLSLPADGK--VQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFE-HGGHWKSGLIIKAAILRPK 466
            M+Y R L + W ++D +W+W   +   +S++ ++   L  VCW+DV GKF   EL+    YE+VY VKL + A GW  PV+LKL+LP DGK   Q R + L E     W ++  G F+T  +N G     E+ F  +E     WK GL +K   +RPK
Sbjct:   13 MIYARDLSIAWSDKDEYWSWLPLRYDISSEKLVDAAVLEAVCWLDVNGKFDTRELTLETTYEVVYVVKLEDTASGWNIPVNLKLTLP-DGKKRPQERSMCLKEHIGKRWIDISAGEFVTSPDNAG-----EISFSMYETKSCCWKRGLFVKCVEIRPK 164          
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: P2A05_ARATH (Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.175e-19
Identity = 59/158 (37.34%), Postives = 82/158 (51.90%), Query Frame = 2
Query:    8 FMLYPRSLFVTWG-NRDHWTWNCF-KETSDENI-EVVKLSHVCWMDVRGKFKISELSPGVMYEIVYEVKLTNAAFGWEAPVSLKLSLPAD-GKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEHGGH-WKSGLIIKAAILRPK 466
            FM+  R L + W  + +HWTW     + S+E++ E+  L    W+DV GKF    L+P   YE+V+ VKL    F WE  V LKL LP    K Q + V + +    +W ++ VG F T   N G     E+ F  +EH    WKSGL +K   +RPK
Sbjct:  259 FMIDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTPRTRYEVVFVVKL-EYTFEWETLVKLKLDLPNTWEKPQEQSVDMFDYISDQWLDIPVGEFTTSKKNVG-----EISFAMYEHECQLWKSGLFVKGVTIRPK 410          
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.706e-17
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = 2
Query:   86 SDENIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYEVKLTNAAFGWEAPVSLKLSLP-ADGKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFE-HGGHWKSGLIIKAAILRPK 466
            SD   EV K+  V W++V GKF+  +L+P  +YE+V+ VKL ++A GW+  V+ KL LP  + K +   V+LLE  R +W E+  G F+    +     + ++ F   E     WKSGLI+K   +RPK
Sbjct:   71 SDVRTEVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETKERRENVNLLE--RNKWVEIPAGEFMISPEH----LSGKIEFSMLEVKSDQWKSGLIVKGVAIRPK 193          
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: P2A07_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis thaliana GN=PP2A7 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.658e-15
Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 2
Query:    2 KCFMLYPRSLFVTWGNR-DHWTWNCFKET-SDENIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYEVKLTNAAFGWEAPVSLKLS-LPADG--KVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEH-GGHWKSGLIIKAAILRP 463
            KCFM+  R L ++   +  +WTW+   ET +D  IEV  L+ V W+ + G F    L+PG  YE+V+ V L + + GWE PV+L L  +  DG   +Q R+ SL       W ++  G  +    N    + A++ F  +++     KSGL++K   +RP
Sbjct:  175 KCFMVPARKLQMSHSEKLINWTWSSIYETPNDAAIEVAMLNEVHWLHMSGNFHTRNLTPGTKYEVVFLVSLDDTSSGWEQPVNLNLKVINPDGTESLQERETSLECHIGENWVDIQAGVLVAPPRN----AAAKMTFTMYQYVTSDRKSGLVVKGVAIRP 330          
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: P2A06_ARATH (Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.627e-13
Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 2
Query:   11 MLYPRSLFVTWGNRDH-WTWNCFKETSDE-NIEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYEVKLTNAAFGWEAPVSLKLSL---PADGKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFEHGGHW-KSGLIIKAAILRP 463
            M+  R L +T   +   WTW+   E  +   IE+  L+ V W+ + G      L+PG  YE V+ VKL N A GWE PV+LKL +     D    +R  +L +     W ++  G F+         + A + F  +++   + K GL++K   +RP
Sbjct:  238 MVPARDLDITHSEKPQKWTWSTINEAPNSAEIEIATLNKVYWLKIVGTITTENLTPGAKYEAVFVVKLENNASGWEQPVNLKLKVVQHDGDDDRVDRTENLNDYIGQNWVDILAGVFVVPPKT----TPATIIFTMYQYEDKYKKKGLVVKGVAIRP 390          
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: P2A03_ARATH (Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.699e-12
Identity = 48/159 (30.19%), Postives = 72/159 (45.28%), Query Frame = 2
