DY306112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 5.521e-95 Identity = 172/191 (90.05%), Postives = 182/191 (95.29%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 574 PGLQGGPHNHTITGL+VALKQATT EYKAYQEQV++NC+KFA+TL++ GYELVSGGTENHL+LVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAY FD AVKLAVKIK E QGTKLKDFVA QS+ FQSEI+KLRHDVEEYAKQFPTIGFEKETMKYKN Sbjct: 327 PGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSNCAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVAAMQSSAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 338.191 bits (866), Expect = 3.350e-92 Identity = 167/191 (87.43%), Postives = 180/191 (94.24%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 574 PGLQGGPHNHTITGL+VALKQATT EYKAYQEQV++N +KFA+TL++ GYELVSGGTENHL+LVNLKNKGIDGS+VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD AVKLAVKIK E +GTKLKDFV +S+ QSEI+KLRHDVEEYAKQFPTIGFEKETMKYKN Sbjct: 327 PGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAMESSAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 3.703e-91 Identity = 169/192 (88.02%), Postives = 181/192 (94.27%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQ-SANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 574 PGLQGGPHNHTITGL+VALKQATT EY+AYQEQVL+N SKFAQ L E GYELVSGGT+NHL+LVN+KNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVA FFDAAVK+AVK+K+ETQGTKLKDFVAT + SA +SEIAKLRHDVEEYAKQFPTIGFEKETMKYKN Sbjct: 327 PGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 7.722e-89 Identity = 163/192 (84.90%), Postives = 180/192 (93.75%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSAN-FQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 574 PGLQGGPHNHTITGL+VALKQATT EYKAYQEQVL+N +KFAQTL+E GYELVSGGT+NHL+LVNLK KGIDGSRVEKVLEAVHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA +FD AV +A+K+KSE QGTKLKDFV+ +S++ QSEIAKLRH+VEE+AKQFPTIGFEKETMKYKN Sbjct: 326 PGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.363e-85 Identity = 157/190 (82.63%), Postives = 176/190 (92.63%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANF-QSEIAKLRHDVEEYAKQFPTIGFEKETMKY 568 PGLQGGPHNHTITGL+VALKQATT EY+AYQEQVL+N SKFA+ L E GY+LVSGGTENHL+LVNLKNKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA +FDAAV LA+K+K+E++GTKLKDFV Q++++ QSEI+KL+HDVEE+AKQFPTIGFEK TMKY Sbjct: 327 PGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMKY 516
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.391e-51 Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET-QGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 544 PGLQGGPHNH I G++VALKQA T E+K YQ QV+ NC ++ L E+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F ++L ++I+S+T LK+F +Q+ + LR +VE +A FP G Sbjct: 298 PGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 479
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.859e-50 Identity = 97/182 (53.30%), Postives = 129/182 (70.88%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET-QGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 544 PGLQGGPHNH I G++VALKQA T E+K YQ QV+ NC ++ L E+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F ++L ++I+S+T LK+F +Q + LR VE +A FP G Sbjct: 298 PGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQGAVQALREKVESFASLFPLPG 479
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.142e-50 Identity = 99/184 (53.80%), Postives = 130/184 (70.65%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVA-TTQSANFQSEIAKLRHDVEEYAKQFPTIGFE 550 P LQGGPHNH I ++VALKQA T ++ Y Q+L N A LLE GY LVSGGT+NHL+LV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSRGF+E+DF KV F D V + +++KS+T TKL+DF + + ++A LR VE++A+ FP GF+ Sbjct: 321 PSLQGGPHNHAIAAVAVALKQACTPMFREYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKT--TKLQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGFD 502
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 195.282 bits (495), Expect = 3.507e-49 Identity = 99/184 (53.80%), Postives = 131/184 (71.20%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTK--LKDFVATTQSA-NFQSEIAKLRHDVEEYAKQFPTIG 544 PGLQGGPHNH I G++VALKQA T E++AYQ QV+ NC A+ L+ +GY +V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+ + G K LK+F+ A Q + LR +VE +A FP G Sbjct: 298 PGLQGGPHNHAIAGVAVALKQAMTPEFRAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQ-DAVGVKATLKEFMEKLAGAEEHQRAVTALRAEVESFATLFPLPG 480
BLAST of DY306112 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.580e-49 Identity = 98/187 (52.41%), Postives = 130/187 (69.52%), Query Frame = 2 Query: 2 PGLQGGPHNHTITGLSVALKQATTQEYKAYQEQVLNNCSKFAQTLLEMGYELVSGGTENHLLLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQG------TKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 544 PG QGGPHNHTI+ L+VALKQA T E+ YQ+QV++N F LL+ G+ELVSGGT+NHLLL+NL N GIDG+R+E +LE ++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF E+DF KVA + D AVKL++ +KS+ +KL F Q + + KL +V + FP G Sbjct: 300 PGHQGGPHNHTISALAVALKQAKTPEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLEAILEKINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQESADAKDVRSKLNSF---KQLCDQSEPVQKLAEEVSSWVGTFPVPG 483 The following BLAST results are available for this feature:
BLAST of DY306112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306112 ID=DY306112; Name=DY306112; organism=Citrus sinensis; type=EST; length=821bpback to top |