DY306128

Overview
NameDY306128
Unique NameDY306128
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1165
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306128 vs. ExPASy Swiss-Prot
Match: TXLNB_HUMAN (Beta-taxilin OS=Homo sapiens GN=TXLNB PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 7.977e-14
Identity = 44/144 (30.56%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  465 ENTETRRKSSKRTFKSEKEFLEFTLKYQQVLAERDAAMAVRDKLESLCRELQRQNKMLMDECKRVSSEGQNLRLDLSAKFQDAIKDVSIKLEEQKDDCLSQLKENEMLRTNLKQLADQYCLTEQQYAQKVKQKTLELRMLI*KL 896
            E  +  R   K+    +K+ ++   +  Q+  E   A+  R KLESLCRELQR NK L +E  + + E +  R ++++ FQ  + D+  ++E+Q +  +   +EN  L   LK + DQY L E+   +  K + L+ +++  KL
Sbjct:  171 ELLDEHRTEQKKLKLLQKKQVQIQKEKDQLQGEHSRAILARSKLESLCRELQRHNKTLKEEALQRAREEEEKRKEITSHFQSTLTDIQGQIEQQSERNMKLCQENTELAEKLKSIIDQYELREEHLDKIFKHRELQQKLVDAKL 314          
BLAST of DY306128 vs. ExPASy Swiss-Prot
Match: TXLNB_MOUSE (Beta-taxilin OS=Mus musculus GN=Txlnb PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.042e-13
Identity = 45/138 (32.61%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  507 KSEKEFLEFTLKYQ--------QVLAERDAAMAVRDKLESLCRELQRQNKMLMDECKRVSSEGQNLRLDLSAKFQDAIKDVSIKLEEQKDDCLSQLKENEMLRTNLKQLADQYCLTEQQYAQKVKQKTLELRMLI*KL 896
            ++E++ L+  LK Q        Q+ +E + A+  R KLESLCRELQR NK L +E  + + E +  R ++++ FQ  + D+  ++E+Q +  +   +EN  L   LK + DQY L E+   +  K + L+ +++  KL
Sbjct:  180 RTEQKKLKLLLKQQAQTQREKDQLQSEHNRAVLARSKLESLCRELQRHNKTLKEETLQRAREEEEKRKEITSHFQTTLTDIQTQIEQQSERNMKLCQENTELAEKLKSIIDQYELREEHLDKIFKHRELQQKLVDAKL 317          
BLAST of DY306128 vs. ExPASy Swiss-Prot
Match: TXLNB_CHICK (Beta-taxilin OS=Gallus gallus GN=TXLNB PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.361e-13
Identity = 45/144 (31.25%), Postives = 75/144 (52.08%), Query Frame = 3
Query:  465 ENTETRRKSSKRTFKSEKEFLEFTLKYQQVLAERDAAMAVRDKLESLCRELQRQNKMLMDECKRVSSEGQNLRLDLSAKFQDAIKDVSIKLEEQKDDCLSQLKENEMLRTNLKQLADQYCLTEQQYAQKVKQKTLELRMLI*KL 896
            E  E  R   K+    +K   + T +  Q+ +E   A+  R KLESLCRELQR NK L +E  + + E    R +++  FQ  + ++  ++E+Q +  +   +EN  L   LK + DQY L E+   +  K + L+ +++  KL
Sbjct:  169 ELLEEHRAEQKQLKYLQKRQAQITKEKDQLQSEHSRAILARSKLESLCRELQRHNKTLKEETIQRAREEDEKRKEITNHFQGTLSEIQAQIEQQSERNMKLCQENTELAEKLKSIIDQYELREEHLDKIFKHRELQQKLVDAKL 312          
BLAST of DY306128 vs. ExPASy Swiss-Prot
Match: TXLNA_MOUSE (Alpha-taxilin OS=Mus musculus GN=Txlna PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.965e-12