Query:   11 MLYPRSLFVTWGN-RDHWTWNCFKETSDEN--IEVVKLSHVCWMDVRGKFKISELSPGVMYEIVYEVKLTNAAFGWEAPVSLKL----SLPADGKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFE-HGGHWKSGLIIKAAILRP 463
            M+  R L + W +  +HW W         N  +EV +L  V W DV G    +E++P   YE+++ V L ++AF W A V + L    S P     Q R V + +     W  +  G F+T   N G      + F   E   G  + GLI+K  ++RP
Sbjct:  308 MICARDLNIEWSHSEEHWKWVNLDHNISSNTFVEVAELLGVYWFDVSGSLDTTEMAPWTHYEVLFVVNLKDSAFKWNAAVKMNLFYINSRPGGPGTQERAVDMRQHIGKGWVTIHAGEFITTPENVGL-----IGFRMSEVDSGDNRGGLIVKGVLIRP 461          
BLAST of DY306130 vs. ExPASy Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.466e-11
Identity = 54/174 (31.03%), Postives = 76/174 (43.68%), Query Frame = 2
Query:    2 KCFMLYPRSLFVTWGNR-DHWTWNCFKETSDENIEVVKLSHVCWMDVRGKFKISELSPGVMYE--IVYEVKLTNAAFGWEAPVSLKLSL--------------PAD--GKVQNRQVSLLEKPRGEWFELCVGNFLTETNNDGSESTAEVFFDFFE-HGGHWKSGLIIKAAILRP 463
            +C ML  + L++TWG+  ++W W    E+    I   +L  VCW ++RGK     LSPG  Y   IV++ K      G   PV + L L              P D  G+ + R V+  ++    W E  +G F  E   D      E+ F   E     WKSGLII+    RP
Sbjct:  152 RCIMLSSKELWITWGSSPEYWQWISIPESRFNKI--AELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLG-HLPVEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEFFNEERCD------EIEFSVIEIKSPSWKSGLIIQGIEFRP 316          
The following BLAST results are available for this feature:
BLAST of DY306130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
P2A01_ARATH6.001e-3444.59Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis th... [more]
P2A04_ARATH1.387e-2238.61Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 O... [more]
P2A05_ARATH4.175e-1937.34Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis th... [more]
P2A02_ARATH8.706e-1737.98Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis th... [more]
P2A07_ARATH3.658e-1533.13Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 O... [more]
P2A06_ARATH7.627e-1329.94Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis th... [more]
P2A03_ARATH1.699e-1230.19Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabi... [more]
FB95_ARATH5.466e-1131.03F-box protein At2g02240 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3CG03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306130 ID=DY306130; Name=DY306130; organism=Citrus sinensis; type=EST; length=1273bp
GAAATGCTTCATGCTGTATCCCAGGTCACTTTTTGTTACTTGGGGCAACC
GCGATCACTGGACTTGGAATTGCTTCAAAGAAACGAGTGATGAAAACATA
GAAGTGGTGAAACTAAGCCACGTATGCTGGATGGATGTAAGAGGCAAGTT
CAAGATATCAGAACTGTCCCCGGGGGTTATGTATGAGATCGTGTACGAGG
TGAAGTTGACAAATGCAGCATTTGGATGGGAAGCACCGGTCAGCCTCAAG
CTCTCACTGCCTGCCGATGGGAAAGTGCAGAATCGCCAAGTGAGCCTCTT
GGAGAAGCCCAGAGGAGAATGGTTTGAGCTCTGCGTCGGCAACTTCTTAA
CGGAGACTAATAATGATGGATCCGAAAGTACGGCTGAAGTTTTCTTTGAT
TTTTTTGAGCATGGAGGCCACTGGAAATCTGGACTCATTATTAAAGCTGC
CATTCTTAGGCCAAAAATTAACTGACAACTTTCATCGCGCTTCTTTCTAC
TCGTGTACTTGCTTGTGGCCGGCCGCCGGCCATGTTTAAGTTTTCATTTT
TTGTATTTTTTTATTTTTATTTTTTCATCCGTAACATCTGAATGTAAACT
ACGAAAATTANTGATAGATGTATGAAATATTTACGTTTTGATTANNANNN
NNNNNAAAAAAAAAAAAAAAAAAAAATAAAATAATAAAANAAAAATAAAA
AAATATATTTTTTCCCGGGGGGGGCCCCGAACCCAATTCCCCCTAAATGG
GTCCCATAAAAATTTACGGGCCCTTTTTTAAAAATCCTGGACGGGGAAAA
CCGGGCGTTTCCGCGCCTTAACCCCCCTAAACACATCCCCCTTTTCCCCC
CCGGGGATAAAACCCAAAACCCCGCCCAACTTCCCCCCTCTCCACAGGGT
CCCCCCCGGGAAGGGGAGAAAGGGAAATGTGAAGCCGTGAAATTTTGTGT
GAAAATCCGCGGAAAATTTGTTGGTAAAATGCCCCCCATTTTTGACCACA
AGAGGCCCGAAAAGGGGAAGAATCCCCTTTAAAAAAAGAAAGAAAAAAAA
AGCGGTGAAAGAGGGATTATAAGGTTTTTTCCCCGCTGGTGAGCCACAGA
CAACTTCCTAAGTCTGTGGAAGGTGCGGTGGTATCCACAGCGCGTCATGG
GAGGGCTGAAAGGAGAAATCCACTTTACGATGGGGCGGGACTAAACGGCA
CCGTAATTCATGGGTCGGGGAGCAGTACAATCGGCTGCCGCCGTCAGACT
ATGAGAATAATAAATGTCATGAC
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