EY702757

Overview
NameEY702757
Unique NameEY702757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.129e-96
Identity = 181/267 (67.79%), Postives = 204/267 (76.40%), Query Frame = 3
Query:   87 IGVKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFXXXXXXXXXXXXXXXXXXXNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL*RWKAS*KP-G*NLIDPFGHTWL 884
            +GV EMLG PLN  +  R+SAP AS+PSTFK VALF                   ++ELAKWYGPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV AV+AE+VL+GGAEYYRITNGLD EDKLHP GPFDPLGLAKDP+Q ALLK +      L     L  F++A    +   +    +L DPFG+  L
Sbjct:    4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSET---SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLL 267          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.080e-38
Identity = 87/191 (45.55%), Postives = 113/191 (59.16%), Query Frame = 3
Query:  267 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNG----LDLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            ++YGPDR  FL  G    ++ PEYLTGE PGDYG+D  GLS  P  F++Y+  ELIHARWA+LGA G + PE  +++      E VWFK GA +     LNY G    I   +++  +  ++VL+G AE YR   G    LD  D L+P GPFDPLGLA DPD FA LK +      L    CL  F++A+
Sbjct:   32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAI 220          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.317e-33
Identity = 81/189 (42.86%), Postives = 105/189 (55.56%), Query Frame = 3
Query:  267 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            +WYGPDR  +L       +  P YLTGE PGDYG+D  GLS  P+ F KY+  E+IHARWA+LGA G + PE  + +      E VWFK GA +     L+Y G    I   N+V  +  ++VL+G  E YR+  G   E  D L+P   FDPLGLA DPD FA LK +      L    C   F++A+
Sbjct:   38 EWYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAI 223          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.952e-33
Identity = 80/188 (42.55%), Postives = 109/188 (57.98%), Query Frame = 3
Query:  270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            WYGPDR ++L        E P YLTGE PGDYG+D  GLS  P++F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK GA +     L+Y G    +    + A+ A +++L+G  E YRI  G   ++ D ++P G FDPLGLA+DP+ FA LK +      L        F++A+
Sbjct:   58 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 241          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.952e-33
Identity = 84/188 (44.68%), Postives = 109/188 (57.98%), Query Frame = 3
Query:  270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            WYGPDR ++L  G L   E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    I    + A+ A ++VL+G  E YRI  G   ++ D L+P G FDPLGLA DP+ F  LK +      L  L     F++A+
Sbjct:   49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAI 232          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.162e-33
Identity = 81/188 (43.09%), Postives = 109/188 (57.98%), Query Frame = 3
Query:  270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            WYGPDR ++L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK GA +     L+Y G  + I    + A+ A +++L+G  E YR+  G   ++ D ++P G FDPLGLA DPD FA LK +      L        F++A+
Sbjct:   62 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAI 245          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.805e-33
Identity = 81/188 (43.09%), Postives = 108/188 (57.45%), Query Frame = 3
Query:  270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ FSK +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    +    + A+ A +++L+G  E YRI  G   ++ D L+P G FDPLGLA DP+ FA LK +      L        F++A+
Sbjct:   52 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 235          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.805e-33
Identity = 81/188 (43.09%), Postives = 108/188 (57.45%), Query Frame = 3
Query:  270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ FSK +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    +    + A+ A +++L+G  E YRI  G   ++ D L+P G FDPLGLA DP+ FA LK +      L        F++A+
Sbjct:   53 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 236          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.150e-32
Identity = 81/188 (43.09%), Postives = 107/188 (56.91%), Query Frame = 3
Query:  270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE F + G   G EAVWFK G+ +     L+Y G    +    + A+ A ++VL+G  E YR+  G   ++ D L+P G FDPLGLA DP+ FA LK +      L        F++A+
Sbjct:   50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAI 233          
BLAST of EY702757 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.502e-32
Identity = 82/188 (43.62%), Postives = 108/188 (57.45%), Query Frame = 3
Query:  270 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPCGPFDPLGLAKDPDQFALLK*RRSTMENLPCLPCLDSFLKAL 818
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE  ++ G   G EAVWFK G+ +     L+Y G    I    + A+ A ++VL+G  E YRI  G   ++ D L+P G FDPLGLA DP+ FA LK +      L        F++A+
Sbjct:   46 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAI 229          
The following BLAST results are available for this feature:
BLAST of EY702757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
CB26_ARATH1.129e-9667.79Chlorophyll a-b binding protein CP26, chloroplasti... [more]
CB2_DUNTE4.080e-3845.55Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB2_CHLMO2.317e-3342.86Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB2B_PINSY3.952e-3342.55Chlorophyll a-b binding protein type 2 member 1B, ... [more]
CB22_MAIZE3.952e-3344.68Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB2A_PINSY5.162e-3343.09Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB28_PEA8.805e-3343.09Chlorophyll a-b binding protein 8, chloroplastic O... [more]
CB22_PEA8.805e-3343.09Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB24_PETSP1.150e-3243.09Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB21_MAIZE1.502e-3243.62Chlorophyll a-b binding protein 1, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-011-H06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702757 ID=EY702757; Name=EY702757; organism=Citrus sinensis; type=EST; length=884bp
ATTTCATTTCTCTAACACAAAGAAGCAGCAGCAGCAACACTCTGAAGATG
GCTTCATTGGCAGCATCGTCCACTCCTGCTGCCTCCATTGGAGTTAAGGA
GATGCTTGGCAACCCTCTCAATGTCAGCAGTGCTGTTAGGACTTCAGCTC
CAGGTGCATCAAACCCTTCTACTTTCAAGCCCGTTGCTCTCTTCTCCAAG
AAGAAAGCCGCCCCTCCTGCCAAGTCTAAGCCCGTCGCCGTCTCCCCCGT
TAACGAAGAGCTCGCCAAGTGGTATGGTCCTGACCGAAGAATTTTCTTGC
CCGAGGGTCTCTTGGACAGATCTGAGATCCCTGAGTACTTGACCGGAGAA
GTTCCCGGAGACTATGGTTACGATCCTTTTGGTCTCAGCAAGAAACCAGA
CGACTTCAGCAAATATCAGGCATATGAATTGATTCATGCCAGATGGGCCA
TGCTTGGTGCTGCTGGTTTCATCATTCCTGAAGCCTTTAACAAGTTTGGT
GCTAACTGTGGTCCTGAAGCTGTCTGGTTCAAGACTGGAGCTCTACTTCT
TGATGGAAACACATTGAACTACTTCGGAAAGAACATCCCAATCAACCTTG
TTTTTGCTGTCATTGCTGAGATTGTTCTTGTAGGTGGTGCTGAATATTAT
AGAATCACCAACGGTTTGGATTTGGAGGACAAGCTTCACCCATGTGGCCC
ATTTGACCCACTGGGATTAGCAAAGGATCCTGACCAATTTGCTTTGCTAA
AGTGAAGGAGATCCACCATGGAAAACTTGCCATGTTTGCCATGCTTGGAT
TCTTTCCTCAAGGCTTTGTAACGGTGGAAGGCCAGCTGAAAACCTGGGTA
AAATCTCATTGATCCTTTTGGCCACACTTGGCTA
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