DY306116

Overview
NameDY306116
Unique NameDY306116
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1297
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306116 vs. ExPASy Swiss-Prot
Match: DGDG2_ARATH (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DGD2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42
Identity = 91/183 (49.73%), Postives = 115/183 (62.84%), Query Frame = -2
Query:  172 ARR*STLGAELFPESDSGRQSFWLKLSCCTNASPTCFVCPPSSHALASGNFLVCANHPSNDFFKQFPNCRT*DDRNGFVEATMKXXXXXXXXXXXAQRHQLSWESATERFLQVFELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGL 720
            A R   L   ++P  D    S +       N S T  VC  ++ ALA G  +VCANH SN FFKQFPNCRT DD  GFV AT+K            QRH+LSWE+AT+RF++V +L++             FAS+S+++ KN+E+ SAY+HFLASGFE SR AFGAIPGSL PDEELC++LGL
Sbjct:  279 AARKLDLTVNVYPGRDHA-DSLFHNYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATLKALGEQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNLEDMSAYIHFLASGFEASRTAFGAIPGSLQPDEELCRDLGL 460          
BLAST of DY306116 vs. ExPASy Swiss-Prot
Match: DGDG2_SOYBN (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max GN=DGD2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 7.512e-40
Identity = 87/159 (54.72%), Postives = 107/159 (67.30%), Query Frame = -2
Query:  154 NASPTCFVCPPSSHALASGNFLVCANHPSNDFFKQFPNCRT*DDRNGFVEATMKXXXXXXXXXXXAQRHQLSWESATERFLQVFELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTPMSK 630
            N S T  VC  ++ ALA G  +VCANHPSNDFFKQFPNC T DD +GFV+ T+K           AQRH LSWE+AT+RFL+  +LD+  +         +F + SLNL++ ++EASAYVH +ASGFE SRR FGAIP SL PDEEL KELGL    +K
Sbjct:  306 NPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDGFVKLTLKALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKP-LERKLSRTTSNFLAASLNLQEKVDEASAYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLTDASTK 463          
BLAST of DY306116 vs. ExPASy Swiss-Prot
Match: DGDG2_LOTJA (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus japonicus GN=DGD2 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.122e-38
Identity = 85/153 (55.56%), Postives = 102/153 (66.67%), Query Frame = -2
Query:  172 NASPTCFVCPPSSHALASGNFLVCANHPSNDFFKQFPNCRT*DDRNGFVEATMKXXXXXXXXXXXAQRHQLSWESATERFLQVFELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGL 630
            N S T  VC  ++ ALA G  +VCANH SN+FFKQFPNC T D+  GFV+  +K           AQRH LSWE+ATERFL+  ELD+             + STSLNL++ +++ASAYVH +ASGFE SRR FGAIPGSL PDEEL KELGL
Sbjct:  306 NPSTTDVVCTTTAEALAMGKIVVCANHCSNEFFKQFPNCWTFDESKGFVQLILKALAEEPAQLTDAQRHDLSWEAATERFLKAAELDKPFEKKLSRSTSI-YMSTSLNLQQTVDDASAYVHHVASGFEISRRMFGAIPGSLKPDEELSKELGL 457          
BLAST of DY306116 vs. ExPASy Swiss-Prot
Match: DGDG1_SOYBN (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max GN=DGD1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.473e-19
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = -2
Query:  163 NASPTCFVCPPSSHALASGNFLVCANHPSNDFFKQFPNCRT*DDRNGFVEATMKXXXXXXXXXXXAQRHQLSWESATERFLQVFELD-------QAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 630
            N S +  +C  ++ ALA G F+VCA+HPSN+FF+ FPNC T      FV    +            QR+QLSWE+AT+RF++  ELD                      +++  NL + ++   A+ H+  +G E  R   GAIPG+   D++ CK+L L+ P
Sbjct:  612 NPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYRTSEDFVTKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDGILNKENNGEKSRVDKGKLIAKSASMPNLTELVDGGLAFAHYCLTGNEFLRLCTGAIPGTRDYDKQHCKDLHLLPP 774          
BLAST of DY306116 vs. ExPASy Swiss-Prot
Match: DGDG1_LOTJA (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.512e-19
Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = -2
Query:  163 NASPTCFVCPPSSHALASGNFLVCANHPSNDFFKQFPNCRT*DDRNGFVEATMKXXXXXXXXXXXAQRHQLSWESATERFLQVFELDQAV------VXXXXXXXXKHFASTSL-NLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 630
            N S +  +C  ++ ALA G F+VCA+HPSN+FF+ FPNC T      F     +            QR+QLSWE+AT+RF++  ELD+ +                   S S+ NL + ++   A+ H+  +G E  R   GA PG+   D++ CK+L L+ P
Sbjct:  615 NPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTPEDFAVKVKEALANEPYPLTPEQRYQLSWEAATQRFMEYSELDKVLNKEKDGAKPSKNNRKIMAKSASMPNLTELVDGGLAFAHYCLTGNEFLRLCTGATPGTRDYDKQHCKDLNLLPP 777          
BLAST of DY306116 vs. ExPASy Swiss-Prot
Match: DGDG1_ARATH (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.379e-17
Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = -2
Query:  163 NASPTCFVCPPSSHALASGNFLVCANHPSNDFFKQFPNCRT*DDRNGFVEATMKXXXXXXXXXXXAQRHQLSWESATERFLQVFELDQAVVXXXXXXXXKHFASTSLNLKKNMEEASAYVHFLASGFETSRRAFGAIPGSLHPDEELCKELGLVTP 630
            N S +  +C  ++ ALA G F+VCA+HPSN+FF+ FPNC T      FV    +            Q + LSWE+AT+RF++  +LD+ ++           + +  +  + ++   A+ H++ +G +  R   GA P +   D + CK+L LV P
Sbjct:  645 NPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVSKVQEAMTKEPLPLTPEQMYNLSWEAATQRFMEYSDLDK-ILNNGEGGRKMRKSRSVPSFNEVVDGGLAFSHYVLTGNDFLRLCTGATPRTKDYDNQHCKDLNLVPP 799          
The following BLAST results are available for this feature:
BLAST of DY306116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DGDG2_ARATH8.026e-4249.73Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG2_SOYBN7.512e-4054.72Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG2_LOTJA4.122e-3855.56Digalactosyldiacylglycerol synthase 2, chloroplast... [more]
DGDG1_SOYBN1.473e-1934.36Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
DGDG1_LOTJA2.512e-1934.36Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
DGDG1_ARATH1.379e-1731.41Digalactosyldiacylglycerol synthase 1, chloroplast... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3CE08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306116 ID=DY306116; Name=DY306116; organism=Citrus sinensis; type=EST; length=1297bp
AGAAGAAAAGATTTTTCATTTGCAATTTCTAACTTCATTAGAACTTCAAG
TACAAAAGAATTCAATGAACCCATACACGCTACACTTTCTAGGCTTTCAA
GTATACAATATTTGAACAAACTACTTTTTAGAACCAACATTTTTTCAGCC
TTGCTTGCTCATAGGGGTTACCAACCCAAGTTCTTTGCATAGCTCTTCGT
CCGGATGCAAGCTCCCAGGAATTGCACCGAATGCTCTTCTCGATGTTTCA
AATCCAGATGCTAAAAAATGCACATAAGCTGAAGCCTCCTCCATGTTTTT
CTTCAAATTTAATGATGTGGATGCAAAGTGCTTTGAAGGACTTTTCGATG
GTTTCTTCACAACAGCCTGGTCCAGCTCAAAAACTTGCAGAAACCGTTCT
GTAGCAGACTCCCATGACAGTTGATGCCTCTGTGCTTCAGTTGGTAGAGC
AGGCTCTTCAGCAAGTGCTTTCATTGTGGCTTCAACAAACCCATTTCTGT
CATCTTAAGTTCGGCAATTTGGGAATTGCTTGAAGAAGTCATTTGAGGGG
TGGTTGGCACACACAAGGAAGTTTCCCGAGGCGAGAGCATGCGATGAGGG
GGGGCAAACAAAACAGGTGGGGCTCGCATTCGTGCAGCAACTCAATTTTA
ACCAAAAAGATTGTCGCCCTGAGTCACTTTCAGGAAATAATTCGGCCCCT
AGCGTGGACTATCTCCGCGCACTTCANGTATTGCTCTTAAGTCTCAGCTT
ATCNCCAAAATAATNACAAANTCGCGCCACTCTCCAAAAAAGNNGAAAGA
CAGGAGAAANAGGGCCGGGGGGGTCTTCGAGCAGACTGCGGAANCAGCAC
GGAGCAANAGAAATGGGTCAAGATGCTAGAATAATAGGTAACCGTTTCGT
TTNNNTGATAGAGNGAGTAAGTAATAAAAAAAAGCATATGAAAAAAAACG
NCANAAAAGGAGGANCAAACGACCACGTAGTGGAAAAGANNAATGAGCCA
ACCAGGTACGAANGNCAANAAGGAGTGANGCNATAAAAAAGAGTTAACTG
AAGAAGTAGAAAAAAGTACAATCTGGAAGTATGACGAGATGAATATGACG
GCTAAATGAGGAGCACGTAAAGAATCGAATATGAAANGTGTGATGTAGAG
TAAAGAGTAAATATGTGTGCTAGTAGAACAATGTGGACATACAGCTAGAA
ACACCTAGGACAGATGATATTGNGNATGAGCGCTGTCTGGGGTCACATGT
TTGTTGACGAGCACGAGAGTGGCACAAGCTCTAAGCACCGGGTGAAA
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