DY306100

Overview
NameDY306100
Unique NameDY306100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1275
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY306100 vs. ExPASy Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.461e-12
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1 
Query:  418 SNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRKKRRSSLFDMVADDMATD 666
            + ++   K+G  WT+EEH  FL G+Q  GKG W+ IA+ +V +RTPTQ+ SHAQKY++RQ   T+ KR  S+ D+   D+  D
Sbjct:  369 TGKKTSLKQG--WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SIHDLSLQDLIDD 446
The following BLAST results are available for this feature:
BLAST of DY306100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MYBJ_DICDI8.461e-1245.78Myb-like protein J OS=Dictyostelium discoideum GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM3CC08RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306100 ID=DY306100; Name=DY306100; organism=Citrus sinensis; type=EST; length=1275bp
GCGCACACCCTCTCTACCCCCTCAAAATTTCCAAGATAATTATAATTTAA
ATAGTCAATTTAATTAATTTATTAGAGATATCCGAATTTTATCGAGTCGC
GGCAGCGGTAACCGGCGATGACGCGGCGCTGCTCGCATTGCAGCAACAAC
GGGCACAACTCGCGAACGTGTCCCACGCGGGGCGGCGGCTCGTCGCCGGG
CGTGGGCGGCCTGAAGTTGTTTGGCGTCCGGCTTACGGATGGCTCGATAA
TCAAGAAGAGCGCGAGCATGGGGAACTTATCGGCGTTGCACTACCATAGC
TCCTCGTCGGCAGCCGCTTCGCCGAATCCTGACTCCCCGTTATCGGATCA
CGTGCGTGACCCGACTCACTTGACCGAAGGTTACTTGTCGGATGACCCAG
CGCACGGGTCTGGTTCATCGAATCGGCGTTGCGAGAGAAAGAAAGGTGTC
CCATGGACAGAAGAGGAGCATCGCCTGTTTCTAATTGGCCTTCAGAAATT
AGGGAAGGGAGACTGGCGTGGTATAGCACGAAATTATGTCATGTCCAGGA
CTCCAACCCAGGTGGCAAGTCATGCTCAGAAGTATTTTATCCGGCAGAGT
AATGCTACTCGAAAAAAGAGGCGCTCCAGTCTTTTTGACATGGTTGCGGA
TGATATGGCCACAGATACCCCACTGGTGCCAGAAGAGCAAATAATGCTTC
CACCTCCTCTTGCCAGAGAATCTGACCATAACAGCTCACAACCTTCTCTA
AATCTTTCTCTGAGTACCGAAATTGAACCCATGGGAAGCCGTATGGAAAG
AAACAAAAAAAGGATCTGAAAAACCCTGTGATTGTTTGGATGGATTCACC
CCAATGGGTGTCGCGTTTCTCCCCGCCTAAGATGCGATTCCCCTTTACTT
ATTTGGGCACTTAATGCAACCGCTGGGGGGAAAAAAAAAAGGATTCGGGG
AACCTCGCGGATGCGTCCGGGTGCCTTAGGCAGTTCCCCTTCCTGCCGAG
AAGAGCCGGGCCAGGGATGATGCACATGAGTAGGGATGGCCGCAAAGTGG
GTGATGAGGAAAGAGGGGCGAGGGAAGGAGCACGAAAGACCCTTTCCTGT
CTTTTTGCTCGATAGAAGTGACGGGGGACAAATATGGTCTAAGTGAACGG
CTTTACGTTGCTTACACAGATTGAAGGTAGCGGTGGCGCTTGTGGGGGGG
GGCTGCATGTGTTGGGTAGGCTGTAAGGCCCGCGGGCGAAAGAAAGACGG
CGCGAGGCCGCGGCGGGTAAGGGAG
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