DY306108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 271.166 bits (692), Expect = 5.229e-72 Identity = 127/183 (69.40%), Postives = 154/183 (84.15%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 550 EL HMVATAA IDDRPSCFR+PRGNGIG LPPN KG PLE+GKGR+L+EG+RVA+LGYGS VQ C+ AA++++ + VTVADARFCKPLD LIR+LA+ HE+L+TVEEGS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL I Sbjct: 532 ELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAI 714
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 268.47 bits (685), Expect = 3.389e-71 Identity = 129/181 (71.27%), Postives = 149/181 (82.32%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 544 +L +MVATA IDDRPSCFR+PRGNGIG LPP NKG P+EIGKGRIL EG+RVA+LGYGS VQ C+ AA ML+ + ++VTVADARFCKPLD LIR LA HE+LITVEEGS+GGFGSHV FL L G+LDG LK R MVLPDRYIDHG+PADQL E+GL HI+AT L+L+G P+EAL Sbjct: 536 DLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 9.862e-71 Identity = 126/181 (69.61%), Postives = 152/181 (83.98%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 544 EL H+VATAA IDDRPSCFR+PRGNGIG LP NKG PLE+GKGRIL+EG+RVA+LGYGS VQ C+ AA++L+S+ + VTVADARFCKPLD LIR LA HE+L+TVE+GS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL Sbjct: 535 ELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREAL 715
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.810e-48 Identity = 99/175 (56.57%), Postives = 127/175 (72.57%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 526 EL HMVATAA D P R+PRG G+G +P +G LEIGKGRI+ EG +VAIL G+ +++ +LAA L ++ +S TVADARF KP+D LIR+LA +HE+LITVEEGS+GGFGS+V HFL SG+LD LK+R MVLPD + D +PA Q +E+GL++RHI T L LG Sbjct: 458 ELKHMVATAAAYDHGPIAVRYPRGEGVGLEMP--ERGQVLEIGKGRIVKEGTKVAILSLGTRLKEALLAAEDLNARGLSTTVADARFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGLKVRPMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_MAGSA (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.001e-47 Identity = 96/181 (53.04%), Postives = 130/181 (71.82%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 544 +LMH VATA IDDRPS FR+PRG G+G L + +G+ + IGKGR++ EG+RVAIL G+ + + + AA+ L ++ ++ TV DARF KPLD +LI +LA EHE+LITVEEGSVGGFGSHV H L G LD LK+R + LPD +++H +PA Q E+ GL++ I ATVL+ LG + + Sbjct: 464 DLMHAVATAVSIDDRPSAFRYPRGEGVGIEL--SERGSVMPIGKGRVVREGNRVAILSLGTRLAEALKAADELAARGLAPTVVDARFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALDNGLKVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATVLATLGEARSVV 642
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=dxs PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.613e-47 Identity = 95/180 (52.78%), Postives = 127/180 (70.56%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 541 EL+HMVAT I+DRPS R+PRG G G +P + G PLEIGKGR++ +G++VA+L +G+ + +C AA L + +S TVADARF KPLD DL+ +LANEHEILIT+EEGS+GGFGSHV L+ G LDG +K+R+MVLPD ++DH +PA +GL ++ I V LG+ A Sbjct: 455 ELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLGLSTTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMRAMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_HYPNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=dxs PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.413e-47 Identity = 96/176 (54.55%), Postives = 124/176 (70.45%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL MV T+ IDDRPS R+PRG G+G V+P K PLEIGKGR++ EG +AIL YG+ +Q+ + AA ML +Q +S TVADARF KPLD +LI +LA EHE+L+T+EEGS GGFGS V L G LD LK+R M LPD + DH +PA +++GL++RHI+A + LGR Sbjct: 455 ELARMVLTSLEIDDRPSAVRYPRGEGVGVVIPDLLK--PLEIGKGRVVREGTSIAILSYGTRLQEALKAAEMLAAQGLSATVADARFAKPLDNELIERLAREHEVLVTIEEGSRGGFGSFVLEHLANCGGLDAGLKVRVMTLPDVFQDHDTPAAMYDQAGLTARHIAARAIEALGR 628
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.413e-47 Identity = 97/176 (55.11%), Postives = 123/176 (69.89%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 456 ELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.413e-47 Identity = 97/176 (55.11%), Postives = 123/176 (69.89%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 456 ELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGATGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DY306108 vs. ExPASy Swiss-Prot
Match: DXS_BRUC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.413e-47 Identity = 97/176 (55.11%), Postives = 123/176 (69.89%), Query Frame = 2 Query: 2 ELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 529 EL HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 456 ELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629 The following BLAST results are available for this feature:
BLAST of DY306108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 454
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Sequences
The
following sequences are available for this feature:
EST sequence >DY306108 ID=DY306108; Name=DY306108; organism=Citrus sinensis; type=EST; length=846bpback to top |