DY306109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306109 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 427.557 bits (1098), Expect = 8.011e-119 Identity = 212/291 (72.85%), Postives = 241/291 (82.82%), Query Frame = 2 Query: 2 LALPGPEEKSIVSSTMPTMAERNPSVVINPMPLPSPEKSSLAE---VRREIGKCEPIIEEPATPEQECTEITESDIEDAFY-EDPDEIPTIKLNIEEFTVNLQSYMQEKMELQECDMSKALVALNPDAASIPAPKLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGKLCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLTPIDVPREWLWNLPRRMVYFGTSVSSIFQGPSTE 862 LALP PEE+S+ S+T+P E P V I + LP P + SLA RE CEPIIEEPA+P QECTEITESDIEDA+Y EDPDEIPTIKLNIE+F + L+ +M+ MELQE DMSKALVAL+P SIP PKLKN+SRLRTEHQVYELPDSH LL+GMD+REPDDPSPYLLAIWTPGETANS Q PE +C K SGK+C ++TC CNS+RE NSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNE+FADH+SSL PIDVPR+W+W+LPRR VYFGTSV+SIF+G STE Sbjct: 1657 LALPAPEERSLTSATIPVPPESYPPVAIPMIELPLPLEKSLASGAPSNRE--NCEPIIEEPASPGQECTEITESDIEDAYYNEDPDEIPTIKLNIEQFGMTLREHMERNMELQEGDMSKALVALHPTTTSIPTPKLKNISRLRTEHQVYELPDSHRLLDGMDKREPDDPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDETCSECNSLREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLKPIDVPRDWIWDLPRRTVYFGTSVTSIFRGLSTE 1945
BLAST of DY306109 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 353.214 bits (905), Expect = 1.920e-96 Identity = 172/268 (64.18%), Postives = 210/268 (78.36%), Query Frame = 2 Query: 86 NPMPLPSPEKSSL---------AEVRREIGKCEPIIEEPATPEQECTEITESDIEDAFYEDPDEIPTIKLNIEEFTVNLQSYMQEKMELQECDMSKALVALNPDAASIPAPKLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGKLCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLTPIDVPREWLWNLPRRMVYFGTSVSSIFQGPSTE 862 NP+PL PE +E +++ CEPIIEEPA+PE E E++ +DIE+AF+EDP+EIPTI+LN++ FT NL+ M+ ELQ+ +MS ALVAL + AS+P PKLKN+S+LRTEH+VYELPD HPLL +++REPDDP YLLAIWTPGETA+SIQ S C + +G LCDE+TCFSCNS++ET SQ VRGT+LIPCRTAMRGSFPLNGTYFQVNEVFADH SSL PI+VPRE +W LPRR VYFGTSV +IF+G STE Sbjct: 1081 NPLPLHLPEPFQREQGSEVVQHSEPAKKVTCCEPIIEEPASPEPETAEVSIADIEEAFFEDPEEIPTIRLNMDAFTSNLKKIMEHNKELQDGNMSSALVALTAETASLPMPKLKNISQLRTEHRVYELPDEHPLLAQLEKREPDDPCSYLLAIWTPGETADSIQPSVSTCIFQANGMLCDEETCFSCNSIKETRSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHASSLNPINVPRELIWELPRRTVYFGTSVPTIFKGLSTE 1348
BLAST of DY306109 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 1.253e-71 Identity = 159/300 (53.00%), Postives = 185/300 (61.67%), Query Frame = 2 Query: 2 LALPGPEEKSIVSSTMPTMAERNPSVVINPMPLPSPEKSSLAEVRREIGKCEPIIEEPATPEQECTEITESDIED--------AFYEDP----DEIPTIKLNIEEFTVNLQSYMQEKMELQECDMSKALVALNPDAASIPAPKLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGK-LCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLTPIDVPREWLWNLPRRMVYFGTSVSSIFQGPSTE 862 LALP PEE S + + VV+N P + E +R CEPIIEEPA+PE E E DIED EDP D IPTI LN E T + + + +E S LV L+ AA+IP KLK +LRTEH V+ELPD H +LEG +RRE +D PYLLAIWTPGET NSIQ P+ RC ES LC+E CF CN RE SQTVRGT+LIPCRTAMRG FPLNGTYFQ NEVFADHDSS+ PIDVP E +W+L RR+ Y G+SVSSI +G S E Sbjct: 975 LALPEPEESDRTSVMIHERRSKRKPVVVNFRPSLFLYQEKEQEAQRS-QNCEPIIEEPASPEPE---YIEHDIEDYPRDKNNVGTSEDPWENKDVIPTIILNKEAGTSH------DLVVNKEAGTSHDLVVLSTYAAAIPRRKLKIKEKLRTEHHVFELPDHHSILEGFERREAEDIVPYLLAIWTPGETVNSIQPPKQRCALFESNNTLCNENKCFQCNKTREEESQTVRGTILIPCRTAMRGGFPLNGTYFQTNEVFADHDSSINPIDVPTELIWDLKRRVAYLGSSVSSICKGLSVE 1264
BLAST of DY306109 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 2.010e-53 Identity = 114/240 (47.50%), Postives = 155/240 (64.58%), Query Frame = 2 Query: 155 EPIIEEPATPEQECTEITESDIEDA----FYEDPDEIPTIKLNIEEFTVNLQSYM--QEKMELQECDMSKALVALNPDAASIPAP---KLKNVSRLRTEHQVYELPDSHPLLEGMDRREPDDPSPYLLAIWTPGETANSIQLPESRCRSKESGKLCDEKTCFSCNSMRETNSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLTPIDVPREWLWNLPRRMVYFGTSVSSIFQ 847 +P++E P++P E E T DIED Y+ +P I +++ +++ + +M + ++SKALV P+ A IP K+K +RLRTEH VY LPD+H LL +RR+ DDPSPYLLAIW PGET++S P+ +C S + KLC K C C ++RE NS RGT+LIPCRTAMRG+FPLNGTYFQ NEVFADH++SL PI RE L +R +Y G++V+SIF+ Sbjct: 756 KPLVEFPSSPRAEIPEST--DIEDVPFMNLYQSYASVPKIDFDLDALKKSVEDALVISGRMSSSDEEISKALVIPTPENACIPIKPPRKMKYYNRLRTEHVVYVLPDNHELLHDFERRKLDDPSPYLLAIWQPGETSSSFVPPKKKC-SSDGSKLCKIKNCSYCWTIREQNSNIFRGTILIPCRTAMRGAFPLNGTYFQTNEVFADHETSLNPIVFRRELCKGLEKRALYCGSTVTSIFK 992 The following BLAST results are available for this feature:
BLAST of DY306109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306109 ID=DY306109; Name=DY306109; organism=Citrus sinensis; type=EST; length=1287bpback to top |