Identity = 44/144 (30.56%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  465 ENTETRRKSSKRTFKSEKEFLEFTLKYQQVLAERDAAMAVRDKLESLCRELQRQNKMLMDECKRVSSEGQNLRLDLSAKFQDAIKDVSIKLEEQKDDCLSQLKENEMLRTNLKQLADQYCLTEQQYAQKVKQKTLELRMLI*KL 896
            E  E  R S K+    +K+  +   +   +  E   A+  R KLESLCRELQR N+ L +E  + + E +  R ++++ FQ  + D+ +++E+  +      +EN  L   LK+L +QY L E+   +  K K L+ +++  KL
Sbjct:  198 ELLEEHRNSQKQMKLLQKKQSQLVQEKDHLRGEHSKAVLARSKLESLCRELQRHNRSLKEEGVQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIEQYELREEHIDKVFKHKDLQQQLVDAKL 341          
BLAST of DY306128 vs. ExPASy Swiss-Prot
Match: TXLNA_HUMAN (Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.965e-12
Identity = 44/144 (30.56%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  465 ENTETRRKSSKRTFKSEKEFLEFTLKYQQVLAERDAAMAVRDKLESLCRELQRQNKMLMDECKRVSSEGQNLRLDLSAKFQDAIKDVSIKLEEQKDDCLSQLKENEMLRTNLKQLADQYCLTEQQYAQKVKQKTLELRMLI*KL 896
            E  E  R S K+    +K+  +   +   +  E   A+  R KLESLCRELQR N+ L +E  + + E +  R ++++ FQ  + D+ +++E+  +      +EN  L   LK+L +QY L E+   +  K K L+ +++  KL
Sbjct:  198 ELLEEHRNSQKQMKLLQKKQSQLVQEKDHLRGEHSKAVLARSKLESLCRELQRHNRSLKEEGVQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIEQYELREEHIDKVFKHKDLQQQLVDAKL 341          
BLAST of DY306128 vs. ExPASy Swiss-Prot
Match: TXLNG_HUMAN (Gamma-taxilin OS=Homo sapiens GN=TXLNG PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 7.466e-12
Identity = 47/150 (31.33%), Postives = 78/150 (52.00%), Query Frame = 3
Query:  447 KTENQLENTETRRKSSKRTFKSEKEFLEFTLKYQQVLAERDAAMAVRDKLESLCRELQRQNKMLMDECKRVSSEGQNLRLDLSAKFQDAIKDVSIKLEEQKDDCLSQLKENEMLRTNLKQLADQYCLTEQQYAQKVKQKTLELRMLI*KL 896
            K  + LE + + +K  K   K + + ++  +  Q   +E   A+  R KLESLCRELQR NK L +E  + + E +  R + +A FQ  + ++  +LE+         +EN  L   LK+L +QY L E+   +  K K L+ +++  KL
Sbjct:  162 KYADLLEESRSVQKQMKILQKKQAQIVKEKVHLQ---SEHSKAILARSKLESLCRELQRHNKTLKEENMQQAREEEERRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLIEQYALREEHIDKVFKHKELQQQLVDAKL 308          
BLAST of DY306128 vs. ExPASy Swiss-Prot
Match: TXLNG_MOUSE (Gamma-taxilin OS=Mus musculus GN=Txlng PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.751e-12
Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 3
Query:  447 KTENQLENTETRRKSSKRTFKSEKEFLEFTLKYQQVLAERDAAMAVRDKLESLCRELQRQNKMLMDECKRVSSEGQNLRLDLSAKFQDAIKDVSIKLEEQKDDCLSQLKENEMLRTNLKQLADQYCLTEQQYAQKVKQKTLELRMLI*KL 896
            K  + LE +   +K  K   K + + ++  +  Q   +E   A+  R KLESLCRELQR NK L +E  + + E +  R + +A FQ  + ++  +LE+         +EN  L   LK+L +QY L E+   +  K K L+ +++  KL
Sbjct:  162 KYADLLEESRNVQKQMKILQKKQAQIVKEKVHLQ---SEHSKAILARSKLESLCRELQRHNKTLKEENMQQAREEEERRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLIEQYALREEHIDKVFKHKELQQQLVDAKL 308          
The following BLAST results are available for this feature:
BLAST of DY306128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
TXLNB_HUMAN7.977e-1430.56Beta-taxilin OS=Homo sapiens GN=TXLNB PE=1 SV=3[more]
TXLNB_MOUSE1.042e-1332.61Beta-taxilin OS=Mus musculus GN=Txlnb PE=2 SV=2[more]
TXLNB_CHICK1.361e-1331.25Beta-taxilin OS=Gallus gallus GN=TXLNB PE=2 SV=1[more]
TXLNA_MOUSE1.965e-1230.56Alpha-taxilin OS=Mus musculus GN=Txlna PE=2 SV=1[more]
TXLNA_HUMAN1.965e-1230.56Alpha-taxilin OS=Homo sapiens GN=TXLNA PE=1 SV=3[more]
TXLNG_HUMAN7.466e-1231.33Gamma-taxilin OS=Homo sapiens GN=TXLNG PE=1 SV=2[more]
TXLNG_MOUSE9.751e-1231.33Gamma-taxilin OS=Mus musculus GN=Txlng PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3CF12RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306128 ID=DY306128; Name=DY306128; organism=Citrus sinensis; type=EST; length=1165bp
TGCCAATTCGGCACGAGGGCACTCTGAAATCTGAGTTTCTTCGTTCAATC
TTTTGAGTAATGGAGAGCCAAACTGCAAATCAGCTGCCTGAAGCAAATAC
ATTACCCGATGGGTTCGTTGATAGCTCCGCAGAGGATCTGGCTCTGCTAA
CCCCGAATGTGGAACAAGAAAAGCCTCATGGTGATTACAAGGAGGGTTTT
GCAGGACTAGGTGATTCTAGTGAGTCTAGGCATGAGTTTGCATCGAAAGA
GTTTCAAACAAGCGAGGAAGTGCCCAGTAAGGGTTCTGTGGAACAGAGAG
AGAGTGCGGTCATCAATCCTAATTCAGCTGCTGTCTCTGAGGCTTCGGCT
GGGGCATCTGGATGCTGTAAGCCACTGAAGAACGATCTGAAGCACAAGGG
ATCATTAAGAAGGATGTTTCAGTGTCAGAAAGTGATGATACTCTGAAAAA
CAGAAAACCAGTTAGAAAATACTGAAACCCGACGTAAGAGTTCAAAGCGC
ACCTTTAAATCTGAAAAGGAATTTCTTGAGTTCACTCTAAAATATCAGCA
AGTTCTTGCTGAAAGAGATGCAGCGATGGCTGTTAGAGATAAACTGGAGT
CGCTGTGCAGAGAGTTGCAACGCCAGAATAAAATGCTAATGGATGAGTGC
AAACGAGTATCATCAGAGGGGCAGAACCTGAGATTAGACTTGTCGGCCAA
GTTCCAAGATGCAATTAAGGATGTTAGCATTAAGCTAGAAGAACAAAAGG
ATGACTGTCTTTCTCAACTAAAGGAGAACGAGATGCTGAGGACTAATCTG
AAGCAGCTAGCTGATCAGTATTGCCTTACTGAACAACAATATGCACAGAA
AGTAAAGCAAAAAACACTGGAACTTCGAATGCTGATTTGAAAATTAACAA
CATGGAGGAGAAATTATTTCAGGACCAGTCCCAAATGAAATTGGATGGCC
GAACAAGGGTCACAATTCCGGGCTACCCGAAAAGAATTTGCGCTTGGCAT
TTGAGGGCTGAAGGGCAAAAAGTTCCACAAATTCCGGGAAGGCTTTGGTA
AAAAAAACAAGGGGGGTTTTTAAAAAAATTTAAAACAAAAAAATTTGAAA
AAAAAGGGGAAAAATCAATTCCAAGGGGAACCCAAAGAAAAGGGGAAAAA
CCGCGGGTCTTTTTT
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